Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7p07
(623 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68318-1|CAA92691.1| 285|Caenorhabditis elegans Hypothetical pr... 75 4e-14
U23519-12|AAK31505.3| 1021|Caenorhabditis elegans Hypothetical p... 32 0.38
Z92832-6|CAB07375.2| 572|Caenorhabditis elegans Hypothetical pr... 31 0.51
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 29 2.7
AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical ... 29 2.7
U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated p... 29 3.6
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 29 3.6
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 29 3.6
AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine nucle... 29 3.6
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 29 3.6
U80843-6|AAB37971.1| 345|Caenorhabditis elegans Skn-1 dependent... 27 8.2
>Z68318-1|CAA92691.1| 285|Caenorhabditis elegans Hypothetical
protein T21B10.1 protein.
Length = 285
Score = 74.9 bits (176), Expect = 4e-14
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 14/190 (7%)
Frame = +2
Query: 86 EMLRNVLSPLR-RGSFQVTSIRQAQKKYPK-VDKKVQAAAESLAARGFLRPTKSWDPPTN 259
E LR L +R R S QVT+ + ++ + + +++ ARGFL+ T+++ P +
Sbjct: 38 ESLRKTLPSIRARESTQVTASADSVTEFDDDLLTMSRIDTDAIRARGFLKYTQNYVPGVD 97
Query: 260 INETILKICATCGLNGNSEFEALD----------TKFTVLKACYEETGHSVPNSLLHTIE 409
+ +L+ ++C + + E +D KF +L + H N L +E
Sbjct: 98 VKNQVLEAASSCLRSAGVKSENVDQYKFVEGDNSVKFELLNRLGKSIEHWPTNGKLLHLE 157
Query: 410 TVDDLTEFYKTPVYTTTPF-DALKLMDLPKNLHVQKDYVRFHP-DTDTLFNGVSAFPKSS 583
TV D+ EFY+TPV T + + + + PKN+ + + RFHP DT G++AFP S
Sbjct: 158 TVADVVEFYQTPVKNVTKYTEMARDENKPKNVSIMEHAARFHPEDTHMYHGGITAFPGSG 217
Query: 584 TIVTGLKARK 613
V L+ ++
Sbjct: 218 GEVLSLRQKR 227
>U23519-12|AAK31505.3| 1021|Caenorhabditis elegans Hypothetical
protein F26G1.1 protein.
Length = 1021
Score = 31.9 bits (69), Expect = 0.38
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 281 ICATCGLNGNSEFEALDTKFTVLKACYEETGHSVPNSLLHTIETVDDLTEF 433
+C++ L F LD ++ C E+ G NSL+H IET+ + T+F
Sbjct: 715 VCSSLSLIDFQAFTNLDQCIELIVRCREDMGLR-QNSLIHIIETLFNFTQF 764
>Z92832-6|CAB07375.2| 572|Caenorhabditis elegans Hypothetical
protein F31D4.7 protein.
Length = 572
Score = 31.5 bits (68), Expect = 0.51
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 230 PTKSWDPPTNI--NETILKICATCGLNGNSEFEALDT 334
PTKS D TN+ ET L++C G N N EF ++
Sbjct: 513 PTKSPDEVTNLVEYETALRVCEQIGDNNNEEFSEAES 549
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +2
Query: 413 VDDLTEFYKTPVYTTT---PFDALKLMDLPKNLHVQKDYVRFHPDTDTLFNGVSAFPKSS 583
V++ E K+P +T+ P A + D PK +V ++Y R D T+ + F K +
Sbjct: 259 VEEYEETTKSPTVSTSTSEPMAAAPITDAPKTENVSRNYTRIIWDRRTVRSSSEKFSKFA 318
Query: 584 TI 589
I
Sbjct: 319 II 320
>AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2b protein.
Length = 634
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +2
Query: 413 VDDLTEFYKTPVYTTT---PFDALKLMDLPKNLHVQKDYVRFHPDTDTLFNGVSAFPKSS 583
V++ E K+P +T+ P A + D PK +V ++Y R D T+ + F K +
Sbjct: 209 VEEYEETTKSPTVSTSTSEPMAAAPITDAPKTENVSRNYTRIIWDRRTVRSSSEKFSKFA 268
Query: 584 TI 589
I
Sbjct: 269 II 270
>U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated
protein 73, isoform b protein.
Length = 1638
Score = 28.7 bits (61), Expect = 3.6
Identities = 32/161 (19%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Frame = +2
Query: 74 KKN*EMLRNVLSPLRRGSFQVTSIRQAQKKYPKVDKKVQAAAESLAARGFLRPTKSWDPP 253
K N + +RN ++ +++ + +++ +QK DK+ + E++
Sbjct: 760 KDNQQQVRNAIADIQKSAKELSQALYSQKLTDLRDKRDRVVLEAIREHVRELEIAESRVM 819
Query: 254 TNINETILKICATCGLN-----GNSEFEALDTKFTVLKACYEETGHSVPNSLLHTIETVD 418
T NET +++ A + NS + +D + + L + G +PN T++ +
Sbjct: 820 TYANETSMRMQAASEVGDLRRISNSVCKLIDNQLSAL----TQLG-VIPNDYNDTVQKQE 874
Query: 419 DLTEFYKTPVY-TTTPFDA--LKLMDLPKNLHVQKDYVRFH 532
+L F + P+DA ++ +L +N +D V +H
Sbjct: 875 ELRAFRDAVQHKLKEPYDAFVIRFRELMENRLANRDEVVYH 915
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 28.7 bits (61), Expect = 3.6
Identities = 32/161 (19%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Frame = +2
Query: 74 KKN*EMLRNVLSPLRRGSFQVTSIRQAQKKYPKVDKKVQAAAESLAARGFLRPTKSWDPP 253
K N + +RN ++ +++ + +++ +QK DK+ + E++
Sbjct: 760 KDNQQQVRNAIADIQKSAKELSQALYSQKLTDLRDKRDRVVLEAIREHVRELEIAESRVM 819
Query: 254 TNINETILKICATCGLN-----GNSEFEALDTKFTVLKACYEETGHSVPNSLLHTIETVD 418
T NET +++ A + NS + +D + + L + G +PN T++ +
Sbjct: 820 TYANETSMRMQAASEVGDLRRISNSVCKLIDNQLSAL----TQLG-VIPNDYNDTVQKQE 874
Query: 419 DLTEFYKTPVY-TTTPFDA--LKLMDLPKNLHVQKDYVRFH 532
+L F + P+DA ++ +L +N +D V +H
Sbjct: 875 ELRAFRDAVQHKLKEPYDAFVIRFRELMENRLANRDEVVYH 915
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 28.7 bits (61), Expect = 3.6
Identities = 32/161 (19%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Frame = +2
Query: 74 KKN*EMLRNVLSPLRRGSFQVTSIRQAQKKYPKVDKKVQAAAESLAARGFLRPTKSWDPP 253
K N + +RN ++ +++ + +++ +QK DK+ + E++
Sbjct: 760 KDNQQQVRNAIADIQKSAKELSQALYSQKLTDLRDKRDRVVLEAIREHVRELEIAESRVM 819
Query: 254 TNINETILKICATCGLN-----GNSEFEALDTKFTVLKACYEETGHSVPNSLLHTIETVD 418
T NET +++ A + NS + +D + + L + G +PN T++ +
Sbjct: 820 TYANETSMRMQAASEVGDLRRISNSVCKLIDNQLSAL----TQLG-VIPNDYNDTVQKQE 874
Query: 419 DLTEFYKTPVY-TTTPFDA--LKLMDLPKNLHVQKDYVRFH 532
+L F + P+DA ++ +L +N +D V +H
Sbjct: 875 ELRAFRDAVQHKLKEPYDAFVIRFRELMENRLANRDEVVYH 915
>AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73B protein.
Length = 1638
Score = 28.7 bits (61), Expect = 3.6
Identities = 32/161 (19%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Frame = +2
Query: 74 KKN*EMLRNVLSPLRRGSFQVTSIRQAQKKYPKVDKKVQAAAESLAARGFLRPTKSWDPP 253
K N + +RN ++ +++ + +++ +QK DK+ + E++
Sbjct: 760 KDNQQQVRNAIADIQKSAKELSQALYSQKLTDLRDKRDRVVLEAIREHVRELEIAESRVM 819
Query: 254 TNINETILKICATCGLN-----GNSEFEALDTKFTVLKACYEETGHSVPNSLLHTIETVD 418
T NET +++ A + NS + +D + + L + G +PN T++ +
Sbjct: 820 TYANETSMRMQAASEVGDLRRISNSVCKLIDNQLSAL----TQLG-VIPNDYNDTVQKQE 874
Query: 419 DLTEFYKTPVY-TTTPFDA--LKLMDLPKNLHVQKDYVRFH 532
+L F + P+DA ++ +L +N +D V +H
Sbjct: 875 ELRAFRDAVQHKLKEPYDAFVIRFRELMENRLANRDEVVYH 915
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 28.7 bits (61), Expect = 3.6
Identities = 32/161 (19%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Frame = +2
Query: 74 KKN*EMLRNVLSPLRRGSFQVTSIRQAQKKYPKVDKKVQAAAESLAARGFLRPTKSWDPP 253
K N + +RN ++ +++ + +++ +QK DK+ + E++
Sbjct: 760 KDNQQQVRNAIADIQKSAKELSQALYSQKLTDLRDKRDRVVLEAIREHVRELEIAESRVM 819
Query: 254 TNINETILKICATCGLN-----GNSEFEALDTKFTVLKACYEETGHSVPNSLLHTIETVD 418
T NET +++ A + NS + +D + + L + G +PN T++ +
Sbjct: 820 TYANETSMRMQAASEVGDLRRISNSVCKLIDNQLSAL----TQLG-VIPNDYNDTVQKQE 874
Query: 419 DLTEFYKTPVY-TTTPFDA--LKLMDLPKNLHVQKDYVRFH 532
+L F + P+DA ++ +L +N +D V +H
Sbjct: 875 ELRAFRDAVQHKLKEPYDAFVIRFRELMENRLANRDEVVYH 915
>U80843-6|AAB37971.1| 345|Caenorhabditis elegans Skn-1 dependent
zygotic transcriptprotein 4 protein.
Length = 345
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 329 DTKFTVLKACYEETGHSVPNSLLHTIETVDDL 424
D T+ K Y+ T H+ N LH I+ D+L
Sbjct: 52 DHSITINKDTYQFTVHNTKNGFLHDIDERDEL 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,684,525
Number of Sequences: 27780
Number of extensions: 319146
Number of successful extensions: 833
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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