Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8a17
         (589 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    29   0.11 
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    26   1.0  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    25   1.4  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   3.2  
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    23   7.3  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 29.1 bits (62), Expect = 0.11
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -2

Query: 90  ITVVVVFLCDGWHIHPFTGSHSTFYLATKS 1
           ++  +VFL   WH  PF+ S+  ++L T +
Sbjct: 617 VSYAIVFLEPSWHCGPFSNSNRIYHLLTNA 646


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = -2

Query: 270 TTAWTHIGLYLFTFKSYT*TFPSAVQAANTVLEYGAHFTSPTAAPSSNINNGSLEADA 97
           TTA T       T  + T T P+ V  ++ +LE  A  T+P +A ++N    SL+A +
Sbjct: 149 TTATTTTTTTTTTTTTTTTTTPNPVGESDQILEIQAS-TTPVSATTANSLGTSLDAQS 205


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 286 EVDKNRFQHAFACDRMWRHKRNMSR 360
           E +KNR +HA   D++W  +R + +
Sbjct: 299 ESEKNREEHAQVLDKIWLKEREIEQ 323


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 236 NKYRPICVQAVVSKKTKKLTRIDFNTRL 319
           + YRPIC+ +V+ K  ++L +    T L
Sbjct: 488 SSYRPICLLSVLGKILERLIQRRLTTHL 515


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 125 MFELGAAVGDVKWAPYSSTVFAACTAD-GKVYVYDLNVNKYR 247
           M  L +AVG   WAP  + +  A + +  +V  YD N   YR
Sbjct: 1   MVRLNSAVGSRWWAPAMAILAVALSVEAAEVARYD-NYRLYR 41


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,037
Number of Sequences: 2352
Number of extensions: 13513
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)