Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7p05
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132876-15|CAD21668.2| 722|Caenorhabditis elegans Hypothetical... 231 5e-61
AB096636-1|BAC76736.1| 722|Caenorhabditis elegans tyrosyl-tRNA ... 231 5e-61
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 29 2.3
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 29 2.3
U23510-6|AAC46784.2| 236|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z82052-7|CAD89750.1| 294|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 28 7.0
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 28 7.0
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z92789-6|CAB07218.2| 303|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z48717-5|CAA88610.1| 519|Caenorhabditis elegans Hypothetical pr... 27 9.2
>AL132876-15|CAD21668.2| 722|Caenorhabditis elegans Hypothetical
protein Y105E8A.19 protein.
Length = 722
Score = 231 bits (564), Expect = 5e-61
Identities = 116/169 (68%), Positives = 135/169 (79%), Gaps = 2/169 (1%)
Frame = +1
Query: 175 QEKKHLITRNLQEVLGDDKLTEILKQ--RDLKIYWGTATTGRPHVAYFVPMLKIADFLKA 348
+E + LI RNLQE LG DKLT+ L+ + +YWGTATTG+PHV Y VPM KIADFL+A
Sbjct: 17 KETRELILRNLQESLGVDKLTKQLETPGKVPHVYWGTATTGKPHVGYLVPMRKIADFLQA 76
Query: 349 GCEVTILFADLHAYLDNMKAPWELLALRTQYYEAAIKAMLTSIGVPLEKLKFVRGTEYQL 528
G +VTILFADLHAYLDNMK+ WELL R YYE IKA+L S+ VP+E+L F +GTEYQL
Sbjct: 77 GLKVTILFADLHAYLDNMKSSWELLKCRVIYYENVIKALLQSLDVPIEQLYFKKGTEYQL 136
Query: 529 SKEYTLDVYRLSSVVTEHDAKKAGAEVVKQVEHPLLSGLLYPNLQALDE 675
S+EYT DV RLS+ V++ DA KAGAEVVKQVE PLLSGLLYP LQALDE
Sbjct: 137 SREYTDDVLRLSAQVSQRDALKAGAEVVKQVESPLLSGLLYPLLQALDE 185
Score = 61.3 bits (142), Expect = 6e-10
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Frame = +1
Query: 223 DDKLTEILKQRDLKIYWGTATTGRPHVAYFVPMLKIADFLKAG---CEVTILFADLHAYL 393
D L ++ Q+ L + + GR H+ + P+LKI + AG TIL + L A+L
Sbjct: 392 DRVLADVSPQKPLHLMFIAPGKGRFHLGFIAPLLKIKEISDAGGVPVIATILVSPLEAFL 451
Query: 394 DNMKAPWELLALRTQYYEAAIKAMLTSIGVP-LEKLKFVRGTEYQLSKEYTLDVYRLSSV 570
DN K W + R Y+ +++ + + L K++ + L +EY LD Y+++S
Sbjct: 452 DNEKVAWAAIQSRAVYFREMFISLIKHLKLDGLVKVEIAGEHDKYLDREYVLDFYKMASA 511
Query: 571 VTEHDA 588
V+ ++
Sbjct: 512 VSRDES 517
>AB096636-1|BAC76736.1| 722|Caenorhabditis elegans tyrosyl-tRNA
synthetase (cytoplasmic)protein.
Length = 722
Score = 231 bits (564), Expect = 5e-61
Identities = 116/169 (68%), Positives = 135/169 (79%), Gaps = 2/169 (1%)
Frame = +1
Query: 175 QEKKHLITRNLQEVLGDDKLTEILKQ--RDLKIYWGTATTGRPHVAYFVPMLKIADFLKA 348
+E + LI RNLQE LG DKLT+ L+ + +YWGTATTG+PHV Y VPM KIADFL+A
Sbjct: 17 KETRELILRNLQESLGVDKLTKQLETPGKVPHVYWGTATTGKPHVGYLVPMRKIADFLQA 76
Query: 349 GCEVTILFADLHAYLDNMKAPWELLALRTQYYEAAIKAMLTSIGVPLEKLKFVRGTEYQL 528
G +VTILFADLHAYLDNMK+ WELL R YYE IKA+L S+ VP+E+L F +GTEYQL
Sbjct: 77 GLKVTILFADLHAYLDNMKSSWELLKCRVIYYENVIKALLQSLDVPIEQLYFKKGTEYQL 136
Query: 529 SKEYTLDVYRLSSVVTEHDAKKAGAEVVKQVEHPLLSGLLYPNLQALDE 675
S+EYT DV RLS+ V++ DA KAGAEVVKQVE PLLSGLLYP LQALDE
Sbjct: 137 SREYTDDVLRLSAQVSQRDALKAGAEVVKQVESPLLSGLLYPLLQALDE 185
Score = 61.3 bits (142), Expect = 6e-10
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Frame = +1
Query: 223 DDKLTEILKQRDLKIYWGTATTGRPHVAYFVPMLKIADFLKAG---CEVTILFADLHAYL 393
D L ++ Q+ L + + GR H+ + P+LKI + AG TIL + L A+L
Sbjct: 392 DRVLADVSPQKPLHLMFIAPGKGRFHLGFIAPLLKIKEISDAGGVPVIATILVSPLEAFL 451
Query: 394 DNMKAPWELLALRTQYYEAAIKAMLTSIGVP-LEKLKFVRGTEYQLSKEYTLDVYRLSSV 570
DN K W + R Y+ +++ + + L K++ + L +EY LD Y+++S
Sbjct: 452 DNEKVAWAAIQSRAVYFREMFISLIKHLKLDGLVKVEIAGEHDKYLDREYVLDFYKMASA 511
Query: 571 VTEHDA 588
V+ ++
Sbjct: 512 VSRDES 517
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -3
Query: 266 IFKSLC-FKISVSLSSPKTSCKFRVIKCFFSC 174
IF SLC F I V+ + P+TS +I+ +FSC
Sbjct: 267 IFMSLCVFMIMVAEAMPQTSDALPLIQIYFSC 298
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -3
Query: 266 IFKSLC-FKISVSLSSPKTSCKFRVIKCFFSC 174
IF SLC F I V+ + P+TS +I+ +FSC
Sbjct: 267 IFMSLCVFMIMVAEAMPQTSDALPLIQIYFSC 298
>U23510-6|AAC46784.2| 236|Caenorhabditis elegans Hypothetical
protein R12C12.5 protein.
Length = 236
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/74 (22%), Positives = 37/74 (50%)
Frame = +1
Query: 391 LDNMKAPWELLALRTQYYEAAIKAMLTSIGVPLEKLKFVRGTEYQLSKEYTLDVYRLSSV 570
+ N++ ELL + +Y+E I+ + S ++ K + + K Y ++ R+ V
Sbjct: 40 IGNLRDAEELLIKKQEYFELRIEQEVESAKKYMKTNKKMALAALRKKKHYEQELSRIDGV 99
Query: 571 VTEHDAKKAGAEVV 612
+T+ +A++ E V
Sbjct: 100 LTKLEAQRTALENV 113
>Z82052-7|CAD89750.1| 294|Caenorhabditis elegans Hypothetical
protein T25E12.12 protein.
Length = 294
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -3
Query: 290 PVVAVPQYIFKSLCFKIS-VSLSSPKTSCKFRVIKCFFSCQVAMVNLWRS 144
P++ +P I K + K++ + L+ K S F V+ CQ+ + LW S
Sbjct: 12 PILKLPVEIIKQILEKLNPIELAIRKVSRSFEVLLDKLPCQIRKLVLWVS 61
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.9 bits (59), Expect = 7.0
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Frame = +1
Query: 148 LHKLTMATWQEKKHLITRNLQEVLGDDKLTEILKQRDLKIYWGTATTGR-----PHVAYF 312
L T W++ + R + L DK + + ++Y+ T+ + P +Y
Sbjct: 189 LESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRVYYPTSGEQKHPQCHPSTSYA 248
Query: 313 VPMLKIADFLKAGCEVTILFADLHA 387
+P LK LKA C V + D H+
Sbjct: 249 IPKLKGDHLLKASCSVHVPHLDRHS 273
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.9 bits (59), Expect = 7.0
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Frame = +1
Query: 148 LHKLTMATWQEKKHLITRNLQEVLGDDKLTEILKQRDLKIYWGTATTGR-----PHVAYF 312
L T W++ + R + L DK + + ++Y+ T+ + P +Y
Sbjct: 204 LESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRVYYPTSGEQKHPQCHPSTSYA 263
Query: 313 VPMLKIADFLKAGCEVTILFADLHA 387
+P LK LKA C V + D H+
Sbjct: 264 IPKLKGDHLLKASCSVHVPHLDRHS 288
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 27.9 bits (59), Expect = 7.0
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Frame = +1
Query: 148 LHKLTMATWQEKKHLITRNLQEVLGDDKLTEILKQRDLKIYWGTATTGR-----PHVAYF 312
L T W++ + R + L DK + + ++Y+ T+ + P +Y
Sbjct: 204 LESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRVYYPTSGEQKHPQCHPSTSYA 263
Query: 313 VPMLKIADFLKAGCEVTILFADLHA 387
+P LK LKA C V + D H+
Sbjct: 264 IPKLKGDHLLKASCSVHVPHLDRHS 288
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.9 bits (59), Expect = 7.0
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Frame = +1
Query: 148 LHKLTMATWQEKKHLITRNLQEVLGDDKLTEILKQRDLKIYWGTATTGR-----PHVAYF 312
L T W++ + R + L DK + + ++Y+ T+ + P +Y
Sbjct: 189 LESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRVYYPTSGEQKHPQCHPSTSYA 248
Query: 313 VPMLKIADFLKAGCEVTILFADLHA 387
+P LK LKA C V + D H+
Sbjct: 249 IPKLKGDHLLKASCSVHVPHLDRHS 273
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.9 bits (59), Expect = 7.0
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Frame = +1
Query: 148 LHKLTMATWQEKKHLITRNLQEVLGDDKLTEILKQRDLKIYWGTATTGR-----PHVAYF 312
L T W++ + R + L DK + + ++Y+ T+ + P +Y
Sbjct: 204 LESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRVYYPTSGEQKHPQCHPSTSYA 263
Query: 313 VPMLKIADFLKAGCEVTILFADLHA 387
+P LK LKA C V + D H+
Sbjct: 264 IPKLKGDHLLKASCSVHVPHLDRHS 288
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 27.9 bits (59), Expect = 7.0
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Frame = +1
Query: 148 LHKLTMATWQEKKHLITRNLQEVLGDDKLTEILKQRDLKIYWGTATTGR-----PHVAYF 312
L T W++ + R + L DK + + ++Y+ T+ + P +Y
Sbjct: 204 LESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRVYYPTSGEQKHPQCHPSTSYA 263
Query: 313 VPMLKIADFLKAGCEVTILFADLHA 387
+P LK LKA C V + D H+
Sbjct: 264 IPKLKGDHLLKASCSVHVPHLDRHS 288
>Z92789-6|CAB07218.2| 303|Caenorhabditis elegans Hypothetical
protein H02I12.4 protein.
Length = 303
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 358 PHSQPSRNQLSSTLEQNRPHEVFQ**LYPNIFLNLS 251
PH QP+ +S+ + QN VF+ L PN+ N++
Sbjct: 31 PHEQPATVNISTDV-QNEESNVFEVILKPNVVFNVT 65
>Z48717-5|CAA88610.1| 519|Caenorhabditis elegans Hypothetical
protein T10B9.8 protein.
Length = 519
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 47 IVSICMQLVLKINIKIYNFKITYIIQLDAINRRI 148
+V I Q++LK N+K+ +F+ I LDAI+ RI
Sbjct: 227 LVEIIRQILLK-NLKVGSFRKINEITLDAIHNRI 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,854,148
Number of Sequences: 27780
Number of extensions: 281803
Number of successful extensions: 808
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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