Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7o09
         (693 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical pr...    32   0.45 
Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical pr...    32   0.45 
Z68014-4|CAA92026.2|  588|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AF039047-2|ABR92603.1|  403|Caenorhabditis elegans Serpentine re...    29   4.2  
AF039047-1|AAB94224.2|  403|Caenorhabditis elegans Serpentine re...    29   4.2  
U39995-5|AAF99994.4|  250|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AC006804-5|AAF60754.1|  213|Caenorhabditis elegans Hypothetical ...    27   9.6  

>Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical
           protein F17C11.9b protein.
          Length = 373

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = +2

Query: 542 LQEINRALQSNTYLTGQFLTIADVALYYIVYPLLEHMSVAE-RDAFVHLCR 691
           LQ ++R L   TYL G+ L++ADV++   + P  +++  A  R + V++ R
Sbjct: 92  LQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIVNVTR 142


>Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical
           protein F17C11.9a protein.
          Length = 398

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = +2

Query: 542 LQEINRALQSNTYLTGQFLTIADVALYYIVYPLLEHMSVAE-RDAFVHLCR 691
           LQ ++R L   TYL G+ L++ADV++   + P  +++  A  R + V++ R
Sbjct: 117 LQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIVNVTR 167


>Z68014-4|CAA92026.2|  588|Caenorhabditis elegans Hypothetical
           protein W04G3.4 protein.
          Length = 588

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
 Frame = +2

Query: 437 TASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQEINR--ALQSNTYLTGQFLTIAD 610
           ++ S+E+ +LT + L+Y+     + V      +KFL E+ R  A + N  LT   L    
Sbjct: 56  SSPSQEEAMLTIRALDYLVRNGGEKVHERCGRYKFLNELVRLIAPKYNGKLTSDALKTEI 115

Query: 611 VALYYIVYPLLEHM 652
           + L +I    ++H+
Sbjct: 116 IKLLFIWQLSIKHI 129


>AF039047-2|ABR92603.1|  403|Caenorhabditis elegans Serpentine
           receptor, class r protein4, isoform b protein.
          Length = 403

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 401 VTIILSMVSKCGTASSEEQRLLTYQWLE 484
           + +ILSM+ +  T   EE +LLT+ W E
Sbjct: 64  IVVILSMLYRAITFLGEEGKLLTFNWSE 91


>AF039047-1|AAB94224.2|  403|Caenorhabditis elegans Serpentine
           receptor, class r protein4, isoform a protein.
          Length = 403

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 401 VTIILSMVSKCGTASSEEQRLLTYQWLE 484
           + +ILSM+ +  T   EE +LLT+ W E
Sbjct: 64  IVVILSMLYRAITFLGEEGKLLTFNWSE 91


>U39995-5|AAF99994.4|  250|Caenorhabditis elegans Hypothetical
           protein M60.6 protein.
          Length = 250

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
 Frame = +2

Query: 305 IGKYLDVSVGAVCYNTDKVPTAVLEN-KNVEGFVTIILSMVSKCGTASSEEQRLLTY--Q 475
           +G  + V  G   Y + ++ T  L   + +  F  +++ +V  CG+AS     ++TY   
Sbjct: 53  LGIIMIVLSGLADYASTRINTIRLHGLEEICSFYFVLVGLVGICGSASYRRGLVITYLVM 112

Query: 476 WLEYISMFSNQAVANSTFAFKFLQ 547
            +  I +F    +  S+F   F Q
Sbjct: 113 CIHSIFIFVPAIITVSSFDIHFYQ 136


>AC006804-5|AAF60754.1|  213|Caenorhabditis elegans Hypothetical
           protein Y53G8B.1 protein.
          Length = 213

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +2

Query: 533 FKFLQEINRALQSNTYLTGQFLTIADVALYYIVYPLLEHMSV 658
           FK L+E+ + + S  +  G  ++IAD+ L  IVY  +E   V
Sbjct: 138 FKALEELLQ-MHSGDFCVGNQISIADICLPSIVYNAIEKYHV 178


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,746,555
Number of Sequences: 27780
Number of extensions: 330620
Number of successful extensions: 652
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)