Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7p17
(619 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein L10a... 31 0.10
SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein L10... 30 0.23
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 30 0.31
SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb... 29 0.41
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.41
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 29 0.71
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 29 0.71
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 1.2
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 27 2.2
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.9
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.9
SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces po... 26 3.8
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 26 3.8
SPAC5H10.03 |||phosphoglycerate mutase family|Schizosaccharomyce... 26 5.0
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.0
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 6.6
SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 25 6.6
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 25 6.6
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 8.8
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 25 8.8
>SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 3|||Manual
Length = 216
Score = 31.5 bits (68), Expect = 0.10
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -2
Query: 519 IRLPSVPHPTPAASCILGIEDPLHRAPHG 433
I+LP+VP P A CILG L RA HG
Sbjct: 52 IKLPNVPRPNMAI-CILGDAHDLDRAKHG 79
>SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 216
Score = 30.3 bits (65), Expect = 0.23
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -2
Query: 519 IRLPSVPHPTPAASCILGIEDPLHRAPHG 433
I+LP+VP P + CILG L RA HG
Sbjct: 52 IKLPNVPRPNMSI-CILGDAHDLDRAKHG 79
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 29.9 bits (64), Expect = 0.31
Identities = 26/74 (35%), Positives = 34/74 (45%)
Frame = -1
Query: 619 SKNSSFKGSDVMMTLCPCVLTRITFPSSFEISFNPSAFGSPSNASCVLYLGYRGSASSSS 440
S +SS S + + T PSS + F+PSA S AS V Y+ S SSSS
Sbjct: 138 STSSSVINSPTGTAVSSQISTLSMSPSSTPV-FSPSASVSSKVASSVSYVSSEPSDSSSS 196
Query: 439 TRNVPSASADNLKA 398
T V ++ N A
Sbjct: 197 TNTVILTTSVNSPA 210
>SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 923
Score = 29.5 bits (63), Expect = 0.41
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Frame = +3
Query: 189 FVIIG-ISAVDKNKFKTCSQSGFCKR---LRPFKPEKSQYS--LNLDSILVHGNVLSAEV 350
F I G +++FKT Q GF +R L F+ E ++ L+SI + V+S
Sbjct: 17 FAIFGSCQGAFRHQFKTAEQDGFARRNRDLAKFQKENLNWNGLFQLNSISYNSGVVSG-- 74
Query: 351 VTIDAADEKRTVLWKYAFKLSALADGTFRVELDEADPL 464
+ E + F +S L + R ++DE L
Sbjct: 75 -VFEQQSENGENQHLFPFSISFLKNDVVRFQMDEKSRL 111
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 29.5 bits (63), Expect = 0.41
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = -1
Query: 553 ITFPSSFEISFNPSAFGSPSNASCVLYLGYRGSASSSSTRNVPSASADNLKAYFHKTVRF 374
IT SS S + S+ SPS++S + S+SSSS+ S+S+ + K+ +
Sbjct: 147 ITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSS 206
Query: 373 SSAAS 359
S+AS
Sbjct: 207 KSSAS 211
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 28.7 bits (61), Expect = 0.71
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 384 VLWKYAFKLSALADGTFRVELDEADPLYP 470
+ W YA KL L D + R E++E DP P
Sbjct: 937 LFWDYAKKLDFLIDVSDRFEVEERDPPSP 965
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 28.7 bits (61), Expect = 0.71
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -1
Query: 589 VMMTLCPCVLTRITFPSSFEISFNPSAFGSPSNAS-C-VLYLGYRGSASS 446
+ +T+ P L R PS+ + F P GSP N C +L+L + SS
Sbjct: 1984 IFVTMNPGYLGRFKLPSNLKKLFRPIWMGSPDNKKICEILFLSFGFKESS 2033
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.9 bits (59), Expect = 1.2
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = -1
Query: 565 VLTRITFPSSFEISFNPSAFGSPSNASCVLYLGYRGSASSSSTRNVPSASADNLKAYFHK 386
VL SS + + S+ SPS++S S+SSSS+ + S+S+ + +
Sbjct: 122 VLQTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSS 181
Query: 385 TVRFSSAASMVTTSA 341
+ SS++S ++S+
Sbjct: 182 SSSSSSSSSSSSSSS 196
Score = 27.1 bits (57), Expect = 2.2
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = -1
Query: 541 SSFEISFNPSAFGSPSNASCVLYLGYRGSASSSSTRNVPSASADNLKAYFHKTVRFSSAA 362
SS + +PS+ S S++S S+SSSS+ + S+S+ + + + SS++
Sbjct: 147 SSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 206
Query: 361 SMVTTSA 341
S+ TS+
Sbjct: 207 SVPITSS 213
Score = 26.6 bits (56), Expect = 2.9
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = -1
Query: 559 TRITFPSSFEISFNPSAFGSPSNASCVLYLGYRGSASSSSTRNVPSASADNLKAYFHKTV 380
T T PSS S + S+ S S++S S+SSSS+ + S+S+ + +
Sbjct: 150 TTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVP 209
Query: 379 RFSSAASMVTTSA 341
SS +S ++S+
Sbjct: 210 ITSSTSSSHSSSS 222
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 27.1 bits (57), Expect = 2.2
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = -1
Query: 529 ISFNPSAFG--SPSNASCVL--YLGYRGSASSSSTRNVPSASADNLKAYFHKTVRFSSAA 362
I NPS F SP + S + Y GY+ A+S + +PS++ N TV +A
Sbjct: 278 IPVNPSTFSASSPPSGSMLASPYNGYQNDAASFAHSKLPSSANPNTPFNSTATVDVGAAG 337
Query: 361 S 359
S
Sbjct: 338 S 338
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 26.6 bits (56), Expect = 2.9
Identities = 26/93 (27%), Positives = 46/93 (49%)
Frame = -1
Query: 619 SKNSSFKGSDVMMTLCPCVLTRITFPSSFEISFNPSAFGSPSNASCVLYLGYRGSASSSS 440
S+ F+GSD TL ++ + SS S S+ +PS++S S+SSSS
Sbjct: 112 SEQFDFEGSD--STLAASTISGGIY-SSTSASSTSSSTATPSSSSTT-----SSSSSSSS 163
Query: 439 TRNVPSASADNLKAYFHKTVRFSSAASMVTTSA 341
+ + S+ ++ + +V SSA+S + S+
Sbjct: 164 STPISSSITSSISSSASSSVSSSSASSSGSISS 196
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 2.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 451 SSSSTRNVPSASADNLKAYFHKTVRFSSAASMVTTS 344
SSSS+R + ++S + FH S+ +S TTS
Sbjct: 797 SSSSSRTISTSSTNEYNTSFHAPTVSSTTSSSSTTS 832
>SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 507
Score = 26.2 bits (55), Expect = 3.8
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 445 SSTRNVPSASADNLKAYFHKTVRFSSAASMV-TTSADRTL 329
SS ++ SAS DNL A T +S AS V T SA T+
Sbjct: 167 SSLASLSSASTDNLAASVTPTTVAASVASSVDTDSASATI 206
>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 463
Score = 26.2 bits (55), Expect = 3.8
Identities = 27/117 (23%), Positives = 44/117 (37%)
Frame = -1
Query: 505 GSPSNASCVLYLGYRGSASSSSTRNVPSASADNLKAYFHKTVRFSSAASMVTTSADRTLP 326
G+PS + SSSST N ++S N + T+ + A+++ +T A
Sbjct: 153 GNPSCVGIAVLAVLPQPISSSSTYNSTTSSYHNSTSTPPPTITSTKASTVTSTEATTVTT 212
Query: 325 *TKILSKFKLY*DFSGLKGRSLLQKPD*LHVLNLFLSTAEMPIITNAATRTKAQTFI 155
T + + G S + V + ST N AT TK T++
Sbjct: 213 TTAVTVTATETYTVTATNGGSTITSTGASTVTSTQPSTVTSTQRKNTATTTKTTTYV 269
>SPAC5H10.03 |||phosphoglycerate mutase family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 219
Score = 25.8 bits (54), Expect = 5.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 438 VELDEADPLYPRYRTQLALDG 500
+ELD+ + LYP+Y Q DG
Sbjct: 107 LELDKLNKLYPKYNFQSCQDG 127
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 5.0
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = -1
Query: 550 TFPSSFEISFNPSAFGSPSNASCVLYLGYRGSASSSSTRNVPSASADNLKAYFHKTVRFS 371
+F S+ S + S+F S ++S S+SSSS+R S+S+ + HK+ S
Sbjct: 354 SFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPA-SSSSHSSSLSSHKSSSSS 412
Query: 370 SAASMVTTSA 341
++S +SA
Sbjct: 413 KSSSAPVSSA 422
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 25.4 bits (53), Expect = 6.6
Identities = 21/83 (25%), Positives = 33/83 (39%)
Frame = -1
Query: 619 SKNSSFKGSDVMMTLCPCVLTRITFPSSFEISFNPSAFGSPSNASCVLYLGYRGSASSSS 440
SK S + S +L C + R + N S F S + + S SS
Sbjct: 597 SKASYNQDSSPNASLEQCFVQRSPSKMLTTLRNNSSTFPSLRKNAMIARKSTADSLSSPK 656
Query: 439 TRNVPSASADNLKAYFHKTVRFS 371
++VPS +L HK++ +S
Sbjct: 657 RQSVPSTPKASLSPRVHKSMTYS 679
>SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 468
Score = 25.4 bits (53), Expect = 6.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 469 QDTGRSWRWMGNRRQTD 519
QD+GR W W G ++D
Sbjct: 218 QDSGREWFWDGENAESD 234
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = -2
Query: 171 RPRPSSWVFIAILCRHKPITKCPSGIFNNTSQLDTL*GIIF 49
R +++F++++C + I P G+F+ L IF
Sbjct: 415 RANYDNYIFLSLICETRAIIVSPEGVFSANHDLSCEESTIF 455
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.0 bits (52), Expect = 8.8
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = -1
Query: 595 SDVMMTLCPCVLTRITFPSSF-EISFNPSAFGSPSNASCVLYLGYRGSASSSSTRNVPSA 419
S +T + +T SS S N + SP+++S S +SSST + A
Sbjct: 71 SSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLA 130
Query: 418 SAD-NLKAYFHKTVRFSSAASMVTTSA 341
S+ + ++ SS AS TTS+
Sbjct: 131 SSSITSSSLASSSITSSSLASSSTTSS 157
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 25.0 bits (52), Expect = 8.8
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 207 SAVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVHGNVLSAE 347
S D KF+T + SG + P K ++ D+IL V S +
Sbjct: 42 SLKDLKKFETLNVSGKVPHVLPLKSHADPFAHIADAILAEEEVASTQ 88
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,700,456
Number of Sequences: 5004
Number of extensions: 58829
Number of successful extensions: 171
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 271646730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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