Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8a12
(506 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0339 - 4429742-4429840,4429932-4430012,4430232-4430291,443... 90 1e-18
12_02_1181 - 26732439-26732528,26732883-26732963,26733104-267331... 81 4e-16
03_05_1124 + 30559633-30559674,30559781-30559890,30559973-305600... 77 6e-15
01_06_1119 - 34640611-34640721,34640995-34641075,34641437-346414... 68 4e-12
06_01_0358 + 2573241-2573324,2573509-2573636,2573769-2573971,257... 63 1e-10
01_07_0387 - 43224718-43224810,43224990-43225070,43225676-432257... 61 4e-10
03_02_0162 + 6053144-6053365,6053474-6053548,6054477-6054623,605... 60 8e-10
06_03_0487 - 21352955-21353080,21353164-21353357,21353815-213539... 57 9e-09
06_03_0486 - 21344680-21344805,21344922-21345115,21350027-213501... 54 7e-08
06_03_0491 - 21383036-21383161,21383246-21383439,21383627-213837... 54 9e-08
06_03_0488 - 21361131-21361226,21361922-21362124,21362252-213624... 40 9e-04
06_01_0359 + 2578179-2578291,2578950-2579152,2579319-2579444,257... 31 0.53
10_08_0725 + 20126821-20127528 30 1.2
02_04_0363 + 22369461-22370127,22370240-22370310,22370412-223709... 29 1.6
11_05_0059 - 18724619-18725053 28 3.7
04_04_0373 - 24785799-24786200,24787979-24788161,24790909-247911... 28 3.7
05_04_0304 - 20048518-20049003,20049074-20049412 28 5.0
02_05_0795 - 31792231-31794780 27 6.5
07_03_1000 - 23220878-23221821,23222164-23223001 27 8.7
>04_01_0339 -
4429742-4429840,4429932-4430012,4430232-4430291,
4430715-4430794,4430923-4430974,4431045-4431182,
4431449-4431712,4432031-4432088,4433261-4433370,
4433604-4433795
Length = 377
Score = 89.8 bits (213), Expect = 1e-18
Identities = 52/126 (41%), Positives = 73/126 (57%), Gaps = 2/126 (1%)
Frame = +3
Query: 99 EIKASALDLIGNTPIVALDRLHPGPG-RILAKCEFMNPGASIKCRSSLCMIKKALASGEL 275
+I+ SA LIG TP+V L+++ G G RI AK EF+ P S+K R ++ M++ A G +
Sbjct: 57 KIRDSASQLIGRTPMVYLNKVTEGCGARIAAKLEFLQPSFSVKDRPAISMLEDAEKKGLI 116
Query: 276 KP-KEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVE 452
P K ++E TSGN G GLA + A+ G+ L L M S +R + M A GAK V +
Sbjct: 117 TPGKTTLIEPTSGNMGIGLAFMAALKGYELILTMPSYTSLERRVTMRAFGAKLVLTDPTK 176
Query: 453 GTYGNV 470
G G V
Sbjct: 177 GMGGTV 182
>12_02_1181 -
26732439-26732528,26732883-26732963,26733104-26733163,
26733372-26733451,26733815-26733866,26733987-26734124,
26734203-26734466,26735895-26735952,26736153-26736262,
26736385-26736432,26736812-26736823
Length = 330
Score = 81.4 bits (192), Expect = 4e-16
Identities = 50/125 (40%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
Frame = +3
Query: 102 IKASALDLIGNTPIVALDRLHPG-PGRILAKCEFMNPGASIKCRSSLCMIKKALASGELK 278
I +LIGNTP+V L+R+ G GR+ AK E M P +S+K R MI A G +
Sbjct: 14 IAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLIT 73
Query: 279 P-KEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVEG 455
P K ++E TSGN G GLA + A G+ L L M S +R I ++A GA+ + + G
Sbjct: 74 PGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLG 133
Query: 456 TYGNV 470
G V
Sbjct: 134 MKGAV 138
>03_05_1124 +
30559633-30559674,30559781-30559890,30559973-30560030,
30560455-30560718,30560803-30560940,30561264-30561315,
30561525-30561604,30561929-30561988,30562084-30562164,
30562299-30562376,30563548-30563676,30563896-30564039,
30564145-30564290,30564402-30564558,30564657-30564715,
30564800-30564959,30565054-30565203,30565309-30565445,
30565531-30565677,30565995-30566052,30566417-30566518,
30566590-30566627,30566846-30566972,30567053-30567223,
30567313-30567444,30567575-30567681,30567815-30567875,
30567970-30568147,30568245-30568450,30568781-30568879,
30569021-30569236,30569333-30569472,30569559-30569660,
30569747-30569861,30570129-30570194,30570323-30570480,
30570594-30570690,30570931-30571137,30571435-30571505,
30571648-30571747,30571836-30571892,30571969-30572025,
30572108-30572188,30572319-30572401,30572504-30572651
Length = 1722
Score = 77.4 bits (182), Expect = 6e-15
Identities = 50/134 (37%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Frame = +3
Query: 102 IKASALDLIGNTPIVALDRLHPG-PGRILAKCEFMNPGASIKCRSSLCMIKKALASGELK 278
I + LIGNTP+V L+++ G +I AK E M P +S+K R MI A G +
Sbjct: 8 IASDVTALIGNTPLVYLNKVVDGCEAQIAAKLEIMEPCSSVKDRIGYSMITDAEEKGLIT 67
Query: 279 P-KEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVEG 455
P K ++E TSGN G GLA + A G+ L L M S +R I ++A GA+ V + G
Sbjct: 68 PGKSVLIEPTSGNTGIGLAFMAAAKGYKLILTMPASMSMERRIILKAFGAELVLTDPLLG 127
Query: 456 TYGNVTLNDVKAVE 497
G + D A +
Sbjct: 128 MKGAIQKADELAAK 141
>01_06_1119 -
34640611-34640721,34640995-34641075,34641437-34641496,
34641596-34641645,34641758-34641809,34642462-34642599,
34642716-34642979,34643057-34643114,34643178-34643287,
34643650-34643925
Length = 399
Score = 68.1 bits (159), Expect = 4e-12
Identities = 44/123 (35%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
Frame = +3
Query: 102 IKASALDLIGNTPIVALDRLHPG-PGRILAKCEFMNPGASIKCRSSLCMIKKALASGELK 278
I LIG TP+V L+ + G I AK E+M P S+K R L MI A G +
Sbjct: 86 IAQDVTQLIGKTPMVYLNNVVDGCVANIAAKLEYMGPCRSVKDRIGLSMINDAEEKGLIF 145
Query: 279 PKEPV-VEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVEG 455
P + + VE T+GN G GLA V A G+ L + +R + + A GA+ V +G
Sbjct: 146 PNKTILVEPTTGNTGIGLASVAAARGYKLIATVPSSIDVERCVLLRAFGAEIVLTDPNKG 205
Query: 456 TYG 464
G
Sbjct: 206 LKG 208
>06_01_0358 +
2573241-2573324,2573509-2573636,2573769-2573971,
2574129-2574254,2574522-2574680,2574857-2575050,
2575251-2575376
Length = 339
Score = 62.9 bits (146), Expect = 1e-10
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
Frame = +3
Query: 69 AMANNNSVDNEIKASALDLIGNTPIVALDRLHPGPG---RILAKCEFMNPGASIKCRSSL 239
++ N++S D I L+G TP++ L+R+ G RI+ K E P S+K RS+L
Sbjct: 11 SLLNSSSSDEHIATDITQLVGWTPLIELNRIVRKDGVNARIVGKLESYQPLCSVKDRSAL 70
Query: 240 CMIKKALASGELKPK-EPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEA 416
MI+ A G + P +VE TSGN G G+A + G+ M S + + +
Sbjct: 71 RMIEDAEEKGLISPGVTTLVEPTSGNLGIGVAYNALLKGYRFVAVMPAEYSLDKQMLLTY 130
Query: 417 LGAKCVRVPQVEGTYGNV 470
LGA+ + G G +
Sbjct: 131 LGAEVILTDPTLGFQGQL 148
>01_07_0387 -
43224718-43224810,43224990-43225070,43225676-43225735,
43227129-43227208,43227285-43227336,43227412-43227549,
43227627-43227944,43229381-43229438,43229520-43229629,
43230041-43230280
Length = 409
Score = 61.3 bits (142), Expect = 4e-10
Identities = 47/137 (34%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Frame = +3
Query: 120 DLIGNTPIVALDRLHPG-PGRILAKCEFMNPGASIKCRSSLCMIKKA-----LASGELKP 281
DLIG TP+V L+ + G + AK E M P S+K R MI A + G+L P
Sbjct: 80 DLIGKTPMVYLNNIVKGCVANVAAKLEIMEPCCSVKDRIGYSMISDAEEKGLITPGKLSP 139
Query: 282 KE--------------PVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEAL 419
+ +VE TSGN G GLA + A G+ L L M S +R + ++A
Sbjct: 140 SDLPCMTYYFMLYAQSVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSMERRVLLKAF 199
Query: 420 GAKCVRVPQVEGTYGNV 470
GA+ V +G G V
Sbjct: 200 GAELVLTDAAKGMKGAV 216
>03_02_0162 +
6053144-6053365,6053474-6053548,6054477-6054623,
6054749-6055300,6055387-6055622,6055914-6056130
Length = 482
Score = 60.5 bits (140), Expect = 8e-10
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +3
Query: 117 LDLIGNTPIVALDRLHPGPG-RILAKCEFMNPGASIKCRSSLCMIKKALASGELKPKEPV 293
++ IGNTP++ ++ L G IL K EF+NPG S+K R ++ +I++AL SG+L V
Sbjct: 53 VEAIGNTPLIRINSLSDATGCEILGKAEFLNPGGSVKDRVAVKIIEEALESGDLLCGGTV 112
Query: 294 VEVTSGNQGCGLAVVCAVLG 353
E ++G+ LA+V G
Sbjct: 113 TEGSAGSTAISLAIVAPAYG 132
>06_03_0487 -
21352955-21353080,21353164-21353357,21353815-21353973,
21354117-21354242,21354502-21354704,21354892-21355019,
21355323-21355565,21356734-21356928
Length = 457
Score = 56.8 bits (131), Expect = 9e-09
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Frame = +3
Query: 84 NSVDNEIKASALDLIGNTPIVALDRLHPGPG---RILAKCEFMNPGASIKCRSSLCMIKK 254
+S + I ++ LIG TP+V + + G R++ K E P S+K RS+L MI+
Sbjct: 134 SSREENIASNITQLIGWTPLVEMKNIAKNEGVQARLVGKMEAYQPLCSVKDRSALRMIED 193
Query: 255 ALASGELKPK-EPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKC 431
A G + P ++E TSGN G GL +V G+ M S + + + LGA+
Sbjct: 194 AEEKGLITPGVTTLIEPTSGNLGIGLVLVAVQKGYRFIAVMPAKYSLDKQMLLRFLGAEL 253
Query: 432 VRVPQVEGTYG 464
+ G G
Sbjct: 254 ILTDPAIGFNG 264
>06_03_0486 -
21344680-21344805,21344922-21345115,21350027-21350185,
21350428-21350553,21350784-21350986,21351169-21351296,
21351631-21351741
Length = 348
Score = 54.0 bits (124), Expect = 7e-08
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Frame = +3
Query: 93 DNEIKASALDLIGNTPIVALDRLHPGPG---RILAKCEFMNPGASIKCRSSLCMIKKALA 263
+ I ++ LIG TP++ + + G R++ K E P S+K R++L M++ A
Sbjct: 28 EEAIASNVAQLIGWTPLIEMKNIAKKEGIQARLVGKMEAYQPLFSVKDRTALGMVEDAEE 87
Query: 264 SGELKPK-EPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRV 440
G + P ++E T GN G GL +V G+ M G S + + + LGA+ +
Sbjct: 88 KGLITPGVTTLIEPTGGNLGTGLVLVAIQRGYRFIAVMPAGYSLDKQMLLRFLGAEVILT 147
Query: 441 PQVEGTYG 464
G G
Sbjct: 148 DPAGGFKG 155
>06_03_0491 -
21383036-21383161,21383246-21383439,21383627-21383785,
21383904-21384029,21384290-21384492,21384691-21384818,
21385691-21385783
Length = 342
Score = 53.6 bits (123), Expect = 9e-08
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Frame = +3
Query: 93 DNEIKASALDLIGNTPIVALDRLHPGPG---RILAKCEFMNPGASIKCRSSLCMIKKALA 263
+ I ++ LIG TP++ + + G R++ K E P S+K R++L MI+ A
Sbjct: 22 EETIASNIAQLIGWTPLIEMKNIPKKEGIQTRLIGKMETYQPLFSVKDRTALSMIEDAEE 81
Query: 264 SGELKPK-EPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRV 440
G + P ++E TSGN G GL +V G+ M S + + + LGA+ +
Sbjct: 82 KGLITPGVTTLIEPTSGNLGIGLVLVAIQKGYRFIAVMPARYSPDKQMLLRFLGAELILT 141
Query: 441 PQVEGTYG 464
G G
Sbjct: 142 DPAGGYKG 149
>06_03_0488 -
21361131-21361226,21361922-21362124,21362252-21362410,
21362694-21362813,21365602-21365801,21366243-21366286
Length = 273
Score = 40.3 bits (90), Expect = 9e-04
Identities = 29/87 (33%), Positives = 43/87 (49%)
Frame = +3
Query: 243 MIKKALASGELKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALG 422
MI+ A G + P + ++E TSGN G GLA V G+ + + ++ LG
Sbjct: 16 MIEDAEKRGSISPGDTLIEATSGNLGIGLAAVAIQKGYKFIAVIPNSYPPDKQKLIKYLG 75
Query: 423 AKCVRVPQVEGTYGNVTLNDVKAVEEV 503
A+ VR+ EG Y N+ K VEE+
Sbjct: 76 AE-VRI--TEGPYRNME----KKVEEL 95
>06_01_0359 +
2578179-2578291,2578950-2579152,2579319-2579444,
2579742-2579900,2580058-2580251,2580382-2580507
Length = 306
Score = 31.1 bits (67), Expect = 0.53
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 243 MIKKALASGELKPK-EPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEAL 419
MI+ A G + P +VE TSGN G GL +V G+ M S + I ++ +
Sbjct: 39 MIEDAEEKGLITPGVTTLVEPTSGNLGLGLVLVALRKGYRFVAVMPGQYSFDKQILLKYM 98
Query: 420 GAK 428
GA+
Sbjct: 99 GAE 101
>10_08_0725 + 20126821-20127528
Length = 235
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = -3
Query: 495 PLLLHRSKSRFRTCLPLAELLRIWPREPPYVW---PFEHCFLLTWQALADDPIQ 343
P+LLH + + + L + WP PP V P+E W A DD ++
Sbjct: 57 PVLLHAGRPVNESQVILQYIDEAWPDRPPAVLPSDPYERAVARFWAAYVDDKVR 110
>02_04_0363 +
22369461-22370127,22370240-22370310,22370412-22370978,
22371056-22371301
Length = 516
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 287 ASCGSDIGKSRMWARRRVCCIGSSANACHVKRKQCSKGH 403
A+C D+GK R A R+VC IG+ R+ +GH
Sbjct: 2 AACVDDVGKPR--ASRKVCVIGAGMAGLAAARELRREGH 38
>11_05_0059 - 18724619-18725053
Length = 144
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +2
Query: 365 ACHVKRKQC---SKGHTYGGSRGQMRKSSASGRHVRKRD 472
+CH +R+ C S+G + GG R +R+ A +H+ + +
Sbjct: 21 SCHHRRRHCCWWSRGRSRGGDREAVREVGALPKHMMEAE 59
>04_04_0373 -
24785799-24786200,24787979-24788161,24790909-24791170,
24791565-24791656
Length = 312
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +3
Query: 282 KEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRV 440
+E V VT N+G GLA+ + H +T+ ++ ++ + AL A+ + V
Sbjct: 36 RETVAVVTGANRGIGLALAARLGEHGITVVLTARDAERGEAAAAALRARGLHV 88
>05_04_0304 - 20048518-20049003,20049074-20049412
Length = 274
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 495 PLLLHRSKSRFRTCLPLAELLRIWPREPPYV--WPFEHCFLLTWQALADDPI 346
P+L+HR + + + L L WP P + PF+ W ADD +
Sbjct: 63 PVLVHRGRPLAESVIILQYLDDAWPESRPLLPSDPFDRALARFWCHFADDKL 114
>02_05_0795 - 31792231-31794780
Length = 849
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -3
Query: 483 HRSKSRFRTCLPLAEL-LRIWPREPPYVWPFEHCFL 379
H + + PL +L + W ++ PY +HCF+
Sbjct: 435 HLANLEYANAAPLVDLSMAFWDQDDPYEMGGDHCFI 470
>07_03_1000 - 23220878-23221821,23222164-23223001
Length = 593
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +3
Query: 288 PVVEVTSGNQGCGLAVVCAVLGHPLTLAMS 377
P V VT+G G G A A LG+ LTLA+S
Sbjct: 90 PAVNVTAGGAGAGAAGRGAELGY-LTLAVS 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,782,770
Number of Sequences: 37544
Number of extensions: 368121
Number of successful extensions: 1007
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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