Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7o21
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88315-1|AAM29668.1| 457|Caenorhabditis elegans Hypothetical pr... 182 2e-46
U88315-2|AAB42370.2| 434|Caenorhabditis elegans Hypothetical pr... 176 9e-45
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 33 0.12
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 1.9
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 1.9
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 1.9
AF078789-1|AAK21515.1| 392|Caenorhabditis elegans Hypothetical ... 29 2.5
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 3.3
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 29 3.3
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 29 3.3
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 29 3.3
U53148-6|AAB37075.1| 186|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF303248-1|AAG50206.1| 186|Caenorhabditis elegans 5I259 protein. 28 5.8
Z73898-6|CAA98067.2| 168|Caenorhabditis elegans Hypothetical pr... 27 7.7
AL132862-13|CAB60543.1| 385|Caenorhabditis elegans Hypothetical... 27 7.7
AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi dom... 27 7.7
>U88315-1|AAM29668.1| 457|Caenorhabditis elegans Hypothetical
protein C37H5.6a protein.
Length = 457
Score = 182 bits (443), Expect = 2e-46
Identities = 86/172 (50%), Positives = 115/172 (66%), Gaps = 3/172 (1%)
Frame = +2
Query: 89 MVTTVNSINTEINGELSRSCPSKKTKMENKVTVVLGAQWGDEGKGKVVDLLAVDS--DIV 262
M + + N E+ L++ T V+V+LGAQWGDEGKGK++D L + ++
Sbjct: 1 MGSVTSKTNDELESFLNKRLGGSMTSSNKTVSVLLGAQWGDEGKGKIIDYLIENHKINVT 60
Query: 263 CRCQGGNNAGHTVVVDGKEFDFHLLPSGIINQKCTSVIGNGVVIHLPGLFEELKKNELKG 442
RCQGGNNAGHTVV +G+++DFH+LPSGII+ C +VIGNGVV++L F EL N +
Sbjct: 61 ARCQGGNNAGHTVVANGRKYDFHILPSGIISPTCFNVIGNGVVVNLDAFFSELAHNGILE 120
Query: 443 MKGCEGRLVISDRAHLVFDIHQQVDGLQE-AEKGKNSLGTTKKGIGPAYSAK 595
G E R++IS AHLVF +H QVDG QE + KN +GTT +GIGP YS+K
Sbjct: 121 ESGWEKRIMISSEAHLVFGVHSQVDGRQEDSLAAKNKIGTTNRGIGPTYSSK 172
>U88315-2|AAB42370.2| 434|Caenorhabditis elegans Hypothetical
protein C37H5.6b protein.
Length = 434
Score = 176 bits (429), Expect = 9e-45
Identities = 82/148 (55%), Positives = 106/148 (71%), Gaps = 3/148 (2%)
Frame = +2
Query: 161 TKMENKVTVVLGAQWGDEGKGKVVDLLAVDS--DIVCRCQGGNNAGHTVVVDGKEFDFHL 334
T V+V+LGAQWGDEGKGK++D L + ++ RCQGGNNAGHTVV +G+++DFH+
Sbjct: 2 TSSNKTVSVLLGAQWGDEGKGKIIDYLIENHKINVTARCQGGNNAGHTVVANGRKYDFHI 61
Query: 335 LPSGIINQKCTSVIGNGVVIHLPGLFEELKKNELKGMKGCEGRLVISDRAHLVFDIHQQV 514
LPSGII+ C +VIGNGVV++L F EL N + G E R++IS AHLVF +H QV
Sbjct: 62 LPSGIISPTCFNVIGNGVVVNLDAFFSELAHNGILEESGWEKRIMISSEAHLVFGVHSQV 121
Query: 515 DGLQE-AEKGKNSLGTTKKGIGPAYSAK 595
DG QE + KN +GTT +GIGP YS+K
Sbjct: 122 DGRQEDSLAAKNKIGTTNRGIGPTYSSK 149
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -1
Query: 596 PSRSRPARCPFSWCRASSYPSPLPGDRRPVDVYRKQDEPCPRSRVCLRNPSCLS 435
PS RP CP SSYP ++ PVD Y +D +C P C+S
Sbjct: 394 PSEIRPT-CPVGEPHESSYPPDYGCNKCPVDYYCHRDSVATEKSICCPKP-CVS 445
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -1
Query: 587 SRPARCPFSW-CRASSYPSPLPGDRRP---VDVYRKQDEPCPRSRVCLRNPSCLSARSSS 420
S P CP + C +++ PL G + + Y Q + RVC+RN +C R ++
Sbjct: 1824 SAPEVCPPNHDCSSAAVCEPLGGMKYQCVCIQGYVDQSPGSQKGRVCVRNNACHDPRLNT 1883
Query: 419 APQTVRAGGSPRHY 378
+ PR Y
Sbjct: 1884 CSRNAICYDEPRGY 1897
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -1
Query: 587 SRPARCPFSW-CRASSYPSPLPGDRRP---VDVYRKQDEPCPRSRVCLRNPSCLSARSSS 420
S P CP + C +++ PL G + + Y Q + RVC+RN +C R ++
Sbjct: 2408 SAPEVCPPNHDCSSAAVCEPLGGMKYQCVCIQGYVDQSPGSQKGRVCVRNNACHDPRLNT 2467
Query: 419 APQTVRAGGSPRHY 378
+ PR Y
Sbjct: 2468 CSRNAICYDEPRGY 2481
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -1
Query: 587 SRPARCPFSW-CRASSYPSPLPGDRRP---VDVYRKQDEPCPRSRVCLRNPSCLSARSSS 420
S P CP + C +++ PL G + + Y Q + RVC+RN +C R ++
Sbjct: 1824 SAPEVCPPNHDCSSAAVCEPLGGMKYQCVCIQGYVDQSPGSQKGRVCVRNNACHDPRLNT 1883
Query: 419 APQTVRAGGSPRHY 378
+ PR Y
Sbjct: 1884 CSRNAICYDEPRGY 1897
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -1
Query: 587 SRPARCPFSW-CRASSYPSPLPGDRRP---VDVYRKQDEPCPRSRVCLRNPSCLSARSSS 420
S P CP + C +++ PL G + + Y Q + RVC+RN +C R ++
Sbjct: 2408 SAPEVCPPNHDCSSAAVCEPLGGMKYQCVCIQGYVDQSPGSQKGRVCVRNNACHDPRLNT 2467
Query: 419 APQTVRAGGSPRHY 378
+ PR Y
Sbjct: 2468 CSRNAICYDEPRGY 2481
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -1
Query: 587 SRPARCPFSW-CRASSYPSPLPGDRRP---VDVYRKQDEPCPRSRVCLRNPSCLSARSSS 420
S P CP + C +++ PL G + + Y Q + RVC+RN +C R ++
Sbjct: 2408 SAPEVCPPNHDCSSAAVCEPLGGMKYQCVCIQGYVDQSPGSQKGRVCVRNNACHDPRLNT 2467
Query: 419 APQTVRAGGSPRHY 378
+ PR Y
Sbjct: 2468 CSRNAICYDEPRGY 2481
>AF078789-1|AAK21515.1| 392|Caenorhabditis elegans Hypothetical
protein Y44E3B.2 protein.
Length = 392
Score = 29.1 bits (62), Expect = 2.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 209 RPTEHPKQQLLCFPFW 162
R TE+PK CFPFW
Sbjct: 261 RKTEYPKSDERCFPFW 276
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = -3
Query: 279 PP*QRQTMSESTASKSTTFPLPSSPH*APKTTVTLFSILVFFDGHERDNSPLISVLIE 106
P Q+ E + P+PS H +TT T +FD HE PL+S IE
Sbjct: 3310 PHASEQSQIEEEHERFEESPVPSEKHHVTETTTTTTVTREYFDEHE----PLVSQEIE 3363
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = -3
Query: 279 PP*QRQTMSESTASKSTTFPLPSSPH*APKTTVTLFSILVFFDGHERDNSPLISVLIE 106
P Q+ E + P+PS H +TT T +FD HE PL+S IE
Sbjct: 3310 PHASEQSQIEEEHERFEESPVPSEKHHVTETTTTTTVTREYFDEHE----PLVSQEIE 3363
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -1
Query: 371 QTCTSG**CHLATDGSQILCRQLPLCVQRCSRPDN 267
Q C +G CH+ +C P V RC +P N
Sbjct: 341 QGCGTGSYCHVGAQTQTTVCCPKPAAVDRCQQPLN 375
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -1
Query: 371 QTCTSG**CHLATDGSQILCRQLPLCVQRCSRPDN 267
Q C +G CH+ +C P V RC +P N
Sbjct: 341 QGCGTGSYCHVGAQTQTTVCCPKPAAVDRCQQPLN 375
>U53148-6|AAB37075.1| 186|Caenorhabditis elegans Hypothetical
protein C26F1.3 protein.
Length = 186
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 413 EELKKNELKGMKGCEGRLVISDRAHLVFDIHQQV-DGLQEAEKGKNSL 553
++LKK LK MK EGR + + ++ H Q L+ K K ++
Sbjct: 92 KDLKKRNLKYMKFQEGRRIDKKKGRILVQAHMQTKQDLKSLRKEKKAI 139
>AF303248-1|AAG50206.1| 186|Caenorhabditis elegans 5I259 protein.
Length = 186
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 413 EELKKNELKGMKGCEGRLVISDRAHLVFDIHQQV-DGLQEAEKGKNSL 553
++LKK LK MK EGR + + ++ H Q L+ K K ++
Sbjct: 92 KDLKKRNLKYMKFQEGRRIDKKKGRILVQAHMQTKQDLKSLRKEKKAI 139
>Z73898-6|CAA98067.2| 168|Caenorhabditis elegans Hypothetical
protein ZK822.2 protein.
Length = 168
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 389 VIHLPGLFEELKKNELKGMKGCEGR 463
+ ++ GLFE ++NE KG +G GR
Sbjct: 140 LFYIGGLFEHPRRNETKGSEGKGGR 164
>AL132862-13|CAB60543.1| 385|Caenorhabditis elegans Hypothetical
protein Y73F8A.18 protein.
Length = 385
Score = 27.5 bits (58), Expect = 7.7
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +2
Query: 356 QKCTSVIGNGVVIHLPGLFEELKKNELKGMKGCEGRLVISDRAHLVFDIHQQVDGLQEAE 535
+KC+++ + ++ L E+ K+ MK GRL+I + F + GL+ E
Sbjct: 48 KKCSTICADLIINDQTDLTEKQMKSTFSKMKNLIGRLII---VNTQFKSASFLAGLESIE 104
Query: 536 KGKNSLGTT 562
G L TT
Sbjct: 105 CGGTDLVTT 113
>AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi
domain-containing protein2 protein.
Length = 975
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/79 (25%), Positives = 35/79 (44%)
Frame = +2
Query: 275 GGNNAGHTVVVDGKEFDFHLLPSGIINQKCTSVIGNGVVIHLPGLFEELKKNELKGMKGC 454
G N ++V+DG + FH+ ++ QK +S+ N + + G E +KG+ C
Sbjct: 307 GRNQNNPSIVIDGMKVAFHM--EQLVFQKLSSITSN-LANGITGSERERCAAVIKGL-DC 362
Query: 455 EGRLVISDRAHLVFDIHQQ 511
R H + IH +
Sbjct: 363 HSNYRGRTRHHKIESIHHE 381
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,681,264
Number of Sequences: 27780
Number of extensions: 333680
Number of successful extensions: 995
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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