Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7o08
(592 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q94522 Cluster: Succinyl-CoA ligase [GDP-forming] subun... 211 1e-53
UniRef50_P53597 Cluster: Succinyl-CoA ligase [GDP-forming] subun... 194 1e-48
UniRef50_Q9AKE1 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 152 5e-36
UniRef50_P45102 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 148 1e-34
UniRef50_A5ATZ1 Cluster: Putative uncharacterized protein; n=2; ... 135 8e-31
UniRef50_O28733 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 131 1e-29
UniRef50_A6RFY2 Cluster: Putative uncharacterized protein; n=1; ... 128 7e-29
UniRef50_UPI000023F548 Cluster: hypothetical protein FG11485.1; ... 127 2e-28
UniRef50_A6DYT9 Cluster: Succinyl-CoA synthetase, alpha subunit;... 127 2e-28
UniRef50_P53400 Cluster: Succinyl-CoA ligase [GDP-forming] subun... 127 2e-28
UniRef50_A2QQL8 Cluster: Contig An08c0100, complete genome; n=3;... 123 3e-27
UniRef50_Q2U2T2 Cluster: Succinyl-CoA synthetase; n=10; Ascomyco... 122 8e-27
UniRef50_Q4PDB0 Cluster: Putative uncharacterized protein; n=1; ... 120 3e-26
UniRef50_Q8A9M8 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 118 8e-26
UniRef50_Q9YD40 Cluster: Succinyl-CoA synthetase alpha chain; n=... 117 2e-25
UniRef50_Q58643 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 113 2e-24
UniRef50_O26663 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 111 1e-23
UniRef50_Q7U0Z0 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 110 2e-23
UniRef50_Q18XG5 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 107 1e-22
UniRef50_Q07LP7 Cluster: Succinyl-CoA synthetase, alpha subunit;... 107 1e-22
UniRef50_Q2V0P6 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 103 4e-21
UniRef50_UPI000023DDE4 Cluster: hypothetical protein FG07898.1; ... 96 6e-19
UniRef50_A7I683 Cluster: Succinyl-CoA synthetase, alpha subunit;... 93 4e-18
UniRef50_Q7SDJ1 Cluster: Putative uncharacterized protein NCU098... 91 2e-17
UniRef50_Q18UM7 Cluster: CoA-binding; n=2; Desulfitobacterium ha... 88 2e-16
UniRef50_Q6LYN5 Cluster: Succinate--CoA ligase (ADP-forming); al... 87 2e-16
UniRef50_Q2RLF6 Cluster: CoA-binding; n=3; Clostridia|Rep: CoA-b... 85 1e-15
UniRef50_A7HMU3 Cluster: CoA-binding domain protein; n=2; Thermo... 82 8e-15
UniRef50_A7DNB4 Cluster: CoA-binding domain protein; n=1; Candid... 82 8e-15
UniRef50_A0RTT7 Cluster: Succinyl-CoA synthetase, alpha subunit;... 81 2e-14
UniRef50_O67729 Cluster: Succinyl-CoA ligase alpha subunit; n=4;... 68 1e-10
UniRef50_Q8YQC0 Cluster: Succinyl-CoA synthetase alpha chain; n=... 67 3e-10
UniRef50_Q05FP1 Cluster: Succinyl-CoA synthetase alpha subunit; ... 66 6e-10
UniRef50_P74286 Cluster: Succinyl-CoA synthetase; n=3; Chroococc... 46 5e-04
UniRef50_A7ENF5 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_A5P1R6 Cluster: Putative uncharacterized protein; n=1; ... 40 0.044
UniRef50_Q968N3 Cluster: Succinyl CoA synthetase alpha subunit; ... 39 0.076
UniRef50_A0LDT0 Cluster: CoA-binding domain protein; n=4; Proteo... 38 0.13
UniRef50_A5C1W8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.23
UniRef50_Q8EVW2 Cluster: Transcriptional antiterminator BglG fam... 37 0.41
UniRef50_A1FZP5 Cluster: Putative uncharacterized protein; n=2; ... 36 0.54
UniRef50_UPI00006CB349 Cluster: EGF-like domain containing prote... 35 1.6
UniRef50_UPI00006A20BC Cluster: UPI00006A20BC related cluster; n... 34 2.2
UniRef50_A4ALC7 Cluster: Putative uncharacterized protein; n=5; ... 34 2.9
UniRef50_UPI0000D5572D Cluster: PREDICTED: similar to CG6493-PA;... 33 5.0
UniRef50_A7CFE5 Cluster: Putative uncharacterized protein; n=2; ... 33 5.0
UniRef50_A0QKT7 Cluster: Ftsk/spoiiie family protein; n=2; Mycob... 33 6.6
UniRef50_Q6BG85 Cluster: Extracellular matrix-like protein, puta... 33 6.6
UniRef50_Q6MCJ7 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
UniRef50_Q6F106 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
UniRef50_Q6D7M5 Cluster: Penicillin-binding protein 5; n=72; Pro... 32 8.7
UniRef50_A7IQG8 Cluster: CoA-binding domain protein; n=1; Xantho... 32 8.7
UniRef50_A6FTL0 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
UniRef50_Q9V1S3 Cluster: AcdA-1 acetate--coA ligase (ADP-forming... 32 8.7
>UniRef50_Q94522 Cluster: Succinyl-CoA ligase [GDP-forming] subunit
alpha, mitochondrial precursor; n=81; cellular
organisms|Rep: Succinyl-CoA ligase [GDP-forming] subunit
alpha, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 328
Score = 211 bits (515), Expect = 1e-53
Identities = 105/163 (64%), Positives = 121/163 (74%)
Frame = +3
Query: 102 MAMPVRVLSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHSQQA 281
MA +R L K +DG G VR S Y +TR NL L +++VI QGFTGKQGTFHSQQA
Sbjct: 1 MAASMRALLKVRDGFVAG-VRCNS--QYNKTRGNLKLNGDSRVICQGFTGKQGTFHSQQA 57
Query: 282 LDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGXXXXXXXXXXX 461
L+YGTK+VGG+SPKK GT+HLG PVF +V EAK T A+VIYVPPPG
Sbjct: 58 LEYGTKLVGGISPKKGGTQHLGLPVFASVAEAKKATDPHATVIYVPPPGAAAAIIEALEA 117
Query: 462 XMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGIIAP 590
+PLIVCITEGVPQHDMV+VKHAL+ Q+KSRLVGPNCPGIIAP
Sbjct: 118 EIPLIVCITEGVPQHDMVKVKHALISQSKSRLVGPNCPGIIAP 160
>UniRef50_P53597 Cluster: Succinyl-CoA ligase [GDP-forming] subunit
alpha, mitochondrial precursor; n=313; cellular
organisms|Rep: Succinyl-CoA ligase [GDP-forming] subunit
alpha, mitochondrial precursor - Homo sapiens (Human)
Length = 333
Score = 194 bits (474), Expect = 1e-48
Identities = 89/136 (65%), Positives = 103/136 (75%)
Frame = +3
Query: 183 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 362
Y +R++L + TK+I QGFTGKQGTFHSQQAL+YGTK+VGG +P K G HLG PVF
Sbjct: 30 YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89
Query: 363 TVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQ 542
TVKEAK TGATASVIYVPPP +PL+VCITEG+PQ DMVRVKH LLRQ
Sbjct: 90 TVKEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQ 149
Query: 543 NKSRLVGPNCPGIIAP 590
K+RL+GPNCPG+I P
Sbjct: 150 EKTRLIGPNCPGVINP 165
>UniRef50_Q9AKE1 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=29; cellular organisms|Rep: Succinyl-CoA ligase
[ADP-forming] subunit alpha - Rickettsia typhi
Length = 292
Score = 152 bits (369), Expect = 5e-36
Identities = 72/129 (55%), Positives = 91/129 (70%)
Frame = +3
Query: 204 LILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKA 383
+++ +TKVI QGFTG QGTFHS+QA+ YGT +VGGV+P K G HL PV+ TV EAKA
Sbjct: 3 ILINKKTKVICQGFTGSQGTFHSEQAIAYGTNMVGGVTPGKGGHTHLNLPVYNTVHEAKA 62
Query: 384 GTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVG 563
T A ASVIYVPP + ++VCITEG+P DMV+VK AL+ +K+RL+G
Sbjct: 63 KTDANASVIYVPPGFAADSILEAIDAKIEVVVCITEGIPVLDMVKVKRALI-GSKTRLIG 121
Query: 564 PNCPGIIAP 590
PNCPG+I P
Sbjct: 122 PNCPGVITP 130
>UniRef50_P45102 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=125; Bacteria|Rep: Succinyl-CoA ligase
[ADP-forming] subunit alpha - Haemophilus influenzae
Length = 293
Score = 148 bits (358), Expect = 1e-34
Identities = 71/129 (55%), Positives = 87/129 (67%)
Frame = +3
Query: 204 LILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKA 383
+++ TKVI QGFTG QGTFHS+QAL YGT++VGGVSP K GT HLG PVF TV+EA
Sbjct: 3 ILIDKNTKVICQGFTGGQGTFHSEQALAYGTQLVGGVSPNKGGTTHLGLPVFNTVREAVE 62
Query: 384 GTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVG 563
TG TA+VIYVP + LIVCITEG+P DM++VK L + ++G
Sbjct: 63 NTGVTATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQK-LNETGVVMIG 121
Query: 564 PNCPGIIAP 590
PNCPG+I P
Sbjct: 122 PNCPGVITP 130
>UniRef50_A5ATZ1 Cluster: Putative uncharacterized protein; n=2;
cellular organisms|Rep: Putative uncharacterized protein
- Vitis vinifera (Grape)
Length = 468
Score = 135 bits (326), Expect = 8e-31
Identities = 61/103 (59%), Positives = 74/103 (71%)
Frame = +3
Query: 204 LILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKA 383
+ + T+VI QG TGK GTFH++QA++YGTK+VGGV+PKK G EHLG P+F TV EAKA
Sbjct: 35 VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGMEHLGLPIFNTVAEAKA 94
Query: 384 GTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDM 512
T A ASVIYVPPP + L+VCITEG+PQHDM
Sbjct: 95 ETRANASVIYVPPPFAAAAIMEAVEAELDLVVCITEGIPQHDM 137
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +3
Query: 516 RVKHALLRQNKSRLVGPNCPGIIAP 590
+VK AL RQ+K+RL+GPNCPGII P
Sbjct: 340 KVKAALNRQSKTRLIGPNCPGIIKP 364
>UniRef50_O28733 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha 1; n=72; cellular organisms|Rep: Succinyl-CoA
ligase [ADP-forming] subunit alpha 1 - Archaeoglobus
fulgidus
Length = 291
Score = 131 bits (317), Expect = 1e-29
Identities = 63/129 (48%), Positives = 87/129 (67%)
Frame = +3
Query: 204 LILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKA 383
+++ T+VIVQG TG QG+F +++ LDYGTKVVGGV+P K G+E G PV+ TV+EA A
Sbjct: 6 ILVDENTRVIVQGITGFQGSFQAKRMLDYGTKVVGGVTPGKGGSEVHGIPVYNTVEEAVA 65
Query: 384 GTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVG 563
T A S+IYVP + L+VC+TEG+P +D + + H LR+ KS L+G
Sbjct: 66 ETNADTSIIYVPARFATDAIFEAFDAGLRLVVCVTEGIPLYDEMLI-HRKLREVKSMLLG 124
Query: 564 PNCPGIIAP 590
PNCPG+I+P
Sbjct: 125 PNCPGVISP 133
>UniRef50_A6RFY2 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 138
Score = 128 bits (310), Expect = 7e-29
Identities = 61/99 (61%), Positives = 71/99 (71%)
Frame = +3
Query: 183 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 362
YA T NL + S+TKVI QGFTGKQGTFH+QQA+DYGT VVGG +PKKAG HLGKPVF
Sbjct: 30 YAATADNLRINSDTKVIYQGFTGKQGTFHAQQAIDYGTNVVGGTNPKKAGQTHLGKPVFA 89
Query: 363 TVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIV 479
TV++A TGATAS I+VPPP +PL+V
Sbjct: 90 TVRDAVKETGATASAIFVPPPLAAKSIEEAIESEVPLVV 128
>UniRef50_UPI000023F548 Cluster: hypothetical protein FG11485.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG11485.1 - Gibberella zeae PH-1
Length = 320
Score = 127 bits (307), Expect = 2e-28
Identities = 63/131 (48%), Positives = 82/131 (62%)
Frame = +3
Query: 198 KNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEA 377
+NL++ T+VI QGFTGK T +++ A+ YGT +VGGVSPKK GT +L PVF TV+ A
Sbjct: 41 QNLMVNETTRVIYQGFTGKTATNNARDAIAYGTNIVGGVSPKKGGTTNLDLPVFATVRGA 100
Query: 378 KAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRL 557
AS+++VP +PLIV I E +P HDM+RV L Q+KSRL
Sbjct: 101 AQSVRPNASLVHVPASFAAGAIEEAIEAEIPLIVAIVEHIPVHDMLRVHEILRTQSKSRL 160
Query: 558 VGPNCPGIIAP 590
GPN PGI+AP
Sbjct: 161 KGPNTPGILAP 171
>UniRef50_A6DYT9 Cluster: Succinyl-CoA synthetase, alpha subunit;
n=2; Roseovarius|Rep: Succinyl-CoA synthetase, alpha
subunit - Roseovarius sp. TM1035
Length = 299
Score = 127 bits (307), Expect = 2e-28
Identities = 61/129 (47%), Positives = 82/129 (63%)
Frame = +3
Query: 204 LILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKA 383
+ + SET++IVQG TG+ GTF++ +A+ YGT VGGV P K G HLG P+F TV+EA
Sbjct: 3 IFVNSETRLIVQGMTGRSGTFYTDEAMRYGTTCVGGVRPGKGGARHLGLPLFNTVREAVE 62
Query: 384 GTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVG 563
T A AS++ VP P + ++VC+TE VPQHDM RVK AL + + L+G
Sbjct: 63 ATQANASLVIVPAPQAGPAMIEAIEAGVSVVVCVTERVPQHDMSRVKQALAGTD-TILIG 121
Query: 564 PNCPGIIAP 590
PN GI+ P
Sbjct: 122 PNSQGILTP 130
>UniRef50_P53400 Cluster: Succinyl-CoA ligase [GDP-forming] subunit
alpha-2, mitochondrial precursor; n=34; cellular
organisms|Rep: Succinyl-CoA ligase [GDP-forming] subunit
alpha-2, mitochondrial precursor - Trichomonas vaginalis
Length = 309
Score = 127 bits (307), Expect = 2e-28
Identities = 60/129 (46%), Positives = 83/129 (64%)
Frame = +3
Query: 204 LILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKA 383
L + +T+V++QG G QG +HS+ +YGTKVVG V PKKAG G P+F +KE
Sbjct: 15 LFIDKDTRVVIQGI-GNQGQYHSRLMREYGTKVVGAVHPKKAGKIIAGLPIFKNMKEVVK 73
Query: 384 GTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVG 563
T A AS+I+VP PG M L+VCITE +PQHDM++VK ++++ +L+G
Sbjct: 74 RTDANASLIFVPAPGAAAACIEAAEAGMGLVVCITEHIPQHDMIKVK-KVMKETGCQLIG 132
Query: 564 PNCPGIIAP 590
PNCPG+I P
Sbjct: 133 PNCPGLIQP 141
>UniRef50_A2QQL8 Cluster: Contig An08c0100, complete genome; n=3;
Pezizomycotina|Rep: Contig An08c0100, complete genome -
Aspergillus niger
Length = 355
Score = 123 bits (297), Expect = 3e-27
Identities = 62/135 (45%), Positives = 86/135 (63%)
Frame = +3
Query: 183 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 362
YA+T NL + + T+V+ QGFTG+Q T + +++L++GTK+VGGV P G EHLG PVF
Sbjct: 35 YADTLPNLKIGAHTRVLFQGFTGRQATANVKESLEWGTKIVGGVKPGVEG-EHLGLPVFP 93
Query: 363 TVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQ 542
+VK A+ AS IYVP +PL+V + E VP HD++R+ L Q
Sbjct: 94 SVKAAQERAKPDASAIYVPGNQTAKAIEEAIEAEIPLVVAVAEHVPIHDILRIHSMLKTQ 153
Query: 543 NKSRLVGPNCPGIIA 587
+K+RLVG NCPGII+
Sbjct: 154 SKTRLVGANCPGIIS 168
>UniRef50_Q2U2T2 Cluster: Succinyl-CoA synthetase; n=10;
Ascomycota|Rep: Succinyl-CoA synthetase - Aspergillus
oryzae
Length = 688
Score = 122 bits (293), Expect = 8e-27
Identities = 62/135 (45%), Positives = 85/135 (62%)
Frame = +3
Query: 183 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 362
YA+T NL + + T+V+ QGFTG+Q T + +++L +GTK+VGGV P G EHLG PVF
Sbjct: 36 YADTLPNLKIGAHTRVLFQGFTGRQATANVKESLAWGTKIVGGVKPGVEG-EHLGLPVFP 94
Query: 363 TVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQ 542
+VK A+ AS IYVP +PL+V + E VP HD++R+ L Q
Sbjct: 95 SVKAAQEKAKPDASAIYVPGNQTAKAIEEAIEAEIPLVVAVAEHVPIHDVLRIHSMLQTQ 154
Query: 543 NKSRLVGPNCPGIIA 587
+K+RLVG NCPGII+
Sbjct: 155 SKTRLVGANCPGIIS 169
>UniRef50_Q4PDB0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 357
Score = 120 bits (289), Expect = 3e-26
Identities = 64/138 (46%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Frame = +3
Query: 183 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHL-GKPVF 359
Y+ T NL + VIVQGFTGK T H+Q +LD GT VVGGV+P K G++HL G+PVF
Sbjct: 42 YSNTIPNLAAGPHSNVIVQGFTGKASTVHTQISLDMGTNVVGGVAPGKGGSKHLGGRPVF 101
Query: 360 GTVKEA-KAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALL 536
++K+ AG A+ ++VPP +PLIV + EGVP D RV AL
Sbjct: 102 NSIKQVLDAGIRVDATSVFVPPALAADAIIEAINAEIPLIVSVAEGVPVKDQFRVMEALH 161
Query: 537 RQNKSRLVGPNCPGIIAP 590
Q+KSRL+G N PG P
Sbjct: 162 SQSKSRLLGANSPGFCNP 179
>UniRef50_Q8A9M8 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=4; Bacteria|Rep: Succinyl-CoA ligase
[ADP-forming] subunit alpha - Bacteroides
thetaiotaomicron
Length = 286
Score = 118 bits (285), Expect = 8e-26
Identities = 57/130 (43%), Positives = 79/130 (60%)
Frame = +3
Query: 201 NLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAK 380
++++ T++IVQG TG+ G FH+++ +YGT VVGG SP K GTE G PVF T+ EA
Sbjct: 2 SILIDKSTRLIVQGITGRDGLFHAKKMKEYGTNVVGGTSPGKGGTEVDGIPVFNTMHEAV 61
Query: 381 AGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLV 560
T A S+I+VP + LIVCI EG+P D+++ H Q + LV
Sbjct: 62 KQTQANTSIIFVPARFAADTIMEAADAGIRLIVCIAEGIPTLDVIKA-HRFAEQRGAMLV 120
Query: 561 GPNCPGIIAP 590
GPNCPG+I+P
Sbjct: 121 GPNCPGLISP 130
>UniRef50_Q9YD40 Cluster: Succinyl-CoA synthetase alpha chain; n=4;
cellular organisms|Rep: Succinyl-CoA synthetase alpha
chain - Aeropyrum pernix
Length = 292
Score = 117 bits (282), Expect = 2e-25
Identities = 59/131 (45%), Positives = 85/131 (64%), Gaps = 2/131 (1%)
Frame = +3
Query: 204 LILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKA 383
+++ SET+V+VQG TG++G+FH++ L+YGTKVV GV+P K G+E G PV+ +VKEA A
Sbjct: 3 VLVDSETRVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKGGSEVHGVPVYDSVKEALA 62
Query: 384 -GTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVR-VKHALLRQNKSRL 557
S+++VP P + L+V ITEG+P HD +R V +A RQ + +
Sbjct: 63 EHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYA--RQKGATI 120
Query: 558 VGPNCPGIIAP 590
+GPNCPG I P
Sbjct: 121 IGPNCPGAITP 131
>UniRef50_Q58643 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=95; cellular organisms|Rep: Succinyl-CoA ligase
[ADP-forming] subunit alpha - Methanococcus jannaschii
Length = 294
Score = 113 bits (273), Expect = 2e-24
Identities = 62/132 (46%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +3
Query: 198 KNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEA 377
K ++L TK IVQG TG+QG+FH+++ L+ GTK+VGGV+P K G G PVF TVKEA
Sbjct: 6 KMILLDENTKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQNVHGVPVFDTVKEA 65
Query: 378 KAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHD-MVRVKHALLRQNKSR 554
T A ASVI+VP P + LIV ITE +P HD M V +A +
Sbjct: 66 VKETDANASVIFVPAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYA--EDVGVK 123
Query: 555 LVGPNCPGIIAP 590
++GPN PGI +P
Sbjct: 124 IIGPNTPGIASP 135
>UniRef50_O26663 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=13; cellular organisms|Rep: Succinyl-CoA ligase
[ADP-forming] subunit alpha - Methanobacterium
thermoautotrophicum
Length = 293
Score = 111 bits (267), Expect = 1e-23
Identities = 53/129 (41%), Positives = 79/129 (61%)
Frame = +3
Query: 204 LILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKA 383
++L +T+ +VQG TGKQG+FH++Q L+YGT++V GV+P K G E LG V+ +V+E
Sbjct: 7 ILLDEDTRCLVQGITGKQGSFHTRQMLEYGTRIVAGVTPGKGGQEFLGVDVYNSVEEVTE 66
Query: 384 GTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVG 563
AS+I+VP P + L+V ITE +P HD +++ R K+ ++G
Sbjct: 67 EMDVNASIIFVPAP-FAKDAAFESIKHLDLVVIITEHIPVHDSMQIMEYASRMGKT-VIG 124
Query: 564 PNCPGIIAP 590
PN PGII P
Sbjct: 125 PNTPGIITP 133
>UniRef50_Q7U0Z0 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=32; Actinobacteria (class)|Rep: Succinyl-CoA
ligase [ADP-forming] subunit alpha - Mycobacterium bovis
Length = 303
Score = 110 bits (265), Expect = 2e-23
Identities = 61/143 (42%), Positives = 84/143 (58%), Gaps = 10/143 (6%)
Frame = +3
Query: 192 TRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGT--EHLGK----- 350
T ++ L+ + KVIVQG TG + T H+ + L GT++VGGV+ +KAGT H K
Sbjct: 2 THMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLI 61
Query: 351 --PVFGTVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRV- 521
PVFG+V EA TGA S+I+VPP +PL+V ITEG+P D
Sbjct: 62 KLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAW 121
Query: 522 KHALLRQNKSRLVGPNCPGIIAP 590
+ L +K+R++GPNCPGII+P
Sbjct: 122 AYNLEAGHKTRIIGPNCPGIISP 144
>UniRef50_Q18XG5 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=2; Desulfitobacterium hafniense|Rep:
Succinyl-CoA ligase [ADP-forming] subunit alpha -
Desulfitobacterium hafniense (strain DCB-2)
Length = 293
Score = 107 bits (258), Expect = 1e-22
Identities = 56/127 (44%), Positives = 79/127 (62%)
Frame = +3
Query: 204 LILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKA 383
LI+ +T VIVQG TGKQG++H + L+YGTKVV GV+P + G + G PV+ TV+EAK
Sbjct: 3 LIINKDTHVIVQGGTGKQGSYHVKAMLEYGTKVVAGVTPGRGGNQVGGLPVYDTVREAKE 62
Query: 384 GTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVG 563
AS+I VP P +PLIV +TE +P D +++ +AL ++ RL+G
Sbjct: 63 RHKIDASLIMVPAPFVLSAAIEAIDAGVPLIVIVTEHIPVKDTMKI-NALAQEKGCRLLG 121
Query: 564 PNCPGII 584
PN G+I
Sbjct: 122 PNTIGVI 128
>UniRef50_Q07LP7 Cluster: Succinyl-CoA synthetase, alpha subunit;
n=2; Rhodopseudomonas palustris BisA53|Rep: Succinyl-CoA
synthetase, alpha subunit - Rhodopseudomonas palustris
(strain BisA53)
Length = 306
Score = 107 bits (258), Expect = 1e-22
Identities = 51/129 (39%), Positives = 79/129 (61%)
Frame = +3
Query: 204 LILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKA 383
+IL E +V+VQG TGKQG+F +++ GT++V GV+PK+AG HLG PV+ + + A A
Sbjct: 2 IILRKEHRVLVQGITGKQGSFWTEKMRSVGTRIVAGVNPKRAGETHLGIPVYASARAAMA 61
Query: 384 GTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVG 563
T +V+++PP L+V +TE +P HD + V HA R+N +R++G
Sbjct: 62 ETPFDVAVMFIPPALAEEAALDAIEAGAQLLVVLTEHIPIHDQM-VIHAAARRNGTRILG 120
Query: 564 PNCPGIIAP 590
PN G++ P
Sbjct: 121 PNTAGLVTP 129
>UniRef50_Q2V0P6 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=10; cellular organisms|Rep: Succinyl-CoA ligase
[ADP-forming] subunit alpha - Pelotomaculum
thermopropionicum
Length = 290
Score = 103 bits (246), Expect = 4e-21
Identities = 50/126 (39%), Positives = 76/126 (60%)
Frame = +3
Query: 204 LILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKA 383
+I+ T+V+VQG TG QG FH++Q L YGTK+V GV+P K G G PV+ +V+EA
Sbjct: 3 IIIDENTQVLVQGITGNQGVFHTRQMLAYGTKIVAGVTPGKGGATVEGIPVYNSVREACE 62
Query: 384 GTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVG 563
ASV+++P P +P++V +TEGVP HD +++ A ++ + ++G
Sbjct: 63 NHRIDASVLFIPAPFTKDAAFESLEAGVPVVVIVTEGVPVHDEIQIV-AFAKRKGAIVLG 121
Query: 564 PNCPGI 581
PN GI
Sbjct: 122 PNTFGI 127
>UniRef50_UPI000023DDE4 Cluster: hypothetical protein FG07898.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG07898.1 - Gibberella zeae PH-1
Length = 320
Score = 95.9 bits (228), Expect = 6e-19
Identities = 48/112 (42%), Positives = 65/112 (58%)
Frame = +3
Query: 255 QGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGXX 434
+ T ++Q + YGTKVVGGV+ HLG P+FG++++A S +++
Sbjct: 9 KATKNAQDTIAYGTKVVGGVTKGPKVDTHLGLPLFGSMEKAAEELNPDVSAVFIRGSLAA 68
Query: 435 XXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGIIAP 590
+PLIV + E VP HDM+RV L Q+KSRLVGPNCPGIIAP
Sbjct: 69 DAIIEAIKVEIPLIVSVAEHVPVHDMLRVHEVLRTQSKSRLVGPNCPGIIAP 120
>UniRef50_A7I683 Cluster: Succinyl-CoA synthetase, alpha subunit;
n=1; Candidatus Methanoregula boonei 6A8|Rep:
Succinyl-CoA synthetase, alpha subunit - Methanoregula
boonei (strain 6A8)
Length = 292
Score = 93.1 bits (221), Expect = 4e-18
Identities = 53/129 (41%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Frame = +3
Query: 219 ETKVIVQGFTGKQGTFHSQQALDY-----GTKVVGGVSPKKAGTEHLGKPVFGTVKEAKA 383
+T +IV G TGKQG +H +Y G VV GV+PKKAG G PV+ TVK+A
Sbjct: 7 KTGIIVTGATGKQGDYHIGLMNEYARQVGGRGVVAGVTPKKAGQSVHGVPVYDTVKDALK 66
Query: 384 GTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVG 563
ATASVI+VP + L V ITE +P HD ++ A R++G
Sbjct: 67 EHDATASVIFVPAKAAGDSIMEVADAGLELAVVITEHIPVHDTMKA-IAYAEMEGCRVIG 125
Query: 564 PNCPGIIAP 590
PNCPG+++P
Sbjct: 126 PNCPGLLSP 134
>UniRef50_Q7SDJ1 Cluster: Putative uncharacterized protein
NCU09810.1; n=2; Sordariales|Rep: Putative
uncharacterized protein NCU09810.1 - Neurospora crassa
Length = 646
Score = 90.6 bits (215), Expect = 2e-17
Identities = 48/111 (43%), Positives = 66/111 (59%)
Frame = +3
Query: 255 QGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGXX 434
Q T +++ +L +GTK+VGGV P + G EHLG PV +V++A A+ IYV
Sbjct: 29 QATANAKDSLAWGTKIVGGVIPGRTG-EHLGLPVLPSVRQAMEYLKPDATGIYVAAHQAP 87
Query: 435 XXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGIIA 587
+PLIV + E +P HDM+R+ L Q+KSRLVGPN PGII+
Sbjct: 88 GAIEEAIEAEVPLIVAVAEHIPVHDMLRIHSMLKTQSKSRLVGPNSPGIIS 138
>UniRef50_Q18UM7 Cluster: CoA-binding; n=2; Desulfitobacterium
hafniense|Rep: CoA-binding - Desulfitobacterium
hafniense (strain DCB-2)
Length = 292
Score = 87.8 bits (208), Expect = 2e-16
Identities = 44/129 (34%), Positives = 75/129 (58%)
Frame = +3
Query: 201 NLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAK 380
++I+ T V++QG TGK+G+F ++ A +YGT +V GV+P K G + G PV+ TV+ A
Sbjct: 2 SIIIDHTTPVLIQGITGKEGSFWAKHAKNYGTHIVAGVTPGKEGQDVDGIPVYHTVRRAV 61
Query: 381 AGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLV 560
AS++ VPP + +IV EG+P H+M++++ L + ++ ++
Sbjct: 62 QEHPIEASLLVVPPKAAKGAVLEALDSGIKVIVVTAEGIPLHEMMQLRKIAL-EKQAMVI 120
Query: 561 GPNCPGIIA 587
G N GII+
Sbjct: 121 GGNTTGIIS 129
>UniRef50_Q6LYN5 Cluster: Succinate--CoA ligase (ADP-forming); alpha
subunit; n=8; cellular organisms|Rep: Succinate--CoA
ligase (ADP-forming); alpha subunit - Methanococcus
maripaludis
Length = 288
Score = 87.4 bits (207), Expect = 2e-16
Identities = 44/129 (34%), Positives = 70/129 (54%)
Frame = +3
Query: 204 LILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKA 383
++L T+ IVQG TG QG FH++ L+ T ++ GV+P K G + G PV+ TV E
Sbjct: 3 ILLDENTRAIVQGITGNQGRFHTKNMLECKTNLLAGVTPGKGGQDVYGVPVYDTVLETVE 62
Query: 384 GTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVG 563
A AS+I++P P + L+ ITE +P D + + A +++ ++G
Sbjct: 63 KYDANASLIFIPAPFVKDAAYEAIDAGVELVTIITEHIPIQDSMDIV-AYGKKHGVNIIG 121
Query: 564 PNCPGIIAP 590
PN PG+ +P
Sbjct: 122 PNTPGLASP 130
>UniRef50_Q2RLF6 Cluster: CoA-binding; n=3; Clostridia|Rep:
CoA-binding - Moorella thermoacetica (strain ATCC 39073)
Length = 298
Score = 85.0 bits (201), Expect = 1e-15
Identities = 50/130 (38%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Frame = +3
Query: 204 LILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKA 383
+++ T V+VQG TG++G+ + +YGTKVV G SP K G G PV+ TVKEA A
Sbjct: 3 ILIDRNTTVVVQGITGREGSLRAAYMKEYGTKVVAGTSPGKGGQTVAGIPVYHTVKEAVA 62
Query: 384 GTG-ATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLV 560
G SVI+VP + IV E VP HD++ + A + +RL+
Sbjct: 63 EHGPIDFSVIFVPGRALKVAVKEAADAGIKNIVPCVESVPIHDIMEMV-AYCKMKGTRLI 121
Query: 561 GPNCPGIIAP 590
GP GII P
Sbjct: 122 GPGSIGIITP 131
>UniRef50_A7HMU3 Cluster: CoA-binding domain protein; n=2;
Thermotogaceae|Rep: CoA-binding domain protein -
Fervidobacterium nodosum Rt17-B1
Length = 285
Score = 82.2 bits (194), Expect = 8e-15
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Frame = +3
Query: 216 SETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKE-AKAGTG 392
S KV V G TG+ G++H+++ ++YGT +V GVS E PV+ T+ + G
Sbjct: 4 SNEKVCVYGITGRYGSYHTKKMIEYGTDIVCGVSKNNEFKEVHNVPVYNTLSDYVSRGFN 63
Query: 393 ATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVGPNC 572
++ +VP P + V ITE VP HD +R+ ++++N +VGPNC
Sbjct: 64 VDTAIFFVPAPYVMEAFLDAFNNGVKKFVVITEHVPIHDALRMVD-IVKKNNLTMVGPNC 122
Query: 573 PGII 584
PG+I
Sbjct: 123 PGVI 126
>UniRef50_A7DNB4 Cluster: CoA-binding domain protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep:
CoA-binding domain protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 305
Score = 82.2 bits (194), Expect = 8e-15
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Frame = +3
Query: 228 VIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGK-PVFGTVKEAKAGTGATAS 404
VIVQG TG G+ H++ + YGT VV GV+P K G + K P++ +++EA T A S
Sbjct: 22 VIVQGITGAYGSLHARNMIAYGTNVVAGVTPGKGGQKFDDKVPIYNSMQEAVDATNAKIS 81
Query: 405 VIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGII 584
+++VP + L+V I E VP D + L +Q + ++GPN PGI+
Sbjct: 82 IVFVPAKFFLSAAKDALEAGIKLLVAIPEHVPVRDTMETLE-LAKQKGAVVIGPNTPGIM 140
Query: 585 AP 590
P
Sbjct: 141 IP 142
>UniRef50_A0RTT7 Cluster: Succinyl-CoA synthetase, alpha subunit;
n=1; Cenarchaeum symbiosum|Rep: Succinyl-CoA synthetase,
alpha subunit - Cenarchaeum symbiosum
Length = 304
Score = 81.0 bits (191), Expect = 2e-14
Identities = 41/121 (33%), Positives = 65/121 (53%)
Frame = +3
Query: 228 VIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASV 407
V+VQG TGK G+ H++ +YGT + GV+ ++ + G P++G + EA TGA S
Sbjct: 22 VVVQGITGKFGSTHTRLMKEYGTNIAAGVTLREGAKDFEGIPLYGNIGEAVEATGAQISA 81
Query: 408 IYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGIIA 587
++VP + L+V I E VP D + + L R+ + ++GPN PG+I
Sbjct: 82 MFVPAKFFLSAAKDALEAGIKLLVAIPEHVPVRDTLELLE-LARKKDAIVIGPNTPGVII 140
Query: 588 P 590
P
Sbjct: 141 P 141
>UniRef50_O67729 Cluster: Succinyl-CoA ligase alpha subunit; n=4;
Bacteria|Rep: Succinyl-CoA ligase alpha subunit -
Aquifex aeolicus
Length = 368
Score = 68.1 bits (159), Expect = 1e-10
Identities = 46/132 (34%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Frame = +3
Query: 210 LTSETKVIVQGFTGKQGT--FHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKA 383
L +T++IV G TG++ + +AL Y + GV+P K GTE G PVF TVKEA +
Sbjct: 32 LNDKTRIIVVGITGREASQVVTESEAL-YPGFIKVGVTPGKGGTEVAGVPVFNTVKEALS 90
Query: 384 ---GTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSR 554
G ++YVPP + LI +TE VP D V H ++
Sbjct: 91 SPEGKDVNTGLVYVPPASVKDAVIELIDAGIKLIYIVTEHVPIRDTVYFYH-YAKERGVT 149
Query: 555 LVGPNCPGIIAP 590
+VGP G I P
Sbjct: 150 IVGPTSLGCIVP 161
>UniRef50_Q8YQC0 Cluster: Succinyl-CoA synthetase alpha chain; n=6;
Cyanobacteria|Rep: Succinyl-CoA synthetase alpha chain -
Anabaena sp. (strain PCC 7120)
Length = 293
Score = 66.9 bits (156), Expect = 3e-10
Identities = 45/128 (35%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Frame = +3
Query: 210 LTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGT 389
LT ++KVI+QGF H Q YGT +V GV P G E PVF V+E
Sbjct: 3 LTPDSKVIIQGFHEFISENHIAQMKAYGTNLVAGVQPGYGGQELYHLPVFDLVEEVVGQF 62
Query: 390 GA-TASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVGP 566
G+ ++I V P + I+ I+ GVP DMV + ++ +VGP
Sbjct: 63 GSIDTTIICVHPYQVLDAALEAIASHIRQIIIISAGVPPLDMVELLRK-AEAGETLVVGP 121
Query: 567 NCPGIIAP 590
N PGII P
Sbjct: 122 NSPGIIVP 129
>UniRef50_Q05FP1 Cluster: Succinyl-CoA synthetase alpha subunit;
n=1; Candidatus Carsonella ruddii PV|Rep: Succinyl-CoA
synthetase alpha subunit - Carsonella ruddii (strain PV)
Length = 274
Score = 66.1 bits (154), Expect = 6e-10
Identities = 33/121 (27%), Positives = 62/121 (51%)
Frame = +3
Query: 228 VIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASV 407
++ G TGK G H++ ++++GTK+ G++ K G P++ + +A SV
Sbjct: 6 ILSYGITGKFGFQHTKVSINFGTKIKCGINNSKNGGIVFHIPIYSSAIKAVKSNNCKISV 65
Query: 408 IYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGIIA 587
+Y+P + +I+CITE + D++++K+ + K +GPN PG+I
Sbjct: 66 LYIPYFVCKKTILENIYSGIKIIICITENISVFDILKIKY-YCEKYKIIFIGPNSPGLIL 124
Query: 588 P 590
P
Sbjct: 125 P 125
>UniRef50_P74286 Cluster: Succinyl-CoA synthetase; n=3;
Chroococcales|Rep: Succinyl-CoA synthetase -
Synechocystis sp. (strain PCC 6803)
Length = 302
Score = 46.4 bits (105), Expect = 5e-04
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Frame = +3
Query: 219 ETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGK-PVFGTVKEAKAGTG- 392
E+KV++QG G + +Q GTK+V GVSP G E +G PVF V A G
Sbjct: 6 ESKVLLQGVHHPLGLTYLEQMRSCGTKLVAGVSPGHGG-ELIGDLPVFDLVDLAVKTVGP 64
Query: 393 ATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVGPNC 572
S+I PP + +V ++ GVP DM+ + + + ++G
Sbjct: 65 VDISLILNPPYRVLDAALEAIAAGIRQLVIVSAGVPPLDMITLLRE-AQATHTLILGSGS 123
Query: 573 PGIIAP 590
GI+ P
Sbjct: 124 QGIMIP 129
>UniRef50_A7ENF5 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 580
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/76 (34%), Positives = 41/76 (53%)
Frame = +3
Query: 267 HSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGXXXXXX 446
++++++++GT +VGGV+P K G EHLG PV TVKE + + + ++ PG
Sbjct: 4 NAKESIEWGTNIVGGVTPGKNG-EHLGLPVLPTVKE--ENSQSKSRLVGANTPGIISAIG 60
Query: 447 XXXXXXMPLIVCITEG 494
PL C T G
Sbjct: 61 KCRIGFQPL-SCFTPG 75
>UniRef50_A5P1R6 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium sp. 4-46|Rep: Putative uncharacterized
protein - Methylobacterium sp. 4-46
Length = 463
Score = 39.9 bits (89), Expect = 0.044
Identities = 28/119 (23%), Positives = 57/119 (47%)
Frame = -3
Query: 584 NDTRTVRTNQSRLVLSQEGMFYSHHIMLWHTFCNAHNEGHFSLNSF*NGCCSSRGRYINN 405
+D VR +++RL Q G + HH+ + +A +E L+ + +R R++++
Sbjct: 214 DDAGAVRADEARLRALQ-GPLHPHHVEDGNALGDADDERDLGLDRLADRVRGARRRHVDD 272
Query: 404 RGSCSCACLCLFDCTKHRLTKMFCTSLLW*HSSNNFSTIVKGLLAVEGTLLSSETLNNH 228
RG + L D + R +M + ++++ + LL +EG +L+ E L +H
Sbjct: 273 RGVGAGRLARLLDRVEDRQPEMGRAAFAGAGAADHLGAVGDRLLGMEGAVLAGEALADH 331
>UniRef50_Q968N3 Cluster: Succinyl CoA synthetase alpha subunit;
n=1; Tritrichomonas foetus|Rep: Succinyl CoA synthetase
alpha subunit - Tritrichomonas foetus (Trichomonas
foetus)
Length = 46
Score = 39.1 bits (87), Expect = 0.076
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +3
Query: 204 LILTSETKVIVQGFTGKQGTFHSQQALDYGTKV 302
L L+ +TKV++QG GKQG FH + +YGT V
Sbjct: 15 LFLSKDTKVVIQGI-GKQGQFHGRLMAEYGTNV 46
>UniRef50_A0LDT0 Cluster: CoA-binding domain protein; n=4;
Proteobacteria|Rep: CoA-binding domain protein -
Magnetococcus sp. (strain MC-1)
Length = 916
Score = 38.3 bits (85), Expect = 0.13
Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 8/131 (6%)
Frame = +3
Query: 213 TSETKVIVQGFTGKQGTFHSQQALDY-GTKVVGGVSPKKAG----TEHLGKPVFGTVKEA 377
T E +V V G + + + Y G +V G P ++G T PV+ V EA
Sbjct: 38 TKEDRVCVLNILGGESKSVTPISHAYSGGNIVCGTQPGRSGSTLKTPAGDIPVYSNVLEA 97
Query: 378 -KAGTGATASVIYVPPPGXXXXXXXXXXXXMPL--IVCITEGVPQHDMVRVKHALLRQNK 548
+AG A+V+YVPP G L +V +TE V D R+ A +
Sbjct: 98 VEAGHVFNAAVVYVPPSGVKDAVIEAVRVSPNLKKVVILTEKVAVKD-ARIIRAYCQMRG 156
Query: 549 SRLVGPNCPGI 581
++G NC G+
Sbjct: 157 VDVLGANCLGV 167
>UniRef50_A5C1W8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 325
Score = 37.5 bits (83), Expect = 0.23
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +3
Query: 474 IVCITEGVPQHDMVRVKHALLRQN 545
IVCITE +PQHDM RVK AL Q+
Sbjct: 297 IVCITERIPQHDMDRVKAALYGQS 320
>UniRef50_Q8EVW2 Cluster: Transcriptional antiterminator BglG
family; n=1; Mycoplasma penetrans|Rep: Transcriptional
antiterminator BglG family - Mycoplasma penetrans
Length = 642
Score = 36.7 bits (81), Expect = 0.41
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Frame = -3
Query: 419 RYINNRGSCSCACLCLFDCTKHRLTKMFCTSLLW*HSSNNFSTIV--KGLLAVEGTL--L 252
RY+ S S L + K R+ ++ L + NNF+ IV KG +++ ++ L
Sbjct: 11 RYLIEHNSASINELTNYLNIKSRMVYLYINELNYLLKKNNFNEIVVKKGYVSLNLSIEQL 70
Query: 251 SSETLNNHFCFTCKDQI-FSGFSIRVAGCKSYIAEF*SIFELRKN 120
+ LNN++ F+ ++I F F I V G K + ++ ++F + KN
Sbjct: 71 NFLILNNYYSFSQDERIDFICFDIIVFGNKRTLEDYANLFIISKN 115
>UniRef50_A1FZP5 Cluster: Putative uncharacterized protein; n=2;
Proteobacteria|Rep: Putative uncharacterized protein -
Stenotrophomonas maltophilia R551-3
Length = 477
Score = 36.3 bits (80), Expect = 0.54
Identities = 27/120 (22%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Frame = -3
Query: 584 NDTRTVRTNQSRLVL-SQEGMFYSHHIMLWHTFCNAHNEGHFSLNSF*NGCCSSRGRYIN 408
+D R VR +Q + + + + + + H+ F +A ++ + F + R R+++
Sbjct: 203 DDARAVRPDQHGVRMRTGQHVLDAQHVQHRDAFGDADDDLDAGSSGFQDRVSRVRRRHVD 262
Query: 407 NRGSCSCACLCLFDCTKHRLTKMFCTSLLW*HSSNNFSTIVKGLLAVEGTLLSSETLNNH 228
+R + A + + + R + +L H++NN ++ L VEG LL+ E L++H
Sbjct: 263 DRSVGAGALHGVGNGVEDRQVDVGGATLARGHAANNLGAVLDHLSGVEGALLAGEALHDH 322
>UniRef50_UPI00006CB349 Cluster: EGF-like domain containing protein;
n=1; Tetrahymena thermophila SB210|Rep: EGF-like domain
containing protein - Tetrahymena thermophila SB210
Length = 3139
Score = 34.7 bits (76), Expect = 1.6
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 10/106 (9%)
Frame = -3
Query: 443 NGCCSSRGRYINNRGSCS-CACLCL----FDCTKHRL--TKMFCTSLLW*HSSNNFSTIV 285
NG C + NN GSCS CA CL C ++ T CT + ++ + +
Sbjct: 713 NGICQCVSGFYNNSGSCSPCAANCLTCDHTGCLTYKCDPTCKTCTGSNNNNCTDCYQSQN 772
Query: 284 KGLLAVEGT---LLSSETLNNHFCFTCKDQIFSGFSIRVAGCKSYI 156
+ L A GT + S+ + N+ C C FS + C+S I
Sbjct: 773 RKLNAATGTCDCVTSTYLVQNYICLLCHPSCFSCTGPQANQCQSCI 818
>UniRef50_UPI00006A20BC Cluster: UPI00006A20BC related cluster; n=2;
Xenopus tropicalis|Rep: UPI00006A20BC UniRef100 entry -
Xenopus tropicalis
Length = 748
Score = 34.3 bits (75), Expect = 2.2
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1
Query: 346 PRCSVPAFFGDTPPTTLVP*SRACWLWKVP 257
PR VPA GD T+ VP +R LW+VP
Sbjct: 62 PRTKVPAILGDPLSTSSVPMARVLGLWRVP 91
>UniRef50_A4ALC7 Cluster: Putative uncharacterized protein; n=5;
Bacteria|Rep: Putative uncharacterized protein - marine
actinobacterium PHSC20C1
Length = 246
Score = 33.9 bits (74), Expect = 2.9
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 213 TSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKK-AGTEHLG 347
T +V + G +GK G + + AL++G +VVG PK A +H G
Sbjct: 13 TPRQRVCIVGISGKLGQYLAAHALEHGYEVVGVCRPKSVAKLDHFG 58
>UniRef50_UPI0000D5572D Cluster: PREDICTED: similar to CG6493-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG6493-PA - Tribolium castaneum
Length = 1623
Score = 33.1 bits (72), Expect = 5.0
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +3
Query: 60 LVFPFRRFTFN--NSTMAMPVRVLSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVI 233
LVF RRFT + + +V KF +K V NPY +TR+NL +T + + +
Sbjct: 379 LVFTKRRFTAKVLHHIIDKASQVDPKFYH-IKSNFVVGNKNNPYNDTRENLYITKKNREV 437
Query: 234 VQGFTGKQ-GTFHSQQALDYGTKV 302
+ F K+ S L+ G +
Sbjct: 438 LNSFVSKEINVLVSSNVLEEGVDI 461
>UniRef50_A7CFE5 Cluster: Putative uncharacterized protein; n=2;
Ralstonia pickettii|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12D
Length = 376
Score = 33.1 bits (72), Expect = 5.0
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -3
Query: 584 NDTRTVRTNQSRLVLSQEGMFYSHHIMLWH-TFCNAHNEGHFSLNSF*NGCCSSRGRYIN 408
+ R VRT Q RL S + HH + F +A +E F +SF + + GR+++
Sbjct: 194 DQARAVRTQQQRLAASLTHLVLDHHHVAHRDAFGDADHEVQFGFDSFPDCVSGACGRHVD 253
Query: 407 NR 402
+R
Sbjct: 254 HR 255
>UniRef50_A0QKT7 Cluster: Ftsk/spoiiie family protein; n=2;
Mycobacterium avium|Rep: Ftsk/spoiiie family protein -
Mycobacterium avium (strain 104)
Length = 1197
Score = 32.7 bits (71), Expect = 6.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 288 YGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPG 428
+GT+VVG VS G+ + V + AG G A +++PP G
Sbjct: 646 FGTRVVGPVSRPVEAAHPSGRSISAAVLDRLAGHGPAAHRVWLPPLG 692
>UniRef50_Q6BG85 Cluster: Extracellular matrix-like protein, putative;
n=3; cellular organisms|Rep: Extracellular matrix-like
protein, putative - Paramecium tetraurelia
Length = 3622
Score = 32.7 bits (71), Expect = 6.6
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Frame = -3
Query: 497 HTFCNAHNEGHFSLNSF*NGCCSSR-GRYINNRGSCSCACLCLFDCTKHRLTKMFCTSLL 321
+T C + NSF GC + G Y+N+ G C CL +++ KH ++ CT+
Sbjct: 1871 NTECFNCSNNCLECNSF--GCIKCKVGSYLND-GICDSLCLIMYNDIKHECVEL-CTNQE 1926
Query: 320 W*HSSNNFSTIVKGLLAVEGTLLSS---ETLN-NHFCFTCKDQ 204
+ + + +S + L +T+ N+FCF C ++
Sbjct: 1927 YQYLDHCYSQCPNDTYEYQQNCLLDCPIKTVQYNNFCFDCPER 1969
>UniRef50_Q6MCJ7 Cluster: Putative uncharacterized protein; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative uncharacterized protein - Protochlamydia
amoebophila (strain UWE25)
Length = 147
Score = 32.3 bits (70), Expect = 8.7
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 488 CNAHNEGHFSLNSF*NGCC--SSRGRYINNRGSCSCACLCLFDC 363
C H+ + S +S +GCC SS G + SCSC+C C C
Sbjct: 8 CGTHHHHYHSDHSS-HGCCESSSCGSHSYCGNSCSCSCGCQSSC 50
>UniRef50_Q6F106 Cluster: Putative uncharacterized protein; n=1;
Mesoplasma florum|Rep: Putative uncharacterized protein
- Mesoplasma florum (Acholeplasma florum)
Length = 673
Score = 32.3 bits (70), Expect = 8.7
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -3
Query: 299 FSTIVKGLLAVEGTLLSSETLNNHFCFTCKDQIFSGFSIRVAG 171
FSTIV +A TLL +E NN F KD + S + AG
Sbjct: 58 FSTIVSSPMATRSTLLDTEASNNGLIFFQKDNLKSIYDQASAG 100
>UniRef50_Q6D7M5 Cluster: Penicillin-binding protein 5; n=72;
Proteobacteria|Rep: Penicillin-binding protein 5 -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 403
Score = 32.3 bits (70), Expect = 8.7
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Frame = +3
Query: 75 RRFTFNNSTMAMPVRVL---SKFKDGLKLGNVRFASGNPYAE-TRKNLILTSETKVIVQG 242
+ FTFNN +L S DG+K G+ A N A T + L S ++ G
Sbjct: 215 KEFTFNNIRQPNRNGLLWDSSLNVDGIKTGHTSSAGFNLVASATEGQMRLIS---AVLGG 271
Query: 243 FTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVF 359
K S++ L +G + V+P KAG E +PV+
Sbjct: 272 RNAKGRESESKKLLTWGFRFFETVAPLKAGKEFASEPVW 310
>UniRef50_A7IQG8 Cluster: CoA-binding domain protein; n=1;
Xanthobacter autotrophicus Py2|Rep: CoA-binding domain
protein - Xanthobacter sp. (strain Py2)
Length = 727
Score = 32.3 bits (70), Expect = 8.7
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Frame = +3
Query: 288 YGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXM 467
+G +V+ V PK TE L +P + + G +VI PP +
Sbjct: 61 FGGEVIA-VHPKL--TEILDRPAYANLSAVPGGVDL--AVIVAPPGEIPAIMVDCAAARV 115
Query: 468 PLIVCITEGVPQH-DMVRVKH----ALLRQNKSRLVGPNCPGIIA 587
P+ + I+ G + D R+ A R RL+GPNC G+I+
Sbjct: 116 PVAIIISGGFAETGDAGRMLEQRIVATARSGGVRLIGPNCFGVIS 160
>UniRef50_A6FTL0 Cluster: Putative uncharacterized protein; n=1;
Roseobacter sp. AzwK-3b|Rep: Putative uncharacterized
protein - Roseobacter sp. AzwK-3b
Length = 322
Score = 32.3 bits (70), Expect = 8.7
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = -1
Query: 292 P*SRACWLWKVPCFPVKP*TITFVSLVRIKFFLVSA*GLPDANRTLPSFSPSLNLERT 119
P + +C W + CF P T+ F +VR+ F S PDAN S+S ++L+RT
Sbjct: 16 PRAYSCRPW-LACFAQAPATLIFDDVVRVYF---SCRPQPDANGHFTSYSSWVDLDRT 69
>UniRef50_Q9V1S3 Cluster: AcdA-1 acetate--coA ligase (ADP-forming)
(EC 6.2.1.13), alpha chain; n=8; Thermococcaceae|Rep:
AcdA-1 acetate--coA ligase (ADP-forming) (EC 6.2.1.13),
alpha chain - Pyrococcus abyssi
Length = 472
Score = 32.3 bits (70), Expect = 8.7
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
Frame = +3
Query: 306 GGVSPKKAGTEHL-GKPVFGTVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVC 482
G + P + + G V+ V E T +VI +P P + ++
Sbjct: 50 GNIYPVNPKLDEIDGYKVYHDVSELPDDTDL--AVIAIPAPAVPETMKKIAEKGIKAVII 107
Query: 483 ITEGVPQ--HDMVRVKHALL---RQNKSRLVGPNCPGIIAP 590
IT G + + R++ +L R N R++GPNC G+ AP
Sbjct: 108 ITGGFGELGEEGKRMEQEILEIARANGIRVIGPNCVGVYAP 148
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,447,148
Number of Sequences: 1657284
Number of extensions: 11852576
Number of successful extensions: 28663
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 27288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28558
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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