Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7o08
(592 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457139-1|CAG33420.1| 333|Homo sapiens SUCLG1 protein. 194 1e-49
BC000504-1|AAH00504.1| 333|Homo sapiens SUCLG1 protein protein. 194 1e-49
AC096770-1|AAY24107.1| 333|Homo sapiens unknown protein. 194 1e-49
AF104921-1|AAD17940.2| 333|Homo sapiens succinyl-CoA synthetase... 193 3e-49
Z68204-1|CAA92426.1| 132|Homo sapiens succinyl coenzyme A synth... 136 7e-32
Z98744-5|CAB11421.1| 226|Homo sapiens histone 1, H1b protein. 30 5.3
X83509-1|CAA58498.1| 226|Homo sapiens Histone H1.5 protein. 30 5.3
BC101583-1|AAI01584.1| 226|Homo sapiens histone cluster 1, H1b ... 30 5.3
BC101581-1|AAI01582.1| 226|Homo sapiens histone cluster 1, H1b ... 30 5.3
BC069101-1|AAH69101.1| 226|Homo sapiens histone cluster 1, H1b ... 30 5.3
AF531304-1|AAN06704.1| 226|Homo sapiens histone H1 protein. 30 5.3
J02960-1|AAA88016.1| 251|Homo sapiens unknown protein protein. 29 9.3
>CR457139-1|CAG33420.1| 333|Homo sapiens SUCLG1 protein.
Length = 333
Score = 194 bits (474), Expect = 1e-49
Identities = 89/136 (65%), Positives = 103/136 (75%)
Frame = +3
Query: 183 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 362
Y +R++L + TK+I QGFTGKQGTFHSQQAL+YGTK+VGG +P K G HLG PVF
Sbjct: 30 YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89
Query: 363 TVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQ 542
TVKEAK TGATASVIYVPPP +PL+VCITEG+PQ DMVRVKH LLRQ
Sbjct: 90 TVKEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQ 149
Query: 543 NKSRLVGPNCPGIIAP 590
K+RL+GPNCPG+I P
Sbjct: 150 EKTRLIGPNCPGVINP 165
>BC000504-1|AAH00504.1| 333|Homo sapiens SUCLG1 protein protein.
Length = 333
Score = 194 bits (474), Expect = 1e-49
Identities = 89/136 (65%), Positives = 103/136 (75%)
Frame = +3
Query: 183 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 362
Y +R++L + TK+I QGFTGKQGTFHSQQAL+YGTK+VGG +P K G HLG PVF
Sbjct: 30 YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89
Query: 363 TVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQ 542
TVKEAK TGATASVIYVPPP +PL+VCITEG+PQ DMVRVKH LLRQ
Sbjct: 90 TVKEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQ 149
Query: 543 NKSRLVGPNCPGIIAP 590
K+RL+GPNCPG+I P
Sbjct: 150 EKTRLIGPNCPGVINP 165
>AC096770-1|AAY24107.1| 333|Homo sapiens unknown protein.
Length = 333
Score = 194 bits (474), Expect = 1e-49
Identities = 89/136 (65%), Positives = 103/136 (75%)
Frame = +3
Query: 183 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 362
Y +R++L + TK+I QGFTGKQGTFHSQQAL+YGTK+VGG +P K G HLG PVF
Sbjct: 30 YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89
Query: 363 TVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQ 542
TVKEAK TGATASVIYVPPP +PL+VCITEG+PQ DMVRVKH LLRQ
Sbjct: 90 TVKEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQ 149
Query: 543 NKSRLVGPNCPGIIAP 590
K+RL+GPNCPG+I P
Sbjct: 150 EKTRLIGPNCPGVINP 165
>AF104921-1|AAD17940.2| 333|Homo sapiens succinyl-CoA synthetase
alpha subunit protein.
Length = 333
Score = 193 bits (471), Expect = 3e-49
Identities = 89/136 (65%), Positives = 102/136 (75%)
Frame = +3
Query: 183 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 362
Y +R++L + TK+I QGFTGKQGTFHSQQAL+YGTK+VGG P K G HLG PVF
Sbjct: 30 YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTLPGKGGQTHLGLPVFN 89
Query: 363 TVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQ 542
TVKEAK TGATASVIYVPPP +PL+VCITEG+PQ DMVRVKH LLRQ
Sbjct: 90 TVKEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQ 149
Query: 543 NKSRLVGPNCPGIIAP 590
K+RL+GPNCPG+I P
Sbjct: 150 EKTRLIGPNCPGVINP 165
>Z68204-1|CAA92426.1| 132|Homo sapiens succinyl coenzyme A
synthetase protein.
Length = 132
Score = 136 bits (328), Expect = 7e-32
Identities = 64/103 (62%), Positives = 74/103 (71%)
Frame = +3
Query: 183 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 362
Y +R++L + TK+I QGFTGKQGTFHSQQAL+YGTK+VGG +P K G HLG PVF
Sbjct: 30 YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89
Query: 363 TVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITE 491
TVKEAK TGATASVIYVPPP +PL+VCITE
Sbjct: 90 TVKEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITE 132
>Z98744-5|CAB11421.1| 226|Homo sapiens histone 1, H1b protein.
Length = 226
Score = 30.3 bits (65), Expect = 5.3
Identities = 27/99 (27%), Positives = 37/99 (37%)
Frame = +3
Query: 123 LSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKV 302
L+ K L G N + +++ T V +G TG G+F + G
Sbjct: 62 LAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKG-TGASGSFKLNKKAASGE-- 118
Query: 303 VGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 419
KKAG KP T K+AK GA +V P
Sbjct: 119 -AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTP 156
>X83509-1|CAA58498.1| 226|Homo sapiens Histone H1.5 protein.
Length = 226
Score = 30.3 bits (65), Expect = 5.3
Identities = 27/99 (27%), Positives = 37/99 (37%)
Frame = +3
Query: 123 LSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKV 302
L+ K L G N + +++ T V +G TG G+F + G
Sbjct: 62 LAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKG-TGASGSFKLNKKAASGE-- 118
Query: 303 VGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 419
KKAG KP T K+AK GA +V P
Sbjct: 119 -AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTP 156
>BC101583-1|AAI01584.1| 226|Homo sapiens histone cluster 1, H1b
protein.
Length = 226
Score = 30.3 bits (65), Expect = 5.3
Identities = 27/99 (27%), Positives = 37/99 (37%)
Frame = +3
Query: 123 LSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKV 302
L+ K L G N + +++ T V +G TG G+F + G
Sbjct: 62 LAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKG-TGASGSFKLNKKAASGE-- 118
Query: 303 VGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 419
KKAG KP T K+AK GA +V P
Sbjct: 119 -AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTP 156
>BC101581-1|AAI01582.1| 226|Homo sapiens histone cluster 1, H1b
protein.
Length = 226
Score = 30.3 bits (65), Expect = 5.3
Identities = 27/99 (27%), Positives = 37/99 (37%)
Frame = +3
Query: 123 LSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKV 302
L+ K L G N + +++ T V +G TG G+F + G
Sbjct: 62 LAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKG-TGASGSFKLNKKAASGE-- 118
Query: 303 VGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 419
KKAG KP T K+AK GA +V P
Sbjct: 119 -AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTP 156
>BC069101-1|AAH69101.1| 226|Homo sapiens histone cluster 1, H1b
protein.
Length = 226
Score = 30.3 bits (65), Expect = 5.3
Identities = 27/99 (27%), Positives = 37/99 (37%)
Frame = +3
Query: 123 LSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKV 302
L+ K L G N + +++ T V +G TG G+F + G
Sbjct: 62 LAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKG-TGASGSFKLNKKAASGE-- 118
Query: 303 VGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 419
KKAG KP T K+AK GA +V P
Sbjct: 119 -AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTP 156
>AF531304-1|AAN06704.1| 226|Homo sapiens histone H1 protein.
Length = 226
Score = 30.3 bits (65), Expect = 5.3
Identities = 27/99 (27%), Positives = 37/99 (37%)
Frame = +3
Query: 123 LSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKV 302
L+ K L G N + +++ T V +G TG G+F + G
Sbjct: 62 LAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKG-TGASGSFKLNKKAASGE-- 118
Query: 303 VGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 419
KKAG KP T K+AK GA +V P
Sbjct: 119 -AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTP 156
>J02960-1|AAA88016.1| 251|Homo sapiens unknown protein protein.
Length = 251
Score = 29.5 bits (63), Expect = 9.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 437 CCSSRGRYINNRGSCSCACLCL 372
C R++ N G C CA LCL
Sbjct: 125 CLGGHSRFLPNVGQCRCAALCL 146
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,737,184
Number of Sequences: 237096
Number of extensions: 1930271
Number of successful extensions: 3732
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3726
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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