Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8b02
(610 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006696-3|AAF39984.1| 391|Caenorhabditis elegans Hypothetical ... 203 7e-53
AL117205-8|CAB55167.1| 444|Caenorhabditis elegans Hypothetical ... 60 9e-10
AC024757-4|AAK68429.2| 371|Caenorhabditis elegans Methionine am... 41 8e-04
U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein. 30 1.1
AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess... 30 1.1
AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess... 30 1.1
Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical p... 30 1.5
Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical p... 30 1.5
Z75955-9|CAB00123.1| 406|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 28 4.5
Z82264-3|CAB05166.1| 277|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z74033-7|CAA98472.2| 325|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z50044-6|CAA90358.1| 223|Caenorhabditis elegans Hypothetical pr... 27 7.9
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 27 7.9
>AC006696-3|AAF39984.1| 391|Caenorhabditis elegans Hypothetical
protein W08E12.7 protein.
Length = 391
Score = 203 bits (496), Expect = 7e-53
Identities = 95/192 (49%), Positives = 132/192 (68%), Gaps = 3/192 (1%)
Frame = +2
Query: 41 TIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVFKKEKDS 220
T+A D VVTKY++A +I N VL++V+A A A ++C+ GDKL+LE+T K++KKEK+
Sbjct: 22 TLANDAVVTKYQVAAEITNAVLKEVLANIKEGAIAGDLCDLGDKLILEKTGKLYKKEKNF 81
Query: 221 KKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVG-- 394
KGIA TC+S++NCICH++P+ SE +LK G + K+DLG HIDG IA AHTVVVG
Sbjct: 82 TKGIAMPTCISIDNCICHYTPLKSEAPVVLKNGQVVKVDLGTHIDGLIATAAHTVVVGAS 141
Query: 395 -ESEVSGRAADVXXXXXXXXXXXXXXXKPGTENYAVTEAIQKISAEYGCKPIEGMLSHQL 571
+++V+G+ AD+ +P TEN +T+ I K +AE+G PIE MLSHQL
Sbjct: 142 KDNKVTGKLADLLRGTHDALEIAIRSLRPDTENTTITKNIDKTAAEFGLTPIENMLSHQL 201
Query: 572 KQFRIDGEKSII 607
++ IDGEK II
Sbjct: 202 ERNEIDGEKKII 213
>AL117205-8|CAB55167.1| 444|Caenorhabditis elegans Hypothetical
protein Y116A8A.9 protein.
Length = 444
Score = 60.5 bits (140), Expect = 9e-10
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 4/200 (2%)
Frame = +2
Query: 17 ADEKEVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNK 196
++E++ I+ + V Y+ + + +V + V + P + EICE LE T++
Sbjct: 115 SNEEKKALDISYEEVWQDYRRSAEAHRQVRKYVKSWIKPGMTMIEICER-----LETTSR 169
Query: 197 VFKKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVA 376
KE+ + G+AF T S+N+C H++P A + +L+ GD+ KID G H+ G + A
Sbjct: 170 RLIKEQGLEAGLAFPTGCSLNHCAAHYTPNAGDTT-VLQYGDVCKIDYGIHVRGRLIDSA 228
Query: 377 HTVVVGES----EVSGRAADVXXXXXXXXXXXXXXXKPGTENYAVTEAIQKISAEYGCKP 544
TV + R A E + ++ Y KP
Sbjct: 229 FTVHFDPKFDPLVEAVREATNAGIKESGIDVRLCDVGEIVEEVMTSHEVELDGKSYVVKP 288
Query: 545 IEGMLSHQLKQFRIDGEKSI 604
I + H + Q+RI K++
Sbjct: 289 IRNLNGHSIAQYRIHAGKTV 308
>AC024757-4|AAK68429.2| 371|Caenorhabditis elegans Methionine
aminopeptidase protein 1 protein.
Length = 371
Score = 40.7 bits (91), Expect = 8e-04
Identities = 29/109 (26%), Positives = 45/109 (41%)
Frame = +2
Query: 239 STCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGESEVSGRA 418
S C SVN ICH P + L+ GDL +D+ + GF + T +VG+ +V +
Sbjct: 173 SCCTSVNEVICHGIPDMRK----LENGDLCNVDVTVYHRGFHGDLNETFLVGD-KVDEES 227
Query: 419 ADVXXXXXXXXXXXXXXXKPGTENYAVTEAIQKISAEYGCKPIEGMLSH 565
+ KPG + + IQK + G ++G H
Sbjct: 228 RKLVKVTFECLQQAIAIVKPGVKFREIGNVIQKHANANGFSVVKGYCGH 276
>U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein.
Length = 415
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -2
Query: 213 FSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPAN 76
F L T+ N +LSP S LA AS + + TC T+ P N
Sbjct: 372 FGLLSTIWSGGNMNLSPGS---LASASASPTSSTCDHNDHTLVPIN 414
>AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess
protein 3, isoform a protein.
Length = 415
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -2
Query: 213 FSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPAN 76
F L T+ N +LSP S LA AS + + TC T+ P N
Sbjct: 372 FGLLSTIWSGGNMNLSPGS---LASASASPTSSTCDHNDHTLVPIN 414
>AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess
protein 3, isoform b protein.
Length = 443
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -2
Query: 213 FSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPAN 76
F L T+ N +LSP S LA AS + + TC T+ P N
Sbjct: 400 FGLLSTIWSGGNMNLSPGS---LASASASPTSSTCDHNDHTLVPIN 442
>Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical
protein ZK1320.12b protein.
Length = 497
Score = 29.9 bits (64), Expect = 1.5
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Frame = +2
Query: 11 EMADEKEVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEET 190
++ + K V K++ + +++K++L Q VL C+ A I +FG+++ L ET
Sbjct: 281 DIDEVKNVSKSLYDKGLISKHEL--QSGTEVL------CMSSDGAL-IDQFGERVYLSET 331
Query: 191 NKVFKKEKD--SKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLG 343
+ ++KD SK +TC + + PI D +++ D +DLG
Sbjct: 332 TSIDLEDKDRVSKSSTRMTTCGDGAESLRYHWPIDEMLDELIEL-DSCTMDLG 383
>Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical
protein ZK1320.12a protein.
Length = 495
Score = 29.9 bits (64), Expect = 1.5
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Frame = +2
Query: 11 EMADEKEVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEET 190
++ + K V K++ + +++K++L Q VL C+ A I +FG+++ L ET
Sbjct: 281 DIDEVKNVSKSLYDKGLISKHEL--QSGTEVL------CMSSDGAL-IDQFGERVYLSET 331
Query: 191 NKVFKKEKD--SKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLG 343
+ ++KD SK +TC + + PI D +++ D +DLG
Sbjct: 332 TSIDLEDKDRVSKSSTRMTTCGDGAESLRYHWPIDEMLDELIEL-DSCTMDLG 383
>Z75955-9|CAB00123.1| 406|Caenorhabditis elegans Hypothetical
protein R07B7.14 protein.
Length = 406
Score = 29.1 bits (62), Expect = 2.6
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 155 CEFGDKLVLEETNKVFKKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKI 334
C+FGDK + E +K+ K FS C + +P+A + + I KKG++ K+
Sbjct: 72 CKFGDKCL--EDHKIPKPGTRLCGSCRFSKCEQMG-----MNPMAIKSEIISKKGNILKM 124
Query: 335 DL-GAHIDGFIAVVAHTVVVGE 397
+L H IAV + E
Sbjct: 125 ELVKKHNRQLIAVTKEIAIDDE 146
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -1
Query: 478 RLQETKSRFTSMMSCQQNICSTSRDFTFTHNYCMSYNSYKSINVSTK 338
RL + S +T+ +C Q C T + T+T C+ N + +TK
Sbjct: 709 RLLSSWSEWTTTGTCNQTACGTCQTLTYTRT-CLKTNGCFCMGSATK 754
>Z82264-3|CAB05166.1| 277|Caenorhabditis elegans Hypothetical
protein C49C3.7 protein.
Length = 277
Score = 27.5 bits (58), Expect = 7.9
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +2
Query: 23 EKEVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVF 202
EKE+ K D++ K L+ +I N + ++ + VP+ S R+I E + L +E + +
Sbjct: 173 EKEMWKDRFNDVLSEKLALSARIRNVIGDRSESVEVPNDSNRDIWELREDLEMERSAR-R 231
Query: 203 KKEKDSK 223
K E++ K
Sbjct: 232 KAEEELK 238
>Z74033-7|CAA98472.2| 325|Caenorhabditis elegans Hypothetical
protein F38B7.4 protein.
Length = 325
Score = 27.5 bits (58), Expect = 7.9
Identities = 20/91 (21%), Positives = 38/91 (41%)
Frame = -1
Query: 322 ISFFQNVIRFARNGRKVTNAVVHRNAC*KCNAFLGVFLLFENLVSLLQYKFIAKFTYFSC 143
++ F + +F +N K R K N +L + + ++ + L+ F F F
Sbjct: 207 VATFAKIFKFYKNQNKTDKESRKRI---KKNIYLFIQTVLQDSLYLIDISFTFYFNSFYD 263
Query: 142 *CVWNAFCDDLLKDSVHYLSC*LVLGHNQIL 50
W FC + S+H L +++ N+ L
Sbjct: 264 YRFWTFFCGTFVWQSLHSLDGFIMIMFNERL 294
>Z50044-6|CAA90358.1| 223|Caenorhabditis elegans Hypothetical
protein F22B5.6 protein.
Length = 223
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 192 LVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPANLYLV 64
++S N S I +A+ THF +TC T F +L +V
Sbjct: 57 IISWNMLNSSRGKIVNENATNTHFGLTCVTTAFLCILTSLIIV 99
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 374 AHTVVVGESEVSGRAAD 424
AH + +GESE++G AAD
Sbjct: 350 AHPIHIGESEIAGHAAD 366
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,292,130
Number of Sequences: 27780
Number of extensions: 273272
Number of successful extensions: 987
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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