Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7o23
(682 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U57877-1|AAB41838.1| 169|Homo sapiens integral membrane protein... 95 2e-19
D49737-1|BAA31998.1| 169|Homo sapiens cytochrome b large subuni... 95 2e-19
CR457102-1|CAG33383.1| 169|Homo sapiens SDHC protein. 95 2e-19
BC066329-1|AAH66329.1| 169|Homo sapiens succinate dehydrogenase... 95 2e-19
BC033626-1|AAH33626.1| 169|Homo sapiens succinate dehydrogenase... 95 2e-19
BC020808-1|AAH20808.1| 169|Homo sapiens succinate dehydrogenase... 95 2e-19
AL592295-2|CAH70271.1| 169|Homo sapiens succinate dehydrogenase... 95 2e-19
AF039594-1|AAC27993.1| 169|Homo sapiens succinate dehydrogenase... 95 2e-19
AF081495-1|AAC31940.1| 135|Homo sapiens integral membrane prote... 76 1e-13
AB211234-1|BAE46978.1| 135|Homo sapiens succinate dehydrogenase... 76 1e-13
AB201252-1|BAE46977.1| 116|Homo sapiens succinate dehydrogenase... 71 4e-12
AB211235-1|BAE46979.1| 150|Homo sapiens succinate dehydrogenase... 47 5e-05
X68641-1|CAA48605.1| 175|Homo sapiens HIP protein. 25 9.3
S51768-1|AAB24642.1| 175|Homo sapiens PAP-H protein. 25 9.3
L15533-1|AAA60020.1| 175|Homo sapiens pancreatitis-associated p... 25 9.3
D13510-1|BAA02728.1| 175|Homo sapiens PAP homologous protein pr... 25 9.3
BC036776-1|AAH36776.1| 175|Homo sapiens regenerating islet-deri... 25 9.3
AY544130-1|AAT11161.1| 175|Homo sapiens proliferation-inducing ... 25 9.3
AY544128-1|AAT11159.1| 175|Homo sapiens proliferation-inducing ... 25 9.3
AC069387-2|AAX93047.1| 175|Homo sapiens unknown protein. 25 9.3
M84337-1|AAA36415.1| 174|Homo sapiens pancreatitis associated p... 25 9.3
>U57877-1|AAB41838.1| 169|Homo sapiens integral membrane protein
CII-3 protein.
Length = 169
Score = 95.5 bits (227), Expect = 2e-19
Identities = 44/98 (44%), Positives = 59/98 (60%)
Frame = +2
Query: 314 RNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMI 493
+N NRPLSPH+TIYS+ L +SI HR TG+ L+ S G+ AL+ + Y+ ++
Sbjct: 44 KNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELV 103
Query: 494 EGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAK 607
+ L L PA + AK + PL YH NGIRHL WD K
Sbjct: 104 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGK 141
>D49737-1|BAA31998.1| 169|Homo sapiens cytochrome b large subunit
of complex II protein.
Length = 169
Score = 95.5 bits (227), Expect = 2e-19
Identities = 44/98 (44%), Positives = 59/98 (60%)
Frame = +2
Query: 314 RNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMI 493
+N NRPLSPH+TIYS+ L +SI HR TG+ L+ S G+ AL+ + Y+ ++
Sbjct: 44 KNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELV 103
Query: 494 EGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAK 607
+ L L PA + AK + PL YH NGIRHL WD K
Sbjct: 104 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGK 141
>CR457102-1|CAG33383.1| 169|Homo sapiens SDHC protein.
Length = 169
Score = 95.5 bits (227), Expect = 2e-19
Identities = 44/98 (44%), Positives = 59/98 (60%)
Frame = +2
Query: 314 RNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMI 493
+N NRPLSPH+TIYS+ L +SI HR TG+ L+ S G+ AL+ + Y+ ++
Sbjct: 44 KNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELV 103
Query: 494 EGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAK 607
+ L L PA + AK + PL YH NGIRHL WD K
Sbjct: 104 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGK 141
>BC066329-1|AAH66329.1| 169|Homo sapiens succinate dehydrogenase
complex, subunit C, integral membrane protein, 15kDa
protein.
Length = 169
Score = 95.5 bits (227), Expect = 2e-19
Identities = 44/98 (44%), Positives = 59/98 (60%)
Frame = +2
Query: 314 RNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMI 493
+N NRPLSPH+TIYS+ L +SI HR TG+ L+ S G+ AL+ + Y+ ++
Sbjct: 44 KNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELV 103
Query: 494 EGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAK 607
+ L L PA + AK + PL YH NGIRHL WD K
Sbjct: 104 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGK 141
>BC033626-1|AAH33626.1| 169|Homo sapiens succinate dehydrogenase
complex, subunit C, integral membrane protein, 15kDa
protein.
Length = 169
Score = 95.5 bits (227), Expect = 2e-19
Identities = 44/98 (44%), Positives = 59/98 (60%)
Frame = +2
Query: 314 RNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMI 493
+N NRPLSPH+TIYS+ L +SI HR TG+ L+ S G+ AL+ + Y+ ++
Sbjct: 44 KNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELV 103
Query: 494 EGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAK 607
+ L L PA + AK + PL YH NGIRHL WD K
Sbjct: 104 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGK 141
>BC020808-1|AAH20808.1| 169|Homo sapiens succinate dehydrogenase
complex, subunit C, integral membrane protein, 15kDa
protein.
Length = 169
Score = 95.5 bits (227), Expect = 2e-19
Identities = 44/98 (44%), Positives = 59/98 (60%)
Frame = +2
Query: 314 RNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMI 493
+N NRPLSPH+TIYS+ L +SI HR TG+ L+ S G+ AL+ + Y+ ++
Sbjct: 44 KNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELV 103
Query: 494 EGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAK 607
+ L L PA + AK + PL YH NGIRHL WD K
Sbjct: 104 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGK 141
>AL592295-2|CAH70271.1| 169|Homo sapiens succinate dehydrogenase
complex, subunit C, integral membrane protein, 15kDa
protein.
Length = 169
Score = 95.5 bits (227), Expect = 2e-19
Identities = 44/98 (44%), Positives = 59/98 (60%)
Frame = +2
Query: 314 RNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMI 493
+N NRPLSPH+TIYS+ L +SI HR TG+ L+ S G+ AL+ + Y+ ++
Sbjct: 44 KNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELV 103
Query: 494 EGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAK 607
+ L L PA + AK + PL YH NGIRHL WD K
Sbjct: 104 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGK 141
>AF039594-1|AAC27993.1| 169|Homo sapiens succinate dehydrogenase
subunit C protein.
Length = 169
Score = 95.5 bits (227), Expect = 2e-19
Identities = 44/98 (44%), Positives = 59/98 (60%)
Frame = +2
Query: 314 RNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMI 493
+N NRPLSPH+TIYS+ L +SI HR TG+ L+ S G+ AL+ + Y+ ++
Sbjct: 44 KNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELV 103
Query: 494 EGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAK 607
+ L L PA + AK + PL YH NGIRHL WD K
Sbjct: 104 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGK 141
>AF081495-1|AAC31940.1| 135|Homo sapiens integral membrane protein
CII-3b protein.
Length = 135
Score = 76.2 bits (179), Expect = 1e-13
Identities = 37/94 (39%), Positives = 51/94 (54%)
Frame = +2
Query: 326 LNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLN 505
L SP L I ++ L +SI HR TG+ L+ S G+ AL+ + Y+ +++ L
Sbjct: 14 LRAHFSPQLCIRNWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLC 73
Query: 506 LSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAK 607
L PA + AK + PL YH NGIRHL WD K
Sbjct: 74 LGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGK 107
>AB211234-1|BAE46978.1| 135|Homo sapiens succinate dehydrogenase
complex, subunit C delta3 alternative splicing variant
protein.
Length = 135
Score = 76.2 bits (179), Expect = 1e-13
Identities = 37/94 (39%), Positives = 51/94 (54%)
Frame = +2
Query: 326 LNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLN 505
L SP L I ++ L +SI HR TG+ L+ S G+ AL+ + Y+ +++ L
Sbjct: 14 LRAHFSPQLCIRNWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLC 73
Query: 506 LSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAK 607
L PA + AK + PL YH NGIRHL WD K
Sbjct: 74 LGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGK 107
>AB201252-1|BAE46977.1| 116|Homo sapiens succinate dehydrogenase
complex, subunit C delta2+3 alternative splicing varian
protein.
Length = 116
Score = 70.9 bits (166), Expect = 4e-12
Identities = 33/84 (39%), Positives = 47/84 (55%)
Frame = +2
Query: 356 IYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLSPATLFLAK 535
+ S+ L +SI HR TG+ L+ S G+ AL+ + Y+ +++ L L PA + AK
Sbjct: 5 LLSWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAK 64
Query: 536 VIIAAPLGYHFANGIRHLYWDTAK 607
+ PL YH NGIRHL WD K
Sbjct: 65 FALVFPLMYHTWNGIRHLMWDLGK 88
>AB211235-1|BAE46979.1| 150|Homo sapiens succinate dehydrogenase
complex, subunit C delta5 alternative splicing variant
protein.
Length = 150
Score = 47.2 bits (107), Expect = 5e-05
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +2
Query: 314 RNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLT 421
+N NRPLSPH+TIYS+ L +SI HR TG+ L+
Sbjct: 44 KNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALS 79
>X68641-1|CAA48605.1| 175|Homo sapiens HIP protein.
Length = 175
Score = 25.0 bits (52), Expect(2) = 9.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 199 LKQISCEVEQRELRSSRL*CP 261
L Q+ E QREL S+R+ CP
Sbjct: 21 LSQVQGEEPQRELPSARIRCP 41
Score = 23.4 bits (48), Expect(2) = 9.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 376 CCALYHT*SNWNDVDNICQR 435
C AL+ + +W D D CQ+
Sbjct: 51 CYALFLSPKSWTDADLACQK 70
>S51768-1|AAB24642.1| 175|Homo sapiens PAP-H protein.
Length = 175
Score = 25.0 bits (52), Expect(2) = 9.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 199 LKQISCEVEQRELRSSRL*CP 261
L Q+ E QREL S+R+ CP
Sbjct: 21 LSQVQGEEPQRELPSARIRCP 41
Score = 23.4 bits (48), Expect(2) = 9.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 376 CCALYHT*SNWNDVDNICQR 435
C AL+ + +W D D CQ+
Sbjct: 51 CYALFLSPKSWTDADLACQK 70
>L15533-1|AAA60020.1| 175|Homo sapiens pancreatitis-associated
protein protein.
Length = 175
Score = 25.0 bits (52), Expect(2) = 9.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 199 LKQISCEVEQRELRSSRL*CP 261
L Q+ E QREL S+R+ CP
Sbjct: 21 LSQVQGEEPQRELPSARIRCP 41
Score = 23.4 bits (48), Expect(2) = 9.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 376 CCALYHT*SNWNDVDNICQR 435
C AL+ + +W D D CQ+
Sbjct: 51 CYALFLSPKSWTDADLACQK 70
>D13510-1|BAA02728.1| 175|Homo sapiens PAP homologous protein
protein.
Length = 175
Score = 25.0 bits (52), Expect(2) = 9.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 199 LKQISCEVEQRELRSSRL*CP 261
L Q+ E QREL S+R+ CP
Sbjct: 21 LSQVQGEEPQRELPSARIRCP 41
Score = 23.4 bits (48), Expect(2) = 9.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 376 CCALYHT*SNWNDVDNICQR 435
C AL+ + +W D D CQ+
Sbjct: 51 CYALFLSPKSWTDADLACQK 70
>BC036776-1|AAH36776.1| 175|Homo sapiens regenerating islet-derived
3 alpha protein.
Length = 175
Score = 25.0 bits (52), Expect(2) = 9.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 199 LKQISCEVEQRELRSSRL*CP 261
L Q+ E QREL S+R+ CP
Sbjct: 21 LSQVQGEEPQRELPSARIRCP 41
Score = 23.4 bits (48), Expect(2) = 9.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 376 CCALYHT*SNWNDVDNICQR 435
C AL+ + +W D D CQ+
Sbjct: 51 CYALFLSPKSWTDADLACQK 70
>AY544130-1|AAT11161.1| 175|Homo sapiens proliferation-inducing
protein 42 protein.
Length = 175
Score = 25.0 bits (52), Expect(2) = 9.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 199 LKQISCEVEQRELRSSRL*CP 261
L Q+ E QREL S+R+ CP
Sbjct: 21 LSQVQGEEPQRELPSARIRCP 41
Score = 23.4 bits (48), Expect(2) = 9.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 376 CCALYHT*SNWNDVDNICQR 435
C AL+ + +W D D CQ+
Sbjct: 51 CYALFLSPKSWTDADLACQK 70
>AY544128-1|AAT11159.1| 175|Homo sapiens proliferation-inducing
protein 34 protein.
Length = 175
Score = 25.0 bits (52), Expect(2) = 9.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 199 LKQISCEVEQRELRSSRL*CP 261
L Q+ E QREL S+R+ CP
Sbjct: 21 LSQVQGEEPQRELPSARIRCP 41
Score = 23.4 bits (48), Expect(2) = 9.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 376 CCALYHT*SNWNDVDNICQR 435
C AL+ + +W D D CQ+
Sbjct: 51 CYALFLSPKSWTDADLACQK 70
>AC069387-2|AAX93047.1| 175|Homo sapiens unknown protein.
Length = 175
Score = 25.0 bits (52), Expect(2) = 9.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 199 LKQISCEVEQRELRSSRL*CP 261
L Q+ E QREL S+R+ CP
Sbjct: 21 LSQVQGEEPQRELPSARIRCP 41
Score = 23.4 bits (48), Expect(2) = 9.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 376 CCALYHT*SNWNDVDNICQR 435
C AL+ + +W D D CQ+
Sbjct: 51 CYALFLSPKSWTDADLACQK 70
>M84337-1|AAA36415.1| 174|Homo sapiens pancreatitis associated
protein protein.
Length = 174
Score = 25.0 bits (52), Expect(2) = 9.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 199 LKQISCEVEQRELRSSRL*CP 261
L Q+ E QREL S+R+ CP
Sbjct: 21 LSQVQGEEPQRELPSARIRCP 41
Score = 23.4 bits (48), Expect(2) = 9.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 376 CCALYHT*SNWNDVDNICQR 435
C AL+ + +W D D CQ+
Sbjct: 51 CYALFLSPKSWTDADLACQK 70
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,161,110
Number of Sequences: 237096
Number of extensions: 1857079
Number of successful extensions: 3308
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3306
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -