Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8a12
(506 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78415-10|CAB01676.2| 341|Caenorhabditis elegans Hypothetical p... 78 4e-15
Z72518-3|CAB63415.2| 704|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z49131-7|CAA88980.3| 704|Caenorhabditis elegans Hypothetical pr... 77 1e-14
AF016425-2|AAB65342.1| 337|Caenorhabditis elegans Hypothetical ... 73 2e-13
U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical pr... 72 3e-13
U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical pr... 72 3e-13
AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical ... 70 8e-13
Z83236-2|CAB05778.1| 337|Caenorhabditis elegans Hypothetical pr... 67 6e-12
AF077539-2|AAK84579.2| 427|Caenorhabditis elegans Hypothetical ... 49 2e-06
Z81054-11|CAB02888.1| 430|Caenorhabditis elegans Hypothetical p... 46 2e-05
Z70683-7|CAA94593.1| 430|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF039046-12|AAB94215.1| 299|Caenorhabditis elegans Hydroxy-acyl... 29 1.9
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 29 2.6
U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily ass... 28 3.4
Z81073-6|CAN86904.2| 215|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z81073-5|CAE17804.3| 242|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z34800-2|CAA84324.2| 842|Caenorhabditis elegans Hypothetical pr... 27 7.8
>Z78415-10|CAB01676.2| 341|Caenorhabditis elegans Hypothetical
protein C17G1.7 protein.
Length = 341
Score = 77.8 bits (183), Expect = 4e-15
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 3/134 (2%)
Frame = +3
Query: 96 NEIKASALDLIGNTPIVALDRLHPG-PGRILAKCEFMNPGASIKCRSSLCMIKKALASGE 272
N I +A LIGNTP+V +++L G PG + K E+MNP S+K R M+ A G
Sbjct: 5 NSIGENAAALIGNTPMVYINKLTKGLPGTVAVKIEYMNPAGSVKDRIGAAMLAAAEKDGT 64
Query: 273 LKP-KEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQV 449
+ P ++E TSGN G LA V A G+ + M S +R ++A G++ V
Sbjct: 65 VIPGVTTLIEPTSGNTGIALAFVAAAKGYRCIVTMPASMSGERRTLLKAYGSEVVLTDPA 124
Query: 450 EGTYGNVTL-NDVK 488
+G G + + N +K
Sbjct: 125 KGMKGAIDMANQLK 138
>Z72518-3|CAB63415.2| 704|Caenorhabditis elegans Hypothetical
protein ZC373.1 protein.
Length = 704
Score = 76.6 bits (180), Expect = 1e-14
Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Frame = +3
Query: 111 SALDLIGNTPIVALDRLHPGPG---RILAKCEFMNPGASIKCRSSLCMI---KKALASGE 272
+ LD IG TP+V L + G + KCE+MN G S K R + M+ +K G+
Sbjct: 381 TVLDAIGKTPLVKLQHIPKAHGVKCNVYVKCEYMNAGGSTKDRIAKRMVEIAEKTGKPGK 440
Query: 273 LKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVE 452
L P ++E TSGN G GL++ AV G+ + M K S +++I M +LG+ +R P
Sbjct: 441 LVPGVTLIEPTSGNTGIGLSLASAVRGYKCIITMPKKMSKEKSIAMASLGSTIIRTPNEA 500
Query: 453 G 455
G
Sbjct: 501 G 501
>Z49131-7|CAA88980.3| 704|Caenorhabditis elegans Hypothetical
protein ZC373.1 protein.
Length = 704
Score = 76.6 bits (180), Expect = 1e-14
Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Frame = +3
Query: 111 SALDLIGNTPIVALDRLHPGPG---RILAKCEFMNPGASIKCRSSLCMI---KKALASGE 272
+ LD IG TP+V L + G + KCE+MN G S K R + M+ +K G+
Sbjct: 381 TVLDAIGKTPLVKLQHIPKAHGVKCNVYVKCEYMNAGGSTKDRIAKRMVEIAEKTGKPGK 440
Query: 273 LKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVE 452
L P ++E TSGN G GL++ AV G+ + M K S +++I M +LG+ +R P
Sbjct: 441 LVPGVTLIEPTSGNTGIGLSLASAVRGYKCIITMPKKMSKEKSIAMASLGSTIIRTPNEA 500
Query: 453 G 455
G
Sbjct: 501 G 501
>AF016425-2|AAB65342.1| 337|Caenorhabditis elegans Hypothetical
protein F59A7.9 protein.
Length = 337
Score = 72.5 bits (170), Expect = 2e-13
Identities = 43/119 (36%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +3
Query: 120 DLIGNTPIVALDRLHPG-PGRILAKCEFMNPGASIKCRSSLCMIKKALASGELKP-KEPV 293
D +GNTP+V L + G RI K E++NP S+K R + M+ A +G++ P K +
Sbjct: 12 DTVGNTPLVLLRNITKGLDARIAVKIEYLNPSCSVKDRIAKTMVDDAEKAGKIVPGKTVL 71
Query: 294 VEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVEGTYGNV 470
VE TSGN G LA + + G+ + L M+ S +R + A GA+ + EG G V
Sbjct: 72 VEGTSGNLGIALAHIGRIRGYKVILVMTTAMSIERRAMLRAYGAEVILSDPAEGHPGIV 130
>U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical
protein R08E5.2c protein.
Length = 304
Score = 71.7 bits (168), Expect = 3e-13
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Frame = +3
Query: 120 DLIGNTPIVALDRLHPG-PGRILAKCEFMNPGASIKCRSSLCMIKKALASGELKP-KEPV 293
D IGNTP+V L + G RI K E++NP S+K R + M+ +A +G + P K +
Sbjct: 12 DTIGNTPLVLLRNISKGLDARIAVKVEYLNPSCSVKDRIAKSMVDEAEKAGTIVPGKTVL 71
Query: 294 VEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVEGTYG 464
VE TSGN G LA + + G+ + L M S +R + A GA+ + EG G
Sbjct: 72 VEGTSGNLGIALAHIGKIRGYKVILVMPATMSVERRAMLRAYGAEVILSDPAEGHPG 128
>U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical
protein R08E5.2a protein.
Length = 337
Score = 71.7 bits (168), Expect = 3e-13
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Frame = +3
Query: 120 DLIGNTPIVALDRLHPG-PGRILAKCEFMNPGASIKCRSSLCMIKKALASGELKP-KEPV 293
D IGNTP+V L + G RI K E++NP S+K R + M+ +A +G + P K +
Sbjct: 12 DTIGNTPLVLLRNISKGLDARIAVKVEYLNPSCSVKDRIAKSMVDEAEKAGTIVPGKTVL 71
Query: 294 VEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVEGTYG 464
VE TSGN G LA + + G+ + L M S +R + A GA+ + EG G
Sbjct: 72 VEGTSGNLGIALAHIGKIRGYKVILVMPATMSVERRAMLRAYGAEVILSDPAEGHPG 128
>AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical
protein F54A3.4 protein.
Length = 755
Score = 70.1 bits (164), Expect = 8e-13
Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 7/118 (5%)
Frame = +3
Query: 111 SALDLIGNTPIVALDRLHPGPG---RILAKCEFMNPGASIKCRSSLCMIKKALASGE--- 272
S LD IG TP+V L + G + KCEF+N G S K R + M++ A +G+
Sbjct: 339 SVLDAIGKTPLVKLQHVPKAHGVRCNVYVKCEFLNAGGSTKDRIAKKMVEIAEKTGKPGA 398
Query: 273 LKP-KEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVP 443
L P ++E TSGN G GL++V AV G+ + M + S +++ + LG+ VR P
Sbjct: 399 LTPGATTLIEPTSGNTGIGLSLVAAVRGYKCLITMPEKMSKEKSTTLSVLGSTIVRTP 456
>Z83236-2|CAB05778.1| 337|Caenorhabditis elegans Hypothetical
protein K10H10.2 protein.
Length = 337
Score = 67.3 bits (157), Expect = 6e-12
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 120 DLIGNTPIVALDRLHPGPGRILA-KCEFMNPGASIKCRSSLCMIKKALASGELKP-KEPV 293
+LIGNTP++ L+++ G +A K E+MNP S+K R + MI A +G + P K +
Sbjct: 12 ELIGNTPLLKLNKIGKDLGASIAVKVEYMNPACSVKDRIAFNMIDTAEKAGLITPGKTVL 71
Query: 294 VEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVEGTYGNV 470
+E TSGN G LA + G+ + L M S +R ++A GA+ + G V
Sbjct: 72 IEPTSGNMGIALAYCGKLRGYKVILTMPASMSIERRCLLKAYGAEVILTDPATAVKGAV 130
>AF077539-2|AAK84579.2| 427|Caenorhabditis elegans Hypothetical
protein T25D3.3 protein.
Length = 427
Score = 48.8 bits (111), Expect = 2e-06
Identities = 34/111 (30%), Positives = 51/111 (45%)
Frame = +3
Query: 111 SALDLIGNTPIVALDRLHPGPGRILAKCEFMNPGASIKCRSSLCMIKKALASGELKPKEP 290
S +L+G+TPI +D R++ K E + S+K R S ++ AL G +K
Sbjct: 57 SERNLMGSTPIHVIDPPGLPSVRLVFKNESASLTGSLKHRYSWSLMMWALLEGHVKNGTH 116
Query: 291 VVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVP 443
V E +SGN C L +C +LG T + + +E VRVP
Sbjct: 117 VFEASSGNTACSLGYMCRLLGLQFTAVVPDTIEQVKVRRIEEQEGFVVRVP 167
>Z81054-11|CAB02888.1| 430|Caenorhabditis elegans Hypothetical
protein F01D4.8 protein.
Length = 430
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Frame = +3
Query: 126 IGNTPIVALDRLHPG-PGR-ILAKCEFMNPGASIKCRSSLCMIKKALASGELKPKEPVV- 296
+G+TP+V PG P I K E ++ ++K R + ++ A+ G++ K V
Sbjct: 56 MGHTPLVKFSP--PGFPNTDIFFKNETVSATRTLKHRFAWALLLWAIVEGKVTSKTSAVY 113
Query: 297 EVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVP 443
+ TSGN G A +C ++G P +S+ ++ ++E G K ++VP
Sbjct: 114 DATSGNMGSAEAYMCTLVGIPYFAVVSEECEQEKIDNIEKFGGKVIKVP 162
>Z70683-7|CAA94593.1| 430|Caenorhabditis elegans Hypothetical
protein F01D4.8 protein.
Length = 430
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Frame = +3
Query: 126 IGNTPIVALDRLHPG-PGR-ILAKCEFMNPGASIKCRSSLCMIKKALASGELKPKEPVV- 296
+G+TP+V PG P I K E ++ ++K R + ++ A+ G++ K V
Sbjct: 56 MGHTPLVKFSP--PGFPNTDIFFKNETVSATRTLKHRFAWALLLWAIVEGKVTSKTSAVY 113
Query: 297 EVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVP 443
+ TSGN G A +C ++G P +S+ ++ ++E G K ++VP
Sbjct: 114 DATSGNMGSAEAYMCTLVGIPYFAVVSEECEQEKIDNIEKFGGKVIKVP 162
>AF039046-12|AAB94215.1| 299|Caenorhabditis elegans
Hydroxy-acyl-coa dehydrogenaseprotein 1 protein.
Length = 299
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 264 SGELKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTL 368
SG PK V +G G G+A VC G+P+ L
Sbjct: 4 SGNENPKPLVAIFGAGMMGSGIAQVCLQAGYPVNL 38
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 499 SSTAFTSFKVTFPYVPSTCG 440
SS++F SF+ +FP +P CG
Sbjct: 90 SSSSFDSFEASFPTIPKFCG 109
>U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily
assigned gene nameprotein 158 protein.
Length = 1003
Score = 28.3 bits (60), Expect = 3.4
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Frame = +3
Query: 15 GITVVNKCLSV*LFSLSCAMANNNSVDNEI-KASALDLIGNTPIVALDRLHPGPGRILAK 191
G N S FSL A ++DN + + +G +VAL P P +L
Sbjct: 363 GTIAANLTTSFVYFSL--AFIFGGAIDNAVLRDKNGQSVGGQMVVAL-LSWPSPWVLLIG 419
Query: 192 CEFMNPGASIKCRSSLCMIKKALASGELKP-KEPVVEVTSGNQ 317
GA+++C S + +A+A E+ P P +VT+ N+
Sbjct: 420 SFLSTFGAALQCLCSAPRLLQAIAKDEVIPLLSPFKKVTANNE 462
>Z81073-6|CAN86904.2| 215|Caenorhabditis elegans Hypothetical
protein F30F8.10b protein.
Length = 215
Score = 27.1 bits (57), Expect = 7.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 411 EALGAKCVRVPQVEGTYGNVTLNDV 485
E L C V + GTY NVT DV
Sbjct: 170 EQLADGCTYVKYINGTYTNVTFTDV 194
>Z81073-5|CAE17804.3| 242|Caenorhabditis elegans Hypothetical
protein F30F8.10a protein.
Length = 242
Score = 27.1 bits (57), Expect = 7.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 411 EALGAKCVRVPQVEGTYGNVTLNDV 485
E L C V + GTY NVT DV
Sbjct: 197 EQLADGCTYVKYINGTYTNVTFTDV 221
>Z34800-2|CAA84324.2| 842|Caenorhabditis elegans Hypothetical
protein F45H7.2a protein.
Length = 842
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 347 IGSSANACHVKRKQCSKGHTYGGSRGQMRKSSASGRHVRKRD 472
+G S ++ R S H YGGS +M S++S H + D
Sbjct: 45 VGGSHHSNTWSRPSGSDHHVYGGSLARMPNSTSSAWHHQMAD 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,925,237
Number of Sequences: 27780
Number of extensions: 292786
Number of successful extensions: 799
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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