Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8a12
         (506 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    22   2.7  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   4.8  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   4.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   4.8  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   6.3  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   8.4  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   8.4  

>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +2

Query: 293 CGSDIGKSRMWARRRVCCIGSSANAC 370
           C + +  S  W +R     GS AN C
Sbjct: 17  CTAQLNFSTDWGKRSGSSAGSDANNC 42


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 352 PNTAHTTASPHP*FPDV 302
           P++AHT   P P  P V
Sbjct: 57  PSSAHTVLIPQPLHPSV 73


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +3

Query: 402 IHMEALGAKCVRVPQVEGTYGNVTLNDVK 488
           +++  +G +C   P   G Y +  +ND K
Sbjct: 45  VNLPGVGHRCQCQPGFTGKYCHENINDCK 73


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 290 SCGSDIGKSRMWARRR 337
           SC  D+G   +W R+R
Sbjct: 709 SCDCDLGWVEVWERKR 724


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 410 GGSRGQMRKSSASGRHVRKRDFERCKSSG 496
           GG+ G++R+ S +    R   F+R  + G
Sbjct: 169 GGTTGKLRRRSTAASRSRLAAFKRTIALG 197


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 506 AYFLHCFYIVQSHVS 462
           +YF+  FY+V S VS
Sbjct: 28  SYFMVAFYVVFSSVS 42


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 506 AYFLHCFYIVQSHVS 462
           +YF+  FY+V S VS
Sbjct: 28  SYFMVAFYVVFSSVS 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,769
Number of Sequences: 336
Number of extensions: 3205
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)