Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8a12
         (506 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058508-1|AAL13737.1|  522|Drosophila melanogaster LD21426p pro...    92   3e-19
AE014298-3078|AAF50863.1|  522|Drosophila melanogaster CG1753-PB...    92   3e-19
AE014298-3077|AAF50862.1|  522|Drosophila melanogaster CG1753-PA...    92   3e-19
AY051725-1|AAK93149.1|  799|Drosophila melanogaster LD25466p pro...    29   2.7  
AE014134-2234|AAF53216.1|  799|Drosophila melanogaster CG5776-PA...    29   2.7  
BT022124-1|AAY51519.1|  882|Drosophila melanogaster IP09048p pro...    29   4.8  
AE014297-2045|AAF55197.2|  943|Drosophila melanogaster CG6118-PA...    29   4.8  
X59275-1|CAA41965.1| 1603|Drosophila melanogaster posterior sex ...    28   6.3  
DQ022546-1|AAZ20649.1|  907|Drosophila melanogaster truncated po...    28   6.3  
DQ022543-1|AAZ20647.1| 1095|Drosophila melanogaster truncated po...    28   6.3  
DQ022542-1|AAZ20646.1| 1601|Drosophila melanogaster posterior se...    28   6.3  
DQ022540-1|AAZ20644.1| 1601|Drosophila melanogaster posterior se...    28   6.3  
DQ022539-1|AAZ20643.1| 1095|Drosophila melanogaster truncated po...    28   6.3  
DQ022538-1|AAZ20642.1| 1450|Drosophila melanogaster truncated po...    28   6.3  
DQ022537-1|AAZ20641.1| 1072|Drosophila melanogaster truncated po...    28   6.3  
AE013599-1624|AAF58434.1| 1601|Drosophila melanogaster CG3886-PA...    28   6.3  

>AY058508-1|AAL13737.1|  522|Drosophila melanogaster LD21426p
           protein.
          Length = 522

 Score = 92.3 bits (219), Expect = 3e-19
 Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
 Frame = +3

Query: 99  EIKASALDLIGNTPIVALDRLHPGPG---RILAKCEFMNPGASIKCRSSLCMIKKALASG 269
           +I  + L++IG TP+V L+ +    G    + AKCEF+NPG S+K R    M++ A   G
Sbjct: 44  QITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQG 103

Query: 270 ELKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQV 449
            LKP   ++E TSGN G GLA+ CAV G+   + M +  S ++   +  LGAK +R P  
Sbjct: 104 LLKPGYTIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTP-T 162

Query: 450 EGTY 461
           E  Y
Sbjct: 163 EAAY 166


>AE014298-3078|AAF50863.1|  522|Drosophila melanogaster CG1753-PB,
           isoform B protein.
          Length = 522

 Score = 92.3 bits (219), Expect = 3e-19
 Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
 Frame = +3

Query: 99  EIKASALDLIGNTPIVALDRLHPGPG---RILAKCEFMNPGASIKCRSSLCMIKKALASG 269
           +I  + L++IG TP+V L+ +    G    + AKCEF+NPG S+K R    M++ A   G
Sbjct: 44  QITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQG 103

Query: 270 ELKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQV 449
            LKP   ++E TSGN G GLA+ CAV G+   + M +  S ++   +  LGAK +R P  
Sbjct: 104 LLKPGYTIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTP-T 162

Query: 450 EGTY 461
           E  Y
Sbjct: 163 EAAY 166


>AE014298-3077|AAF50862.1|  522|Drosophila melanogaster CG1753-PA,
           isoform A protein.
          Length = 522

 Score = 92.3 bits (219), Expect = 3e-19
 Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
 Frame = +3

Query: 99  EIKASALDLIGNTPIVALDRLHPGPG---RILAKCEFMNPGASIKCRSSLCMIKKALASG 269
           +I  + L++IG TP+V L+ +    G    + AKCEF+NPG S+K R    M++ A   G
Sbjct: 44  QITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQG 103

Query: 270 ELKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQV 449
            LKP   ++E TSGN G GLA+ CAV G+   + M +  S ++   +  LGAK +R P  
Sbjct: 104 LLKPGYTIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTP-T 162

Query: 450 EGTY 461
           E  Y
Sbjct: 163 EAAY 166


>AY051725-1|AAK93149.1|  799|Drosophila melanogaster LD25466p
           protein.
          Length = 799

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 6/107 (5%)
 Frame = +3

Query: 150 LDRLHPG---PGRILAKCEFMNPGASIKCRSSLCMIKKALASGELKPKEPVVEVTSGNQG 320
           +D LHP     GR+  + E   P +  +     C+IK        +  E V  +T G  G
Sbjct: 427 IDTLHPSIRRAGRLDNEVELGAPSSQARLEIVRCLIKSVEHQLSDEEVEHVASITHGYVG 486

Query: 321 CGLA--VVCAVL-GHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVE 452
             LA  V  A+L   P  L M    +A   I   A+    +  P V+
Sbjct: 487 ADLANLVYAAMLQAQPNPLQMPHLQAALTRIKPSAMREVLIECPNVQ 533


>AE014134-2234|AAF53216.1|  799|Drosophila melanogaster CG5776-PA
           protein.
          Length = 799

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 6/107 (5%)
 Frame = +3

Query: 150 LDRLHPG---PGRILAKCEFMNPGASIKCRSSLCMIKKALASGELKPKEPVVEVTSGNQG 320
           +D LHP     GR+  + E   P +  +     C+IK        +  E V  +T G  G
Sbjct: 427 IDTLHPSIRRAGRLDNEVELGAPSSQARLEIVRCLIKSVEHQLSDEEVEHVASITHGYVG 486

Query: 321 CGLA--VVCAVL-GHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVE 452
             LA  V  A+L   P  L M    +A   I   A+    +  P V+
Sbjct: 487 ADLANLVYAAMLQAQPNPLQMPHLQAALTRIKPSAMREVLIECPNVQ 533


>BT022124-1|AAY51519.1|  882|Drosophila melanogaster IP09048p
           protein.
          Length = 882

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 10/38 (26%), Positives = 24/38 (63%)
 Frame = -2

Query: 295 TTGSLGFSSPEANAFLIMQSDDRHLIDAPGFMNSHFAK 182
           + GSL  +  ++N+F I+Q++ + ++D+    + + AK
Sbjct: 534 SNGSLNLTEADSNSFAILQANSKKMLDSARKQHKYLAK 571


>AE014297-2045|AAF55197.2|  943|Drosophila melanogaster CG6118-PA
           protein.
          Length = 943

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 10/38 (26%), Positives = 24/38 (63%)
 Frame = -2

Query: 295 TTGSLGFSSPEANAFLIMQSDDRHLIDAPGFMNSHFAK 182
           + GSL  +  ++N+F I+Q++ + ++D+    + + AK
Sbjct: 595 SNGSLNLTEADSNSFAILQANSKKMLDSARKQHKYLAK 632


>X59275-1|CAA41965.1| 1603|Drosophila melanogaster posterior sex
           combs protein.
          Length = 1603

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +3

Query: 216 SIKCRSSLCMIKKALASGELKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQ 395
           SI  +   CM  K++AS + K KEPV  V+   +   L+     +   + L ++ GNS+ 
Sbjct: 748 SILMKPPSCMPPKSIASSKRKSKEPVKAVSKKQK---LSPPLPTVDFKIRLPVTNGNSSG 804

Query: 396 RA 401
            A
Sbjct: 805 TA 806


>DQ022546-1|AAZ20649.1|  907|Drosophila melanogaster truncated
           posterior sex combs protein.
          Length = 907

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +3

Query: 216 SIKCRSSLCMIKKALASGELKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQ 395
           SI  +   CM  K++AS + K KEPV  V+   +   L+     +   + L ++ GNS+ 
Sbjct: 746 SILMKPPSCMPPKSIASSKRKSKEPVKAVSKKQK---LSPPLPTVDFKIRLPVTNGNSSG 802

Query: 396 RA 401
            A
Sbjct: 803 TA 804


>DQ022543-1|AAZ20647.1| 1095|Drosophila melanogaster truncated
           posterior sex combs protein.
          Length = 1095

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +3

Query: 216 SIKCRSSLCMIKKALASGELKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQ 395
           SI  +   CM  K++AS + K KEPV  V+   +   L+     +   + L ++ GNS+ 
Sbjct: 746 SILMKPPSCMPPKSIASSKRKSKEPVKAVSKKQK---LSPPLPTVDFKIRLPVTNGNSSG 802

Query: 396 RA 401
            A
Sbjct: 803 TA 804


>DQ022542-1|AAZ20646.1| 1601|Drosophila melanogaster posterior sex
           combs protein.
          Length = 1601

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +3

Query: 216 SIKCRSSLCMIKKALASGELKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQ 395
           SI  +   CM  K++AS + K KEPV  V+   +   L+     +   + L ++ GNS+ 
Sbjct: 746 SILMKPPSCMPPKSIASSKRKSKEPVKAVSKKQK---LSPPLPTVDFKIRLPVTNGNSSG 802

Query: 396 RA 401
            A
Sbjct: 803 TA 804


>DQ022540-1|AAZ20644.1| 1601|Drosophila melanogaster posterior sex
           combs protein.
          Length = 1601

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +3

Query: 216 SIKCRSSLCMIKKALASGELKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQ 395
           SI  +   CM  K++AS + K KEPV  V+   +   L+     +   + L ++ GNS+ 
Sbjct: 746 SILMKPPSCMPPKSIASSKRKSKEPVKAVSKKQK---LSPPLPTVDFKIRLPVTNGNSSG 802

Query: 396 RA 401
            A
Sbjct: 803 TA 804


>DQ022539-1|AAZ20643.1| 1095|Drosophila melanogaster truncated
           posterior sex combs protein.
          Length = 1095

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +3

Query: 216 SIKCRSSLCMIKKALASGELKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQ 395
           SI  +   CM  K++AS + K KEPV  V+   +   L+     +   + L ++ GNS+ 
Sbjct: 746 SILMKPPSCMPPKSIASSKRKSKEPVKAVSKKQK---LSPPLPTVDFKIRLPVTNGNSSG 802

Query: 396 RA 401
            A
Sbjct: 803 TA 804


>DQ022538-1|AAZ20642.1| 1450|Drosophila melanogaster truncated
           posterior sex combs protein.
          Length = 1450

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +3

Query: 216 SIKCRSSLCMIKKALASGELKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQ 395
           SI  +   CM  K++AS + K KEPV  V+   +   L+     +   + L ++ GNS+ 
Sbjct: 746 SILMKPPSCMPPKSIASSKRKSKEPVKAVSKKQK---LSPPLPTVDFKIRLPVTNGNSSG 802

Query: 396 RA 401
            A
Sbjct: 803 TA 804


>DQ022537-1|AAZ20641.1| 1072|Drosophila melanogaster truncated
           posterior sex combs protein.
          Length = 1072

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +3

Query: 216 SIKCRSSLCMIKKALASGELKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQ 395
           SI  +   CM  K++AS + K KEPV  V+   +   L+     +   + L ++ GNS+ 
Sbjct: 746 SILMKPPSCMPPKSIASSKRKSKEPVKAVSKKQK---LSPPLPTVDFKIRLPVTNGNSSG 802

Query: 396 RA 401
            A
Sbjct: 803 TA 804


>AE013599-1624|AAF58434.1| 1601|Drosophila melanogaster CG3886-PA
           protein.
          Length = 1601

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +3

Query: 216 SIKCRSSLCMIKKALASGELKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQ 395
           SI  +   CM  K++AS + K KEPV  V+   +   L+     +   + L ++ GNS+ 
Sbjct: 746 SILMKPPSCMPPKSIASSKRKSKEPVKAVSKKQK---LSPPLPTVDFKIRLPVTNGNSSG 802

Query: 396 RA 401
            A
Sbjct: 803 TA 804


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,913,175
Number of Sequences: 53049
Number of extensions: 602453
Number of successful extensions: 1595
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1592
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)