Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8a04
         (555 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   1.7  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   1.7  
DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domai...    23   8.9  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   8.9  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +2

Query: 416 HGSIH--YLPTDIPAFALVHKPIRATLDRANPIYRP 517
           H  +H  Y P+      +V +P RA+L+R + ++RP
Sbjct: 193 HTGLHHYYQPSPSHPQPIVPQPQRASLERRDSLFRP 228


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +2

Query: 416 HGSIH--YLPTDIPAFALVHKPIRATLDRANPIYRP 517
           H  +H  Y P+      +V +P RA+L+R + ++RP
Sbjct: 193 HTGLHHYYQPSPSHPQPIVPQPQRASLERRDSLFRP 228


>DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 103

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 171 CRKSTEFVCNMCAVFITC 224
           CRK+ EFVC    V  TC
Sbjct: 38  CRKNEEFVCCGPCVEPTC 55


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 438 QQIYQHLRWYTNPS 479
           +Q+YQHL  Y  PS
Sbjct: 485 KQVYQHLAKYRTPS 498


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,224
Number of Sequences: 2352
Number of extensions: 12231
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)