Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8a04
         (555 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   0.44 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   2.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.5  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   9.5  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 468 TNPSEQRWIVRILFIVPI 521
           T PSEQ+W + +L I P+
Sbjct: 372 TVPSEQQWGILVLIIAPL 389


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 409 NIPAMTCALRVCRNMGSC 356
           NI    C+   CRN GSC
Sbjct: 104 NINTDDCSPNPCRNNGSC 121


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 245 KQCDNNL*SNSQNEYHRYGEY 307
           +Q +NN  +N+QN +H  G +
Sbjct: 309 QQNNNNAATNNQNHHHHAGHH 329



 Score = 22.2 bits (45), Expect = 3.1
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 365 HIPADPQRAGHRGNIRVHGSIHYLP 439
           HIPA        G IR HG  +Y P
Sbjct: 56  HIPAKRAAYDCEGVIRHHGQWNYSP 80


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +3

Query: 405  IFVFTALFITCQQIYQHLRW 464
            +FV     +T ++ Y H++W
Sbjct: 1278 LFVLIVFLLTLKKDYLHIKW 1297


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +3

Query: 405  IFVFTALFITCQQIYQHLRW 464
            +FV     +T ++ Y H++W
Sbjct: 1278 LFVLIVFLLTLKKDYLHIKW 1297


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +1

Query: 409 SCSRLYSLLANRYTSICVGTQTHQSN 486
           +CS++ S + ++YT+  + T  H  N
Sbjct: 334 TCSQIPSEVEDKYTTYFLNTYPHLFN 359


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 417 TALFITCQQIYQHLRW 464
           T +FITC+  +  L W
Sbjct: 130 TQIFITCELFFVILLW 145


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 523 YIGTINRIRTIQRCSDGFVYQRKCWYICW 437
           YI  I +    Q+ SD F++     +I W
Sbjct: 134 YIDMIIKKNVTQQNSDVFIFDNVWLFILW 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,317
Number of Sequences: 336
Number of extensions: 3096
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)