Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8a04
         (555 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029687-1|ABL75744.1|  486|Drosophila melanogaster IP17403p pro...   122   3e-28
AY052085-1|AAK93509.1|  403|Drosophila melanogaster SD03655p pro...   122   3e-28
AE014296-291|AAN11491.1|  403|Drosophila melanogaster CG12004-PB...   122   3e-28
AE014296-290|AAF47516.2|  403|Drosophila melanogaster CG12004-PA...   122   3e-28
AY051817-1|AAK93241.1|  491|Drosophila melanogaster LD32366p pro...    52   4e-07
AE014134-1743|AAF52840.2|  491|Drosophila melanogaster CG5850-PA...    52   4e-07
AE014134-1742|ABI31304.1|  569|Drosophila melanogaster CG5850-PB...    52   4e-07
AE014134-3008|AAF53733.1|  561|Drosophila melanogaster CG15170-P...    33   0.20 
BT023018-1|AAY55434.1|  281|Drosophila melanogaster IP08521p pro...    32   0.45 
AE014296-3749|AAN12212.1|  252|Drosophila melanogaster CG32461-P...    32   0.45 
BT015990-1|AAV36875.1| 1449|Drosophila melanogaster RE54461p pro...    31   1.0  
AY051455-1|AAK92879.1| 1126|Drosophila melanogaster GH12050p pro...    31   1.0  
AE014134-732|AAN10345.1| 1126|Drosophila melanogaster CG3054-PB,...    31   1.0  
AE014134-731|AAF51018.3| 1449|Drosophila melanogaster CG3054-PA,...    31   1.0  
AY060780-1|AAL28328.1|  627|Drosophila melanogaster GH25012p pro...    29   3.2  
AE014297-2068|AAF55215.2|  627|Drosophila melanogaster CG5404-PA...    29   3.2  

>BT029687-1|ABL75744.1|  486|Drosophila melanogaster IP17403p
           protein.
          Length = 486

 Score =  122 bits (294), Expect = 3e-28
 Identities = 55/72 (76%), Positives = 62/72 (86%)
 Frame = +3

Query: 339 DVLKPLQEPIFLQTRSAQVIAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVP 518
           D L  + + IFLQT++AQV+AG+ V+ ALFITCQQIYQHLRWYTNP EQRWIVRILFIVP
Sbjct: 50  DPLLHVGDGIFLQTKTAQVLAGVCVWAALFITCQQIYQHLRWYTNPQEQRWIVRILFIVP 109

Query: 519 IYGCYSWISLLF 554
           IY  YSWISLLF
Sbjct: 110 IYATYSWISLLF 121


>AY052085-1|AAK93509.1|  403|Drosophila melanogaster SD03655p
           protein.
          Length = 403

 Score =  122 bits (294), Expect = 3e-28
 Identities = 55/72 (76%), Positives = 62/72 (86%)
 Frame = +3

Query: 339 DVLKPLQEPIFLQTRSAQVIAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVP 518
           D L  + + IFLQT++AQV+AG+ V+ ALFITCQQIYQHLRWYTNP EQRWIVRILFIVP
Sbjct: 50  DPLLHVGDGIFLQTKTAQVLAGVCVWAALFITCQQIYQHLRWYTNPQEQRWIVRILFIVP 109

Query: 519 IYGCYSWISLLF 554
           IY  YSWISLLF
Sbjct: 110 IYATYSWISLLF 121


>AE014296-291|AAN11491.1|  403|Drosophila melanogaster CG12004-PB,
           isoform B protein.
          Length = 403

 Score =  122 bits (294), Expect = 3e-28
 Identities = 55/72 (76%), Positives = 62/72 (86%)
 Frame = +3

Query: 339 DVLKPLQEPIFLQTRSAQVIAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVP 518
           D L  + + IFLQT++AQV+AG+ V+ ALFITCQQIYQHLRWYTNP EQRWIVRILFIVP
Sbjct: 50  DPLLHVGDGIFLQTKTAQVLAGVCVWAALFITCQQIYQHLRWYTNPQEQRWIVRILFIVP 109

Query: 519 IYGCYSWISLLF 554
           IY  YSWISLLF
Sbjct: 110 IYATYSWISLLF 121


>AE014296-290|AAF47516.2|  403|Drosophila melanogaster CG12004-PA,
           isoform A protein.
          Length = 403

 Score =  122 bits (294), Expect = 3e-28
 Identities = 55/72 (76%), Positives = 62/72 (86%)
 Frame = +3

Query: 339 DVLKPLQEPIFLQTRSAQVIAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVP 518
           D L  + + IFLQT++AQV+AG+ V+ ALFITCQQIYQHLRWYTNP EQRWIVRILFIVP
Sbjct: 50  DPLLHVGDGIFLQTKTAQVLAGVCVWAALFITCQQIYQHLRWYTNPQEQRWIVRILFIVP 109

Query: 519 IYGCYSWISLLF 554
           IY  YSWISLLF
Sbjct: 110 IYATYSWISLLF 121


>AY051817-1|AAK93241.1|  491|Drosophila melanogaster LD32366p
           protein.
          Length = 491

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 23/54 (42%), Positives = 36/54 (66%)
 Frame = +3

Query: 393 VIAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIYGCYSWISLLF 554
           +I G+FV +A+ ++   I QH+  +T P  Q+ I+RIL++VPIY   +WI L F
Sbjct: 53  LIGGLFVLSAVPVSIWHIIQHVIHFTKPILQKHIIRILWMVPIYALNAWIGLFF 106


>AE014134-1743|AAF52840.2|  491|Drosophila melanogaster CG5850-PA,
           isoform A protein.
          Length = 491

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 23/54 (42%), Positives = 36/54 (66%)
 Frame = +3

Query: 393 VIAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIYGCYSWISLLF 554
           +I G+FV +A+ ++   I QH+  +T P  Q+ I+RIL++VPIY   +WI L F
Sbjct: 53  LIGGLFVLSAVPVSIWHIIQHVIHFTKPILQKHIIRILWMVPIYALNAWIGLFF 106


>AE014134-1742|ABI31304.1|  569|Drosophila melanogaster CG5850-PB,
           isoform B protein.
          Length = 569

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 23/54 (42%), Positives = 36/54 (66%)
 Frame = +3

Query: 393 VIAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIYGCYSWISLLF 554
           +I G+FV +A+ ++   I QH+  +T P  Q+ I+RIL++VPIY   +WI L F
Sbjct: 53  LIGGLFVLSAVPVSIWHIIQHVIHFTKPILQKHIIRILWMVPIYALNAWIGLFF 106


>AE014134-3008|AAF53733.1|  561|Drosophila melanogaster CG15170-PA
           protein.
          Length = 561

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = -3

Query: 529 QPYIGTINRIRTIQRCSDGFVYQRKCWYICWQVMNRAVNTNIPAM---TCALRVCRNMGS 359
           +PY+  + +  T   C+ G + Q+KC + C  V      TNI A+   TC+     +  S
Sbjct: 250 EPYVEQLEKCNTSDHCNAGCITQQKC-FTCNSVDQELCRTNITAIANSTCSSAEASSCFS 308

Query: 358 C 356
           C
Sbjct: 309 C 309


>BT023018-1|AAY55434.1|  281|Drosophila melanogaster IP08521p
           protein.
          Length = 281

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = -2

Query: 389 RAAGL-QEYGLLQRLQHVVNNFRNPLSGYIHRICGTHSENLIINCYHTVFLLLLNVTGNK 213
           R+ G+ Q+ G+ +R          P +GY+ R CG  S    I+ YHT       + GN 
Sbjct: 201 RSKGVGQDCGISRRCIGHAKEESKPATGYMKRTCGDLSTESKIHLYHTKSATYSKIRGNS 260

Query: 212 HCT 204
             T
Sbjct: 261 KTT 263


>AE014296-3749|AAN12212.1|  252|Drosophila melanogaster CG32461-PA
           protein.
          Length = 252

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = -2

Query: 389 RAAGL-QEYGLLQRLQHVVNNFRNPLSGYIHRICGTHSENLIINCYHTVFLLLLNVTGNK 213
           R+ G+ Q+ G+ +R          P +GY+ R CG  S    I+ YHT       + GN 
Sbjct: 170 RSKGVGQDCGISRRCIGHAKEESKPATGYMKRTCGDLSTESKIHLYHTKSATYSKIRGNS 229

Query: 212 HCT 204
             T
Sbjct: 230 KTT 232


>BT015990-1|AAV36875.1| 1449|Drosophila melanogaster RE54461p protein.
          Length = 1449

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +3

Query: 369  FLQTRSAQVIAGIFVFTALFITCQQIYQ-HLRWYTNPSEQR-WIVRILFIVPIYGCYSWI 542
            FL    +  + GI +   +FI+   +++ H  W  NP   R W    LF+V I+G   ++
Sbjct: 1327 FLYIARSSALLGI-ILHFVFISVTFVHRDHALWQRNPFTNRIWAFTCLFLVLIHGIICFV 1385

Query: 543  SLL 551
             LL
Sbjct: 1386 QLL 1388


>AY051455-1|AAK92879.1| 1126|Drosophila melanogaster GH12050p protein.
          Length = 1126

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +3

Query: 369  FLQTRSAQVIAGIFVFTALFITCQQIYQ-HLRWYTNPSEQR-WIVRILFIVPIYGCYSWI 542
            FL    +  + GI +   +FI+   +++ H  W  NP   R W    LF+V I+G   ++
Sbjct: 1004 FLYIARSSALLGI-ILHFVFISVTFVHRDHALWQRNPFTNRIWAFTCLFLVLIHGIICFV 1062

Query: 543  SLL 551
             LL
Sbjct: 1063 QLL 1065


>AE014134-732|AAN10345.1| 1126|Drosophila melanogaster CG3054-PB,
            isoform B protein.
          Length = 1126

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +3

Query: 369  FLQTRSAQVIAGIFVFTALFITCQQIYQ-HLRWYTNPSEQR-WIVRILFIVPIYGCYSWI 542
            FL    +  + GI +   +FI+   +++ H  W  NP   R W    LF+V I+G   ++
Sbjct: 1004 FLYIARSSALLGI-ILHFVFISVTFVHRDHALWQRNPFTNRIWAFTCLFLVLIHGIICFV 1062

Query: 543  SLL 551
             LL
Sbjct: 1063 QLL 1065


>AE014134-731|AAF51018.3| 1449|Drosophila melanogaster CG3054-PA,
            isoform A protein.
          Length = 1449

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +3

Query: 369  FLQTRSAQVIAGIFVFTALFITCQQIYQ-HLRWYTNPSEQR-WIVRILFIVPIYGCYSWI 542
            FL    +  + GI +   +FI+   +++ H  W  NP   R W    LF+V I+G   ++
Sbjct: 1327 FLYIARSSALLGI-ILHFVFISVTFVHRDHALWQRNPFTNRIWAFTCLFLVLIHGIICFV 1385

Query: 543  SLL 551
             LL
Sbjct: 1386 QLL 1388


>AY060780-1|AAL28328.1|  627|Drosophila melanogaster GH25012p
           protein.
          Length = 627

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
 Frame = -2

Query: 362 LLQRLQHVVNNFRNPLSGYIHRICGTHSENLIINCYHTVFLLLL----NVTGNKHCTHIA 195
           +L  ++++V    N +     RI  ++  +LI+     VFLLLL     V  N+    I 
Sbjct: 188 VLLGIKYLVAGLMNSVGMLSSRIEESNMADLIMGVCAIVFLLLLELLDRVANNEKRNKIL 247

Query: 194 HKFRRFSTHQRRTLFVLI 141
             F R+ +  R TL VLI
Sbjct: 248 RIFCRYLSTSRNTLIVLI 265


>AE014297-2068|AAF55215.2|  627|Drosophila melanogaster CG5404-PA
           protein.
          Length = 627

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
 Frame = -2

Query: 362 LLQRLQHVVNNFRNPLSGYIHRICGTHSENLIINCYHTVFLLLL----NVTGNKHCTHIA 195
           +L  ++++V    N +     RI  ++  +LI+     VFLLLL     V  N+    I 
Sbjct: 188 VLLGIKYLVAGLMNSVGMLSSRIEESNMADLIMGVCAIVFLLLLELLDRVANNEKRNKIL 247

Query: 194 HKFRRFSTHQRRTLFVLI 141
             F R+ +  R TL VLI
Sbjct: 248 RIFCRYLSTSRNTLIVLI 265


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,253,906
Number of Sequences: 53049
Number of extensions: 507137
Number of successful extensions: 1348
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1347
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)