Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8a17
(589 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC030583-1|AAH30583.1| 699|Homo sapiens dynein, axonemal, inter... 134 3e-31
AL160270-13|CAI13155.1| 699|Homo sapiens dynein, axonemal, inte... 134 3e-31
AF190496-1|AAF19816.1| 699|Homo sapiens dynein intermediate cha... 134 3e-31
AF091619-1|AAF18570.1| 699|Homo sapiens dynein intermediate cha... 134 3e-31
AL160270-14|CAI13157.1| 141|Homo sapiens dynein, axonemal, inte... 58 2e-08
BC011874-1|AAH11874.2| 536|Homo sapiens WD repeat domain 34 pro... 43 0.001
BC001614-1|AAH01614.2| 419|Homo sapiens WDR34 protein protein. 43 0.001
AL356481-6|CAH71407.1| 536|Homo sapiens WD repeat domain 34 pro... 43 0.001
EF011614-1|ABK41104.1| 446|Homo sapiens CDW4/GRWD1 protein. 42 0.001
BC126381-1|AAI26382.1| 848|Homo sapiens WD repeat domain 78 pro... 42 0.001
BC126379-1|AAI26380.1| 848|Homo sapiens WD repeat domain 78 pro... 42 0.001
BC002440-1|AAH02440.1| 446|Homo sapiens glutamate-rich WD repea... 42 0.001
AL592161-2|CAH72705.1| 848|Homo sapiens WD repeat domain 78 pro... 42 0.001
AL354978-2|CAH71842.1| 848|Homo sapiens WD repeat domain 78 pro... 42 0.001
AL139216-3|CAI18872.1| 848|Homo sapiens WD repeat domain 78 pro... 42 0.001
AK074676-1|BAC11130.1| 446|Homo sapiens protein ( Homo sapiens ... 42 0.001
AF337808-1|AAK17998.1| 446|Homo sapiens glutamate rich WD repea... 42 0.001
AB075822-1|BAB85528.1| 445|Homo sapiens KIAA1942 protein protein. 41 0.004
BC033013-1|AAH33013.1| 402|Homo sapiens DNAI2 protein protein. 36 0.080
AL137526-1|CAB70790.1| 289|Homo sapiens hypothetical protein pr... 36 0.080
AJ295276-1|CAC17464.1| 605|Homo sapiens intermediate dynein cha... 36 0.080
AF253097-1|AAG38000.1| 605|Homo sapiens dynein axonemal interme... 36 0.080
AF250288-1|AAG38489.1| 605|Homo sapiens dynein axonemal interme... 36 0.080
AK095246-1|BAC04508.1| 515|Homo sapiens protein ( Homo sapiens ... 33 0.75
AB081750-1|BAC67702.1| 515|Homo sapiens CDC20-like protein form... 33 0.75
AB077043-1|BAC67701.1| 519|Homo sapiens G6VTS76519 protein. 33 0.75
AF534401-1|AAO25963.1| 1129|Homo sapiens HPS5 protein major form... 33 0.99
AB023234-1|BAA76861.2| 1095|Homo sapiens KIAA1017 protein protein. 33 0.99
U63420-1|AAC50817.1| 753|Homo sapiens Sp140 protein protein. 32 1.7
U36500-1|AAB18617.1| 882|Homo sapiens LYSP100-B protein. 32 1.7
BC105960-1|AAI05961.1| 840|Homo sapiens SP140 protein protein. 32 1.7
BC105744-1|AAI05745.1| 807|Homo sapiens SP140 protein protein. 32 1.7
BC105743-1|AAI05744.1| 807|Homo sapiens SP140 protein protein. 32 1.7
BC022967-1|AAH22967.1| 326|Homo sapiens WDR22 protein protein. 32 1.7
AC009949-1|AAX88868.1| 453|Homo sapiens unknown protein. 32 1.7
AB058727-1|BAB47453.1| 958|Homo sapiens KIAA1824 protein protein. 32 1.7
D14689-1|BAA03515.1| 2093|Homo sapiens KIAA0023 protein. 31 2.3
BC105998-1|AAI05999.1| 2080|Homo sapiens NUP214 protein protein. 31 2.3
BC045620-1|AAH45620.2| 2090|Homo sapiens nucleoporin 214kDa prot... 31 2.3
AL157938-9|CAI41111.1| 2090|Homo sapiens nucleoporin 214kDa prot... 31 2.3
AB159230-1|BAD07398.1| 2091|Homo sapiens KIAA0023 splice variant... 31 2.3
U79303-1|AAB50227.1| 153|Homo sapiens unknown protein. 30 7.0
CR450308-1|CAG29304.1| 153|Homo sapiens ZNF581 protein. 30 7.0
BC025276-1|AAH25276.2| 556|Homo sapiens UTP18, small subunit (S... 30 7.0
BC008956-1|AAH08956.1| 280|Homo sapiens CCDC106 protein protein. 30 7.0
BC000412-1|AAH00412.1| 280|Homo sapiens CCDC106 protein protein. 30 7.0
AY007138-1|AAG01999.1| 393|Homo sapiens protein ( Homo sapiens ... 30 7.0
AF151806-1|AAD34043.1| 521|Homo sapiens CGI-48 protein protein. 30 7.0
BC026335-1|AAH26335.1| 475|Homo sapiens coronin, actin binding ... 29 9.2
AB023142-1|BAA76769.1| 479|Homo sapiens KIAA0925 protein protein. 29 9.2
AB010098-1|BAA36341.1| 475|Homo sapiens ClipinC protein. 29 9.2
>BC030583-1|AAH30583.1| 699|Homo sapiens dynein, axonemal,
intermediate chain 1 protein.
Length = 699
Score = 134 bits (323), Expect = 3e-31
Identities = 69/129 (53%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Frame = +2
Query: 110 KEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKK 289
K P+F+++L +AVGDV WAPYSSTVFAA T DGK +++DL +NKY IC Q V +KK +
Sbjct: 573 KTPMFIYDLNSAVGDVAWAPYSSTVFAAVTTDGKAHIFDLAINKYEAICNQPVAAKK-NR 631
Query: 290 LTRIDFNTRLPVIVCGDTKGTCHVLKLSPNLRVMCKPPKKAQGVDQ-RTLQIMKLDKLLS 466
LT + FN P+I+ GD +G LKLSPNLR M K KK Q V + ++I KLDKLL+
Sbjct: 632 LTHVQFNLIHPIIIVGDDRGHIISLKLSPNLRKMPK-EKKGQEVQKGPAVEIAKLDKLLN 690
Query: 467 LVRDPPYQT 493
LVR+ +T
Sbjct: 691 LVREVKIKT 699
Score = 30.7 bits (66), Expect = 4.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 143 AVGDVKWAPYSSTVFAACTADGKVYVYD 226
+V V W PY + VF +C++D V ++D
Sbjct: 542 SVDTVSWNPYHTKVFMSCSSDWTVKIWD 569
>AL160270-13|CAI13155.1| 699|Homo sapiens dynein, axonemal,
intermediate chain 1 protein.
Length = 699
Score = 134 bits (323), Expect = 3e-31
Identities = 69/129 (53%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Frame = +2
Query: 110 KEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKK 289
K P+F+++L +AVGDV WAPYSSTVFAA T DGK +++DL +NKY IC Q V +KK +
Sbjct: 573 KTPMFIYDLNSAVGDVAWAPYSSTVFAAVTTDGKAHIFDLAINKYEAICNQPVAAKK-NR 631
Query: 290 LTRIDFNTRLPVIVCGDTKGTCHVLKLSPNLRVMCKPPKKAQGVDQ-RTLQIMKLDKLLS 466
LT + FN P+I+ GD +G LKLSPNLR M K KK Q V + ++I KLDKLL+
Sbjct: 632 LTHVQFNLIHPIIIVGDDRGHIISLKLSPNLRKMPK-EKKGQEVQKGPAVEIAKLDKLLN 690
Query: 467 LVRDPPYQT 493
LVR+ +T
Sbjct: 691 LVREVKIKT 699
Score = 30.7 bits (66), Expect = 4.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 143 AVGDVKWAPYSSTVFAACTADGKVYVYD 226
+V V W PY + VF +C++D V ++D
Sbjct: 542 SVDTVSWNPYHTKVFMSCSSDWTVKIWD 569
>AF190496-1|AAF19816.1| 699|Homo sapiens dynein intermediate chain
DNAI1 protein.
Length = 699
Score = 134 bits (323), Expect = 3e-31
Identities = 69/129 (53%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Frame = +2
Query: 110 KEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKK 289
K P+F+++L +AVGDV WAPYSSTVFAA T DGK +++DL +NKY IC Q V +KK +
Sbjct: 573 KTPMFIYDLNSAVGDVAWAPYSSTVFAAVTTDGKAHIFDLAINKYEAICNQPVAAKK-NR 631
Query: 290 LTRIDFNTRLPVIVCGDTKGTCHVLKLSPNLRVMCKPPKKAQGVDQ-RTLQIMKLDKLLS 466
LT + FN P+I+ GD +G LKLSPNLR M K KK Q V + ++I KLDKLL+
Sbjct: 632 LTHVQFNLIHPIIIVGDDRGHIISLKLSPNLRKMPK-EKKGQEVQKGPAVEIAKLDKLLN 690
Query: 467 LVRDPPYQT 493
LVR+ +T
Sbjct: 691 LVREVKIKT 699
Score = 30.7 bits (66), Expect = 4.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 143 AVGDVKWAPYSSTVFAACTADGKVYVYD 226
+V V W PY + VF +C++D V ++D
Sbjct: 542 SVDTVSWNPYHTKVFMSCSSDWTVKIWD 569
>AF091619-1|AAF18570.1| 699|Homo sapiens dynein intermediate chain
DNAI1 protein.
Length = 699
Score = 134 bits (323), Expect = 3e-31
Identities = 69/129 (53%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Frame = +2
Query: 110 KEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKK 289
K P+F+++L +AVGDV WAPYSSTVFAA T DGK +++DL +NKY IC Q V +KK +
Sbjct: 573 KTPMFIYDLNSAVGDVAWAPYSSTVFAAVTTDGKAHIFDLAINKYEAICNQPVAAKK-NR 631
Query: 290 LTRIDFNTRLPVIVCGDTKGTCHVLKLSPNLRVMCKPPKKAQGVDQ-RTLQIMKLDKLLS 466
LT + FN P+I+ GD +G LKLSPNLR M K KK Q V + ++I KLDKLL+
Sbjct: 632 LTHVQFNLIHPIIIVGDDRGHIISLKLSPNLRKMPK-EKKGQEVQKGPAVEIAKLDKLLN 690
Query: 467 LVRDPPYQT 493
LVR+ +T
Sbjct: 691 LVREVKIKT 699
Score = 30.7 bits (66), Expect = 4.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 143 AVGDVKWAPYSSTVFAACTADGKVYVYD 226
+V V W PY + VF +C++D V ++D
Sbjct: 542 SVDTVSWNPYHTKVFMSCSSDWTVKIWD 569
>AL160270-14|CAI13157.1| 141|Homo sapiens dynein, axonemal,
intermediate chain 1 protein.
Length = 141
Score = 58.0 bits (134), Expect = 2e-08
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = +2
Query: 110 KEPLFMFELGAAVGDVKWAPYSSTVFAACTADGK 211
K P+F+++L +AVGDV WAPYSSTVFAA T DGK
Sbjct: 76 KTPMFIYDLNSAVGDVAWAPYSSTVFAAVTTDGK 109
Score = 30.7 bits (66), Expect = 4.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 143 AVGDVKWAPYSSTVFAACTADGKVYVYD 226
+V V W PY + VF +C++D V ++D
Sbjct: 45 SVDTVSWNPYHTKVFMSCSSDWTVKIWD 72
>BC011874-1|AAH11874.2| 536|Homo sapiens WD repeat domain 34
protein.
Length = 536
Score = 42.7 bits (96), Expect = 0.001
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Frame = +2
Query: 35 PVKGCMCHPSQRN------TTTTVIMPASASKEPLFMFELGAA-VGDVKWAPYSSTVFAA 193
P+ C P RN T V + + PL +L + V+W+P VFAA
Sbjct: 394 PIYSVSCSPFHRNLFLSAGTDGHVHLYSMLQAPPLTSLQLSLKYLFAVRWSPVRPLVFAA 453
Query: 194 CTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFNT-RLPVIVCGDTKGTCHVLKL 370
+ G V ++DL + +P V ++ + ++FN+ + ++ GD +GT V +L
Sbjct: 454 ASGKGDVQLFDLQKSSQKP-TVLIKQTQDESPVYCLEFNSQQTQLLAAGDAQGTVKVWQL 512
Query: 371 SPNLRVMCKPPKKAQGVD 424
S + P++A+ +D
Sbjct: 513 STEFTE--QGPREAEDLD 528
>BC001614-1|AAH01614.2| 419|Homo sapiens WDR34 protein protein.
Length = 419
Score = 42.7 bits (96), Expect = 0.001
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Frame = +2
Query: 35 PVKGCMCHPSQRN------TTTTVIMPASASKEPLFMFELGAA-VGDVKWAPYSSTVFAA 193
P+ C P RN T V + + PL +L + V+W+P VFAA
Sbjct: 277 PIYSVSCSPFHRNLFLSAGTDGHVHLYSMLQAPPLTSLQLSLKYLFAVRWSPVRPLVFAA 336
Query: 194 CTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFNT-RLPVIVCGDTKGTCHVLKL 370
+ G V ++DL + +P V ++ + ++FN+ + ++ GD +GT V +L
Sbjct: 337 ASGKGDVQLFDLQKSSQKP-TVLIKQTQDESPVYCLEFNSQQTQLLAAGDAQGTVKVWQL 395
Query: 371 SPNLRVMCKPPKKAQGVD 424
S + P++A+ +D
Sbjct: 396 STEFTE--QGPREAEDLD 411
>AL356481-6|CAH71407.1| 536|Homo sapiens WD repeat domain 34
protein.
Length = 536
Score = 42.7 bits (96), Expect = 0.001
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Frame = +2
Query: 35 PVKGCMCHPSQRN------TTTTVIMPASASKEPLFMFELGAA-VGDVKWAPYSSTVFAA 193
P+ C P RN T V + + PL +L + V+W+P VFAA
Sbjct: 394 PIYSVSCSPFHRNLFLSAGTDGHVHLYSMLQAPPLTSLQLSLKYLFAVRWSPVRPLVFAA 453
Query: 194 CTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFNT-RLPVIVCGDTKGTCHVLKL 370
+ G V ++DL + +P V ++ + ++FN+ + ++ GD +GT V +L
Sbjct: 454 ASGKGDVQLFDLQKSSQKP-TVLIKQTQDESPVYCLEFNSQQTQLLAAGDAQGTVKVWQL 512
Query: 371 SPNLRVMCKPPKKAQGVD 424
S + P++A+ +D
Sbjct: 513 STEFTE--QGPREAEDLD 528
>EF011614-1|ABK41104.1| 446|Homo sapiens CDW4/GRWD1 protein.
Length = 446
Score = 42.3 bits (95), Expect = 0.001
Identities = 19/76 (25%), Positives = 39/76 (51%)
Frame = +2
Query: 143 AVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFNTRLP 322
+V D++W+P +TVFA+C+AD + ++D+ + C+ + + I ++ R P
Sbjct: 263 SVEDLQWSPTENTVFASCSADASIRIWDIRAAPSK-ACMLTTATAHDGDVNVISWSRREP 321
Query: 323 VIVCGDTKGTCHVLKL 370
++ G G + L
Sbjct: 322 FLLSGGDDGALKIWDL 337
Score = 30.7 bits (66), Expect = 4.0
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 140 AAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNK 241
A V V+W P S VFAA AD ++ +DL V +
Sbjct: 354 APVTSVEWHPQDSGVFAASGADHQITQWDLAVER 387
>BC126381-1|AAI26382.1| 848|Homo sapiens WD repeat domain 78
protein.
Length = 848
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/87 (29%), Positives = 44/87 (50%)
Frame = +2
Query: 110 KEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKK 289
K L + + V DV W+P SS +FAA + +V ++DL+++ P+ V + K
Sbjct: 738 KPSLSFYPATSVVYDVAWSPKSSYIFAAAN-ENRVEIWDLHISTLDPLIVN--TANPGIK 794
Query: 290 LTRIDFNTRLPVIVCGDTKGTCHVLKL 370
T I F + ++ GD+ G V +L
Sbjct: 795 FTTILFAKQTDCLLVGDSDGQVSVYEL 821
>BC126379-1|AAI26380.1| 848|Homo sapiens WD repeat domain 78
protein.
Length = 848
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/87 (29%), Positives = 44/87 (50%)
Frame = +2
Query: 110 KEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKK 289
K L + + V DV W+P SS +FAA + +V ++DL+++ P+ V + K
Sbjct: 738 KPSLSFYPATSVVYDVAWSPKSSYIFAAAN-ENRVEIWDLHISTLDPLIVN--TANPGIK 794
Query: 290 LTRIDFNTRLPVIVCGDTKGTCHVLKL 370
T I F + ++ GD+ G V +L
Sbjct: 795 FTTILFAKQTDCLLVGDSDGQVSVYEL 821
>BC002440-1|AAH02440.1| 446|Homo sapiens glutamate-rich WD repeat
containing 1 protein.
Length = 446
Score = 42.3 bits (95), Expect = 0.001
Identities = 19/76 (25%), Positives = 39/76 (51%)
Frame = +2
Query: 143 AVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFNTRLP 322
+V D++W+P +TVFA+C+AD + ++D+ + C+ + + I ++ R P
Sbjct: 263 SVEDLQWSPTENTVFASCSADASIRIWDIRAAPSK-ACMLTTATAHDGDVNVISWSRREP 321
Query: 323 VIVCGDTKGTCHVLKL 370
++ G G + L
Sbjct: 322 FLLSGGDDGALKIWDL 337
Score = 30.7 bits (66), Expect = 4.0
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 140 AAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNK 241
A V V+W P S VFAA AD ++ +DL V +
Sbjct: 354 APVTSVEWHPQDSGVFAASGADHQITQWDLAVER 387
>AL592161-2|CAH72705.1| 848|Homo sapiens WD repeat domain 78
protein.
Length = 848
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/87 (29%), Positives = 44/87 (50%)
Frame = +2
Query: 110 KEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKK 289
K L + + V DV W+P SS +FAA + +V ++DL+++ P+ V + K
Sbjct: 738 KPSLSFYPATSVVYDVAWSPKSSYIFAAAN-ENRVEIWDLHISTLDPLIVN--TANPGIK 794
Query: 290 LTRIDFNTRLPVIVCGDTKGTCHVLKL 370
T I F + ++ GD+ G V +L
Sbjct: 795 FTTILFAKQTDCLLVGDSDGQVSVYEL 821
>AL354978-2|CAH71842.1| 848|Homo sapiens WD repeat domain 78
protein.
Length = 848
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/87 (29%), Positives = 44/87 (50%)
Frame = +2
Query: 110 KEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKK 289
K L + + V DV W+P SS +FAA + +V ++DL+++ P+ V + K
Sbjct: 738 KPSLSFYPATSVVYDVAWSPKSSYIFAAAN-ENRVEIWDLHISTLDPLIVN--TANPGIK 794
Query: 290 LTRIDFNTRLPVIVCGDTKGTCHVLKL 370
T I F + ++ GD+ G V +L
Sbjct: 795 FTTILFAKQTDCLLVGDSDGQVSVYEL 821
>AL139216-3|CAI18872.1| 848|Homo sapiens WD repeat domain 78
protein.
Length = 848
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/87 (29%), Positives = 44/87 (50%)
Frame = +2
Query: 110 KEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKK 289
K L + + V DV W+P SS +FAA + +V ++DL+++ P+ V + K
Sbjct: 738 KPSLSFYPATSVVYDVAWSPKSSYIFAAAN-ENRVEIWDLHISTLDPLIVN--TANPGIK 794
Query: 290 LTRIDFNTRLPVIVCGDTKGTCHVLKL 370
T I F + ++ GD+ G V +L
Sbjct: 795 FTTILFAKQTDCLLVGDSDGQVSVYEL 821
>AK074676-1|BAC11130.1| 446|Homo sapiens protein ( Homo sapiens
cDNA FLJ90195 fis, clone MAMMA1001310. ).
Length = 446
Score = 42.3 bits (95), Expect = 0.001
Identities = 19/76 (25%), Positives = 39/76 (51%)
Frame = +2
Query: 143 AVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFNTRLP 322
+V D++W+P +TVFA+C+AD + ++D+ + C+ + + I ++ R P
Sbjct: 263 SVEDLQWSPTENTVFASCSADASIRIWDIRAAPSK-ACMLTTATAHDGDVNVISWSRREP 321
Query: 323 VIVCGDTKGTCHVLKL 370
++ G G + L
Sbjct: 322 FLLSGGDDGALKIWDL 337
Score = 30.7 bits (66), Expect = 4.0
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 140 AAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNK 241
A V V+W P S VFAA AD ++ +DL V +
Sbjct: 354 APVTSVEWHPQDSGVFAASGADHQITQWDLAVER 387
>AF337808-1|AAK17998.1| 446|Homo sapiens glutamate rich WD repeat
protein protein.
Length = 446
Score = 42.3 bits (95), Expect = 0.001
Identities = 19/76 (25%), Positives = 39/76 (51%)
Frame = +2
Query: 143 AVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFNTRLP 322
+V D++W+P +TVFA+C+AD + ++D+ + C+ + + I ++ R P
Sbjct: 263 SVEDLQWSPTENTVFASCSADASIRIWDIRAAPSK-ACMLTTATAHDGDVNVISWSRREP 321
Query: 323 VIVCGDTKGTCHVLKL 370
++ G G + L
Sbjct: 322 FLLSGGDDGALKIWDL 337
Score = 30.7 bits (66), Expect = 4.0
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 140 AAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNK 241
A V V+W P S VFAA AD ++ +DL V +
Sbjct: 354 APVTSVEWHPQDSGVFAASGADHQITQWDLAVER 387
>AB075822-1|BAB85528.1| 445|Homo sapiens KIAA1942 protein protein.
Length = 445
Score = 40.7 bits (91), Expect = 0.004
Identities = 18/76 (23%), Positives = 39/76 (51%)
Frame = +2
Query: 143 AVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFNTRLP 322
+V D++W+P +TVFA+C+AD + ++D+ + C+ + + I ++ + P
Sbjct: 262 SVEDLQWSPTENTVFASCSADASIRIWDIRAAPSK-ACMLTTATAHDGDVNVISWSRQEP 320
Query: 323 VIVCGDTKGTCHVLKL 370
++ G G + L
Sbjct: 321 FLLSGGDDGALKIWDL 336
Score = 30.7 bits (66), Expect = 4.0
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 140 AAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNK 241
A V V+W P S VFAA AD ++ +DL V +
Sbjct: 353 APVTSVEWHPQDSGVFAASGADHQITQWDLAVER 386
>BC033013-1|AAH33013.1| 402|Homo sapiens DNAI2 protein protein.
Length = 402
Score = 36.3 bits (80), Expect = 0.080
Identities = 25/89 (28%), Positives = 39/89 (43%)
Frame = +2
Query: 140 AAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFNTRL 319
A + D W+P TVF DG + ++D + P + V + R+ N L
Sbjct: 265 AYLTDAAWSPVRPTVFFTTRMDGTLDIWDFMFEQCDP-TLSLKVCDEALFCLRVQDNGCL 323
Query: 320 PVIVCGDTKGTCHVLKLSPNLRVMCKPPK 406
I CG GT +L++SP L + + K
Sbjct: 324 --IACGSQLGTTTLLEVSPGLSTLQRNEK 350
>AL137526-1|CAB70790.1| 289|Homo sapiens hypothetical protein
protein.
Length = 289
Score = 36.3 bits (80), Expect = 0.080
Identities = 25/89 (28%), Positives = 39/89 (43%)
Frame = +2
Query: 140 AAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFNTRL 319
A + D W+P TVF DG + ++D + P + V + R+ N L
Sbjct: 92 AYLTDAAWSPVRPTVFFTTRMDGTLDIWDFMFEQCDP-TLSLKVCDEALFCLRVQDNGCL 150
Query: 320 PVIVCGDTKGTCHVLKLSPNLRVMCKPPK 406
I CG GT +L++SP L + + K
Sbjct: 151 --IACGSQLGTTTLLEVSPGLSTLQRNEK 177
>AJ295276-1|CAC17464.1| 605|Homo sapiens intermediate dynein chain
protein.
Length = 605
Score = 36.3 bits (80), Expect = 0.080
Identities = 25/89 (28%), Positives = 39/89 (43%)
Frame = +2
Query: 140 AAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFNTRL 319
A + D W+P TVF DG + ++D + P + V + R+ N L
Sbjct: 408 AYLTDAAWSPVRPTVFFTTRMDGTLDIWDFMFEQCDP-TLSLKVCDEALFCLRVQDNGCL 466
Query: 320 PVIVCGDTKGTCHVLKLSPNLRVMCKPPK 406
I CG GT +L++SP L + + K
Sbjct: 467 --IACGSQLGTTTLLEVSPGLSTLQRNEK 493
>AF253097-1|AAG38000.1| 605|Homo sapiens dynein axonemal
intermediate chain protein.
Length = 605
Score = 36.3 bits (80), Expect = 0.080
Identities = 25/89 (28%), Positives = 39/89 (43%)
Frame = +2
Query: 140 AAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFNTRL 319
A + D W+P TVF DG + ++D + P + V + R+ N L
Sbjct: 408 AYLTDAAWSPVRPTVFFTTRMDGTLDIWDFMFEQCDP-TLSLKVCDEALFCLRVQDNGCL 466
Query: 320 PVIVCGDTKGTCHVLKLSPNLRVMCKPPK 406
I CG GT +L++SP L + + K
Sbjct: 467 --IACGSQLGTTTLLEVSPGLSTLQRNEK 493
>AF250288-1|AAG38489.1| 605|Homo sapiens dynein axonemal
intermediate chain protein.
Length = 605
Score = 36.3 bits (80), Expect = 0.080
Identities = 25/89 (28%), Positives = 39/89 (43%)
Frame = +2
Query: 140 AAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFNTRL 319
A + D W+P TVF DG + ++D + P + V + R+ N L
Sbjct: 408 AYLTDAAWSPVRPTVFFTTRMDGTLDIWDFMFEQCDP-TLSLKVCDEALFCLRVQDNGCL 466
Query: 320 PVIVCGDTKGTCHVLKLSPNLRVMCKPPK 406
I CG GT +L++SP L + + K
Sbjct: 467 --IACGSQLGTTTLLEVSPGLSTLQRNEK 493
>AK095246-1|BAC04508.1| 515|Homo sapiens protein ( Homo sapiens
cDNA FLJ37927 fis, clone CTONG2001428, weakly similar to
Xenopus laevis fizzy1 mRNA. ).
Length = 515
Score = 33.1 bits (72), Expect = 0.75
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 98 ASASKEPLFMFELGAAVGDVKWAPYSSTVFA--ACTADGKVYVYDLNVNK 241
ASA +PL + AV + W P+ S V A DG++++ D+N K
Sbjct: 388 ASAQGQPLKVITQSTAVKAMDWCPWQSGVLAIGGGMKDGRLHILDINAGK 437
>AB081750-1|BAC67702.1| 515|Homo sapiens CDC20-like protein form 2
protein.
Length = 515
Score = 33.1 bits (72), Expect = 0.75
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 98 ASASKEPLFMFELGAAVGDVKWAPYSSTVFA--ACTADGKVYVYDLNVNK 241
ASA +PL + AV + W P+ S V A DG++++ D+N K
Sbjct: 388 ASAQGQPLKVITQSTAVKAMDWCPWQSGVLAIGGGMKDGRLHILDINAGK 437
>AB077043-1|BAC67701.1| 519|Homo sapiens G6VTS76519 protein.
Length = 519
Score = 33.1 bits (72), Expect = 0.75
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 98 ASASKEPLFMFELGAAVGDVKWAPYSSTVFA--ACTADGKVYVYDLNVNK 241
ASA +PL + AV + W P+ S V A DG++++ D+N K
Sbjct: 388 ASAQGQPLKVITQSTAVKAMDWCPWQSGVLAIGGGMKDGRLHILDINAGK 437
>AF534401-1|AAO25963.1| 1129|Homo sapiens HPS5 protein major form
protein.
Length = 1129
Score = 32.7 bits (71), Expect = 0.99
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +2
Query: 110 KEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKY-RPICVQAVVSKKTK 286
K LF+ A+ V + A T+ G V V++LN + +P + K +
Sbjct: 65 KHRLFLSHREGAISQVACCLHDDDYVAVATSQGLVVVWELNQERRGKPEQMYVSSEHKGR 124
Query: 287 KLTRIDFNTRLPVIVCGDTKGTCHVLKLS 373
++T + ++T + + GD G +KL+
Sbjct: 125 RVTALCWDTAILRVFVGDHAGKVSAIKLN 153
>AB023234-1|BAA76861.2| 1095|Homo sapiens KIAA1017 protein protein.
Length = 1095
Score = 32.7 bits (71), Expect = 0.99
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +2
Query: 110 KEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKY-RPICVQAVVSKKTK 286
K LF+ A+ V + A T+ G V V++LN + +P + K +
Sbjct: 31 KHRLFLSHREGAISQVACCLHDDDYVAVATSQGLVVVWELNQERRGKPEQMYVSSEHKGR 90
Query: 287 KLTRIDFNTRLPVIVCGDTKGTCHVLKLS 373
++T + ++T + + GD G +KL+
Sbjct: 91 RVTALCWDTAILRVFVGDHAGKVSAIKLN 119
>U63420-1|AAC50817.1| 753|Homo sapiens Sp140 protein protein.
Length = 753
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 257 VQAVVSKKTKKLTRIDFNTRLPVIVCGDTKGTCHVLKLSPNLRVMC 394
V++ S+K K T +DF L + CG KG H KL + V C
Sbjct: 456 VRSRASRKHKDET-VDFKAPLLPVTCGGVKGILHKKKLQQGILVKC 500
>U36500-1|AAB18617.1| 882|Homo sapiens LYSP100-B protein.
Length = 882
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 257 VQAVVSKKTKKLTRIDFNTRLPVIVCGDTKGTCHVLKLSPNLRVMC 394
V++ S+K K T +DF L + CG KG H KL + V C
Sbjct: 570 VRSRASRKHKDET-VDFKAPLLPVTCGGVKGILHKKKLQQGILVKC 614
>BC105960-1|AAI05961.1| 840|Homo sapiens SP140 protein protein.
Length = 840
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 257 VQAVVSKKTKKLTRIDFNTRLPVIVCGDTKGTCHVLKLSPNLRVMC 394
V++ S+K K T +DF L + CG KG H KL + V C
Sbjct: 543 VRSRASRKHKDET-VDFKAPLLPVTCGGVKGILHKKKLQQGILVKC 587
>BC105744-1|AAI05745.1| 807|Homo sapiens SP140 protein protein.
Length = 807
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 257 VQAVVSKKTKKLTRIDFNTRLPVIVCGDTKGTCHVLKLSPNLRVMC 394
V++ S+K K T +DF L + CG KG H KL + V C
Sbjct: 510 VRSRASRKHKDET-VDFKAPLLPVTCGGVKGILHKKKLQQGILVKC 554
>BC105743-1|AAI05744.1| 807|Homo sapiens SP140 protein protein.
Length = 807
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 257 VQAVVSKKTKKLTRIDFNTRLPVIVCGDTKGTCHVLKLSPNLRVMC 394
V++ S+K K T +DF L + CG KG H KL + V C
Sbjct: 510 VRSRASRKHKDET-VDFKAPLLPVTCGGVKGILHKKKLQQGILVKC 554
>BC022967-1|AAH22967.1| 326|Homo sapiens WDR22 protein protein.
Length = 326
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 86 VIMPASASKEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKY-RPICV 259
VI+ S E L +F AV + +P + +FA+ + DG+V ++D+ + + P C+
Sbjct: 125 VILHDVESSETLDVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEPFCL 183
>AC009949-1|AAX88868.1| 453|Homo sapiens unknown protein.
Length = 453
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 257 VQAVVSKKTKKLTRIDFNTRLPVIVCGDTKGTCHVLKLSPNLRVMC 394
V++ S+K K T +DF L + CG KG H KL + V C
Sbjct: 156 VRSRASRKHKDET-VDFKAPLLPVTCGGVKGILHKKKLQQGILVKC 200
>AB058727-1|BAB47453.1| 958|Homo sapiens KIAA1824 protein protein.
Length = 958
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 86 VIMPASASKEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKY-RPICV 259
VI+ S E L +F AV + +P + +FA+ + DG+V ++D+ + + P C+
Sbjct: 141 VILHDVESSETLDVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEPFCL 199
>D14689-1|BAA03515.1| 2093|Homo sapiens KIAA0023 protein.
Length = 2093
Score = 31.5 bits (68), Expect = 2.3
Identities = 23/85 (27%), Positives = 39/85 (45%)
Frame = +2
Query: 131 ELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFN 310
+ G V D+KW P ++ A C ADG + V L V + +C T +T + ++
Sbjct: 147 DAGGMVIDMKWNPTVPSMVAVCLADGSIAV--LQVTETVKVC---ATLPSTVAVTSVCWS 201
Query: 311 TRLPVIVCGDTKGTCHVLKLSPNLR 385
+ + G GT V++ P L+
Sbjct: 202 PKGKQLAVGKQNGT--VVQYLPTLQ 224
>BC105998-1|AAI05999.1| 2080|Homo sapiens NUP214 protein protein.
Length = 2080
Score = 31.5 bits (68), Expect = 2.3
Identities = 23/85 (27%), Positives = 39/85 (45%)
Frame = +2
Query: 131 ELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFN 310
+ G V D+KW P ++ A C ADG + V L V + +C T +T + ++
Sbjct: 147 DAGGMVIDMKWNPTVPSMVAVCLADGSIAV--LQVTETVKVC---ATLPSTVAVTSVCWS 201
Query: 311 TRLPVIVCGDTKGTCHVLKLSPNLR 385
+ + G GT V++ P L+
Sbjct: 202 PKGKQLAVGKQNGT--VVQYLPTLQ 224
>BC045620-1|AAH45620.2| 2090|Homo sapiens nucleoporin 214kDa
protein.
Length = 2090
Score = 31.5 bits (68), Expect = 2.3
Identities = 23/85 (27%), Positives = 39/85 (45%)
Frame = +2
Query: 131 ELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFN 310
+ G V D+KW P ++ A C ADG + V L V + +C T +T + ++
Sbjct: 147 DAGGMVIDMKWNPTVPSMVAVCLADGSIAV--LQVTETVKVC---ATLPSTVAVTSVCWS 201
Query: 311 TRLPVIVCGDTKGTCHVLKLSPNLR 385
+ + G GT V++ P L+
Sbjct: 202 PKGKQLAVGKQNGT--VVQYLPTLQ 224
>AL157938-9|CAI41111.1| 2090|Homo sapiens nucleoporin 214kDa
protein.
Length = 2090
Score = 31.5 bits (68), Expect = 2.3
Identities = 23/85 (27%), Positives = 39/85 (45%)
Frame = +2
Query: 131 ELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFN 310
+ G V D+KW P ++ A C ADG + V L V + +C T +T + ++
Sbjct: 147 DAGGMVIDMKWNPTVPSMVAVCLADGSIAV--LQVTETVKVC---ATLPSTVAVTSVCWS 201
Query: 311 TRLPVIVCGDTKGTCHVLKLSPNLR 385
+ + G GT V++ P L+
Sbjct: 202 PKGKQLAVGKQNGT--VVQYLPTLQ 224
>AB159230-1|BAD07398.1| 2091|Homo sapiens KIAA0023 splice variant 1
protein.
Length = 2091
Score = 31.5 bits (68), Expect = 2.3
Identities = 23/85 (27%), Positives = 39/85 (45%)
Frame = +2
Query: 131 ELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFN 310
+ G V D+KW P ++ A C ADG + V L V + +C T +T + ++
Sbjct: 148 DAGGMVIDMKWNPTVPSMVAVCLADGSIAV--LQVTETVKVC---ATLPSTVAVTSVCWS 202
Query: 311 TRLPVIVCGDTKGTCHVLKLSPNLR 385
+ + G GT V++ P L+
Sbjct: 203 PKGKQLAVGKQNGT--VVQYLPTLQ 225
>U79303-1|AAB50227.1| 153|Homo sapiens unknown protein.
Length = 153
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -3
Query: 557 INTIKTTRKCFSRRQTFRQQLPFDKADHEPN*VTYPIS*SVRSFGRLLELFSVACTLPSN 378
+N + R+ +TF +PFD+A H + Y +S S R+F E S A L ++
Sbjct: 1 MNDRSSRRRTMKDDETFEISIPFDEAPHLDPQIFYSLSPSRRNFEEPPEAASSALALMNS 60
Query: 377 L 375
+
Sbjct: 61 V 61
>CR450308-1|CAG29304.1| 153|Homo sapiens ZNF581 protein.
Length = 153
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -3
Query: 557 INTIKTTRKCFSRRQTFRQQLPFDKADHEPN*VTYPIS*SVRSFGRLLELFSVACTLPSN 378
+N + R+ +TF +PFD+A H + Y +S S R+F E S A L ++
Sbjct: 1 MNDRSSRRRTMKDDETFEISIPFDEAPHLDPQIFYSLSPSRRNFEEPPEAASSALALMNS 60
Query: 377 L 375
+
Sbjct: 61 V 61
>BC025276-1|AAH25276.2| 556|Homo sapiens UTP18, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 556
Score = 29.9 bits (64), Expect = 7.0
Identities = 25/105 (23%), Positives = 45/105 (42%)
Frame = +2
Query: 98 ASASKEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSK 277
A +KE + ++ V ++ S V+A+ + DG+VYV+D+N K C+ V +
Sbjct: 369 AMKTKELIGSMKINGRVAASTFSSDSKKVYAS-SGDGEVYVWDVNSRK----CLNRFVDE 423
Query: 278 KTKKLTRIDFNTRLPVIVCGDTKGTCHVLKLSPNLRVMCKPPKKA 412
+ I + + CG G ++ L+ P KA
Sbjct: 424 GSLYGLSIATSRNGQYVACGSNCGVVNIYNQDSCLQETNPKPIKA 468
>BC008956-1|AAH08956.1| 280|Homo sapiens CCDC106 protein protein.
Length = 280
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -3
Query: 557 INTIKTTRKCFSRRQTFRQQLPFDKADHEPN*VTYPIS*SVRSFGRLLELFSVACTLPSN 378
+N + R+ +TF +PFD+A H + Y +S S R+F E S A L ++
Sbjct: 1 MNDRSSRRRTMKDDETFEISIPFDEAPHLDPQIFYSLSPSRRNFEEPPEAASSALALMNS 60
Query: 377 L 375
+
Sbjct: 61 V 61
>BC000412-1|AAH00412.1| 280|Homo sapiens CCDC106 protein protein.
Length = 280
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -3
Query: 557 INTIKTTRKCFSRRQTFRQQLPFDKADHEPN*VTYPIS*SVRSFGRLLELFSVACTLPSN 378
+N + R+ +TF +PFD+A H + Y +S S R+F E S A L ++
Sbjct: 1 MNDRSSRRRTMKDDETFEISIPFDEAPHLDPQIFYSLSPSRRNFEEPPEAASSALALMNS 60
Query: 377 L 375
+
Sbjct: 61 V 61
>AY007138-1|AAG01999.1| 393|Homo sapiens protein ( Homo sapiens
clone CDABP0061 mRNA sequence. ).
Length = 393
Score = 29.9 bits (64), Expect = 7.0
Identities = 25/105 (23%), Positives = 45/105 (42%)
Frame = +2
Query: 98 ASASKEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSK 277
A +KE + ++ V ++ S V+A+ + DG+VYV+D+N K C+ V +
Sbjct: 206 AMKTKELIGSMKINGRVAASTFSSDSKKVYAS-SGDGEVYVWDVNSRK----CLNRFVDE 260
Query: 278 KTKKLTRIDFNTRLPVIVCGDTKGTCHVLKLSPNLRVMCKPPKKA 412
+ I + + CG G ++ L+ P KA
Sbjct: 261 GSLYGLSIATSRNGQYVACGSNCGVVNIYNQDSCLQETNPKPIKA 305
>AF151806-1|AAD34043.1| 521|Homo sapiens CGI-48 protein protein.
Length = 521
Score = 29.9 bits (64), Expect = 7.0
Identities = 25/105 (23%), Positives = 45/105 (42%)
Frame = +2
Query: 98 ASASKEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSK 277
A +KE + ++ V ++ S V+A+ + DG+VYV+D+N K C+ V +
Sbjct: 345 AMKTKELIGSMKINGRVAASTFSSDSKKVYAS-SGDGEVYVWDVNSRK----CLNRFVDE 399
Query: 278 KTKKLTRIDFNTRLPVIVCGDTKGTCHVLKLSPNLRVMCKPPKKA 412
+ I + + CG G ++ L+ P KA
Sbjct: 400 GSLYGLSIATSRNGQYVACGSNCGVVNIYNQDSCLQETNPKPIKA 444
>BC026335-1|AAH26335.1| 475|Homo sapiens coronin, actin binding
protein, 2B protein.
Length = 475
Score = 29.5 bits (63), Expect = 9.2
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +2
Query: 152 DVKWAPYSSTVFAACTADGKVYVYDL 229
D+KW P+ + A+C+ D V ++++
Sbjct: 87 DIKWNPFIDNIIASCSEDTSVRIWEI 112
>AB023142-1|BAA76769.1| 479|Homo sapiens KIAA0925 protein protein.
Length = 479
Score = 29.5 bits (63), Expect = 9.2
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +2
Query: 152 DVKWAPYSSTVFAACTADGKVYVYDL 229
D+KW P+ + A+C+ D V ++++
Sbjct: 91 DIKWNPFIDNIIASCSEDTSVRIWEI 116
>AB010098-1|BAA36341.1| 475|Homo sapiens ClipinC protein.
Length = 475
Score = 29.5 bits (63), Expect = 9.2
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +2
Query: 152 DVKWAPYSSTVFAACTADGKVYVYDL 229
D+KW P+ + A+C+ D V ++++
Sbjct: 87 DIKWNPFIDNIIASCSEDTSVRIWEI 112
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,726,250
Number of Sequences: 237096
Number of extensions: 1801464
Number of successful extensions: 3642
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 3492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3633
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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