Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8a01
         (266 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   0.75 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   1.7  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    20   4.0  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    20   4.0  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    20   4.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   4.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   5.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    19   7.0  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 0.75
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 114 STVTQCCRPLNFRSMLVQQRLCFLP 40
           ST    CR   FR+   +  +CF P
Sbjct: 383 STTANSCRSSTFRNNRDEYNVCFRP 407


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 255 HRIDKFIKNLNA 220
           HR+ K IK LNA
Sbjct: 220 HRLSKLIKQLNA 231


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
          5-like protein protein.
          Length = 162

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -1

Query: 62 SSGCASCRYSR*AETEH 12
          S GC +C Y    E+ H
Sbjct: 33 SQGCKACGYHSPLESNH 49


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 135 PTP*GDAKHHPFSTSLQ 185
           PTP GD++  P   SL+
Sbjct: 359 PTPNGDSRLPPLEISLK 375


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 135 PTP*GDAKHHPFSTSLQ 185
           PTP GD++  P   SL+
Sbjct: 359 PTPNGDSRLPPLEISLK 375


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 178 RSRIGPFLFY 207
           R R+ P+LFY
Sbjct: 115 RDRVNPYLFY 124


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.8 bits (39), Expect = 5.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 205 YLELKCI*IFNK 240
           YLE+KC  I+N+
Sbjct: 783 YLEIKCKRIYNE 794


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 19.4 bits (38), Expect = 7.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 252  RIDKFIKNLNAF*FQIKQ 199
            +I KF+  + AF  Q+KQ
Sbjct: 1182 KIVKFLDGIMAFDIQLKQ 1199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,727
Number of Sequences: 336
Number of extensions: 1244
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4378513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)