Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8a12
         (506 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   1.5  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   4.5  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   7.9  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   7.9  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +3

Query: 402 IHMEALGAKCVRVPQVEGTYGNVT 473
           I+M  L  KC++   ++G++GN+T
Sbjct: 291 IYMGVLTQKCIKEFPLDGSWGNLT 314


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 334 SCVLYWVIR*RLPCQ 378
           SCV+Y+V R R PC+
Sbjct: 598 SCVVYFVRRRRQPCK 612


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +2

Query: 470 DFERCKSSGGS 502
           DFER +SSGGS
Sbjct: 691 DFERLESSGGS 701


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 429 IWPREPPYVWP 397
           ++P+ PP VWP
Sbjct: 386 LFPQHPPLVWP 396


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,738
Number of Sequences: 2352
Number of extensions: 12445
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)