Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7o09
(693 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007306-1|AAP35970.1| 174|Homo sapiens eukaryotic translation ... 54 6e-07
BC005291-1|AAH05291.1| 174|Homo sapiens eukaryotic translation ... 54 6e-07
AL451187-1|CAI14747.1| 174|Homo sapiens eukaryotic translation ... 54 6e-07
AL355499-1|CAH72539.1| 174|Homo sapiens eukaryotic translation ... 54 6e-07
AL023694-1|CAI21644.1| 174|Homo sapiens eukaryotic translation ... 54 6e-07
AB011079-1|BAA24926.1| 174|Homo sapiens p18 component of aminoa... 54 6e-07
U24169-1|AAC50391.1| 312|Homo sapiens JTV-1 protein. 30 6.8
BC013630-1|AAH13630.1| 320|Homo sapiens JTV1 gene protein. 30 6.8
BC010156-1|AAH10156.1| 320|Homo sapiens JTV1 gene protein. 30 6.8
BC002853-1|AAH02853.1| 320|Homo sapiens JTV1 gene protein. 30 6.8
AC005995-2|AAS00389.1| 320|Homo sapiens unknown protein. 30 6.8
>BT007306-1|AAP35970.1| 174|Homo sapiens eukaryotic translation
elongation factor 1 epsilon 1 protein.
Length = 174
Score = 53.6 bits (123), Expect = 6e-07
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Frame = +2
Query: 296 IKMIGKYLDVSVGAVCYNTDKVPTAVLENKN---VEGFVTIILSMVSKCGT----ASSEE 454
+ ++ K L +S G + VL+ N + G TI +V + S+ E
Sbjct: 7 LSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAHLVKQANKEYLLGSTAE 66
Query: 455 QRLLTYQWLEY-ISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFLTIADVALYYIV 631
++ + QWLEY ++ + N L+++N L+ YLTG T+AD+ LYY +
Sbjct: 67 EKAIVQQWLEYRVTQVDGHSSKNDIHTL--LKDLNSYLEDKVYLTGYNFTLADILLYYGL 124
Query: 632 YPLLEHMSVAERDAFVHLCR 691
+ + ++V E++ ++++ R
Sbjct: 125 HRFIVDLTVQEKEKYLNVSR 144
>BC005291-1|AAH05291.1| 174|Homo sapiens eukaryotic translation
elongation factor 1 epsilon 1 protein.
Length = 174
Score = 53.6 bits (123), Expect = 6e-07
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Frame = +2
Query: 296 IKMIGKYLDVSVGAVCYNTDKVPTAVLENKN---VEGFVTIILSMVSKCGT----ASSEE 454
+ ++ K L +S G + VL+ N + G TI +V + S+ E
Sbjct: 7 LSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAHLVKQANKEYLLGSTAE 66
Query: 455 QRLLTYQWLEY-ISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFLTIADVALYYIV 631
++ + QWLEY ++ + N L+++N L+ YLTG T+AD+ LYY +
Sbjct: 67 EKAIVQQWLEYRVTQVDGHSSKNDIHTL--LKDLNSYLEDKVYLTGYNFTLADILLYYGL 124
Query: 632 YPLLEHMSVAERDAFVHLCR 691
+ + ++V E++ ++++ R
Sbjct: 125 HRFIVDLTVQEKEKYLNVSR 144
>AL451187-1|CAI14747.1| 174|Homo sapiens eukaryotic translation
elongation factor 1 epsilon 1 protein.
Length = 174
Score = 53.6 bits (123), Expect = 6e-07
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Frame = +2
Query: 296 IKMIGKYLDVSVGAVCYNTDKVPTAVLENKN---VEGFVTIILSMVSKCGT----ASSEE 454
+ ++ K L +S G + VL+ N + G TI +V + S+ E
Sbjct: 7 LSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAHLVKQANKEYLLGSTAE 66
Query: 455 QRLLTYQWLEY-ISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFLTIADVALYYIV 631
++ + QWLEY ++ + N L+++N L+ YLTG T+AD+ LYY +
Sbjct: 67 EKAIVQQWLEYRVTQVDGHSSKNDIHTL--LKDLNSYLEDKVYLTGYNFTLADILLYYGL 124
Query: 632 YPLLEHMSVAERDAFVHLCR 691
+ + ++V E++ ++++ R
Sbjct: 125 HRFIVDLTVQEKEKYLNVSR 144
>AL355499-1|CAH72539.1| 174|Homo sapiens eukaryotic translation
elongation factor 1 epsilon 1 protein.
Length = 174
Score = 53.6 bits (123), Expect = 6e-07
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Frame = +2
Query: 296 IKMIGKYLDVSVGAVCYNTDKVPTAVLENKN---VEGFVTIILSMVSKCGT----ASSEE 454
+ ++ K L +S G + VL+ N + G TI +V + S+ E
Sbjct: 7 LSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAHLVKQANKEYLLGSTAE 66
Query: 455 QRLLTYQWLEY-ISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFLTIADVALYYIV 631
++ + QWLEY ++ + N L+++N L+ YLTG T+AD+ LYY +
Sbjct: 67 EKAIVQQWLEYRVTQVDGHSSKNDIHTL--LKDLNSYLEDKVYLTGYNFTLADILLYYGL 124
Query: 632 YPLLEHMSVAERDAFVHLCR 691
+ + ++V E++ ++++ R
Sbjct: 125 HRFIVDLTVQEKEKYLNVSR 144
>AL023694-1|CAI21644.1| 174|Homo sapiens eukaryotic translation
elongation factor 1 epsilon 1 protein.
Length = 174
Score = 53.6 bits (123), Expect = 6e-07
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Frame = +2
Query: 296 IKMIGKYLDVSVGAVCYNTDKVPTAVLENKN---VEGFVTIILSMVSKCGT----ASSEE 454
+ ++ K L +S G + VL+ N + G TI +V + S+ E
Sbjct: 7 LSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAHLVKQANKEYLLGSTAE 66
Query: 455 QRLLTYQWLEY-ISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFLTIADVALYYIV 631
++ + QWLEY ++ + N L+++N L+ YLTG T+AD+ LYY +
Sbjct: 67 EKAIVQQWLEYRVTQVDGHSSKNDIHTL--LKDLNSYLEDKVYLTGYNFTLADILLYYGL 124
Query: 632 YPLLEHMSVAERDAFVHLCR 691
+ + ++V E++ ++++ R
Sbjct: 125 HRFIVDLTVQEKEKYLNVSR 144
>AB011079-1|BAA24926.1| 174|Homo sapiens p18 component of
aminoacyl-tRNA synthetase complex protein.
Length = 174
Score = 53.6 bits (123), Expect = 6e-07
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Frame = +2
Query: 296 IKMIGKYLDVSVGAVCYNTDKVPTAVLENKN---VEGFVTIILSMVSKCGT----ASSEE 454
+ ++ K L +S G + VL+ N + G TI +V + S+ E
Sbjct: 7 LSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAHLVKQANKEYLLGSTAE 66
Query: 455 QRLLTYQWLEY-ISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFLTIADVALYYIV 631
++ + QWLEY ++ + N L+++N L+ YLTG T+AD+ LYY +
Sbjct: 67 EKAIVQQWLEYRVTQVDGHSSKNDIHTL--LKDLNSYLEDKVYLTGYNFTLADILLYYGL 124
Query: 632 YPLLEHMSVAERDAFVHLCR 691
+ + ++V E++ ++++ R
Sbjct: 125 HRFIVDLTVQEKEKYLNVSR 144
>U24169-1|AAC50391.1| 312|Homo sapiens JTV-1 protein.
Length = 312
Score = 30.3 bits (65), Expect = 6.8
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = +2
Query: 389 VEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQEINRALQ 568
+EG I + S G + L W++ I++F + ++ A F + +N AL
Sbjct: 207 IEGEGNIARFLFSLFGQKHNAVNATLIDSWVD-IAIFQLKEGSSKEKAAVF-RSMNSALG 264
Query: 569 SNTYLTGQFLTIADVALYYIV 631
+ +L G LT+ADV L+ ++
Sbjct: 265 KSPWLAGNELTVADVVLWSVL 285
>BC013630-1|AAH13630.1| 320|Homo sapiens JTV1 gene protein.
Length = 320
Score = 30.3 bits (65), Expect = 6.8
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = +2
Query: 389 VEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQEINRALQ 568
+EG I + S G + L W++ I++F + ++ A F + +N AL
Sbjct: 207 IEGEGNIARFLFSLFGQKHNAVNATLIDSWVD-IAIFQLKEGSSKEKAAVF-RSMNSALG 264
Query: 569 SNTYLTGQFLTIADVALYYIV 631
+ +L G LT+ADV L+ ++
Sbjct: 265 KSPWLAGNELTVADVVLWSVL 285
>BC010156-1|AAH10156.1| 320|Homo sapiens JTV1 gene protein.
Length = 320
Score = 30.3 bits (65), Expect = 6.8
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = +2
Query: 389 VEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQEINRALQ 568
+EG I + S G + L W++ I++F + ++ A F + +N AL
Sbjct: 207 IEGEGNIARFLFSLFGQKHNAVNATLIDSWVD-IAIFQLKEGSSKEKAAVF-RSMNSALG 264
Query: 569 SNTYLTGQFLTIADVALYYIV 631
+ +L G LT+ADV L+ ++
Sbjct: 265 KSPWLAGNELTVADVVLWSVL 285
>BC002853-1|AAH02853.1| 320|Homo sapiens JTV1 gene protein.
Length = 320
Score = 30.3 bits (65), Expect = 6.8
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = +2
Query: 389 VEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQEINRALQ 568
+EG I + S G + L W++ I++F + ++ A F + +N AL
Sbjct: 207 IEGEGNIARFLFSLFGQKHNAVNATLIDSWVD-IAIFQLKEGSSKEKAAVF-RSMNSALG 264
Query: 569 SNTYLTGQFLTIADVALYYIV 631
+ +L G LT+ADV L+ ++
Sbjct: 265 KSPWLAGNELTVADVVLWSVL 285
>AC005995-2|AAS00389.1| 320|Homo sapiens unknown protein.
Length = 320
Score = 30.3 bits (65), Expect = 6.8
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = +2
Query: 389 VEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQEINRALQ 568
+EG I + S G + L W++ I++F + ++ A F + +N AL
Sbjct: 207 IEGEGNIARFLFSLFGQKHNAVNATLIDSWVD-IAIFQLKEGSSKEKAAVF-RSMNSALG 264
Query: 569 SNTYLTGQFLTIADVALYYIV 631
+ +L G LT+ADV L+ ++
Sbjct: 265 KSPWLAGNELTVADVVLWSVL 285
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,251,329
Number of Sequences: 237096
Number of extensions: 1801160
Number of successful extensions: 6150
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6144
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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