Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7o03
(644 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0637 + 4767021-4767083,4767175-4767249,4767339-4767500,476... 188 3e-48
08_02_0811 + 21438848-21439001,21439469-21439662,21439769-214398... 83 2e-16
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 79 3e-15
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 79 3e-15
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 79 4e-15
02_05_0620 - 30412004-30412429,30412509-30412646,30412729-304128... 78 7e-15
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 75 5e-14
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 73 2e-13
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000... 66 2e-11
07_03_1752 - 29218348-29218524,29218593-29218736,29218957-292191... 63 2e-10
09_04_0272 - 16278136-16278289,16278873-16278970,16279090-162792... 56 2e-08
07_03_1755 - 29235650-29235754,29236432-29236525,29236710-292368... 48 6e-06
05_06_0214 - 26425100-26425922,26426008-26426058,26426183-264262... 34 0.084
04_04_0161 + 23203786-23203848,23204141-23204180,23204865-232050... 29 3.2
09_01_0087 + 1245890-1246565,1247409-1247484,1247774-1247893,124... 29 4.2
04_03_0351 - 14761728-14763086,14764742-14764957 29 4.2
07_03_1725 + 29058788-29058932,29059576-29059709 28 5.5
03_05_0890 - 28547462-28547545,28548451-28548528,28548641-285488... 28 5.5
08_02_0731 - 20483518-20484154,20484182-20484375,20484541-204846... 27 9.7
03_05_0882 + 28467691-28467730,28468386-28468675,28469262-284694... 27 9.7
02_03_0121 + 15468894-15468906,15469008-15469193,15474157-154746... 27 9.7
>07_01_0637 +
4767021-4767083,4767175-4767249,4767339-4767500,
4767624-4767702,4767922-4768076,4768225-4768288,
4768928-4769007,4769366-4769431,4769932-4769982,
4770087-4770238,4770270-4770287,4770323-4770413,
4771156-4771236,4771330-4771407,4772315-4772350,
4772425-4772468,4772567-4772645,4773035-4773125,
4773268-4773374
Length = 523
Score = 188 bits (458), Expect = 3e-48
Identities = 82/170 (48%), Positives = 116/170 (68%)
Frame = +1
Query: 124 SSSAPTTKLYIDGQYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTW 303
+SS P +L I G++V+S+ +++TNPAT EV+ R+P T DE +A+DAA+ A+ W
Sbjct: 18 ASSPPRVRLLIGGEFVESRADEHVDVTNPATQEVVSRIPLTTADEFRAAVDAARTAFPGW 77
Query: 304 SKSTVLTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLRGIQSVEHCCSITS 483
+ V TRQ++M K+ L+R N KLA IT EQGKT+ DA GDV RG++ VEH C + +
Sbjct: 78 RNTPVTTRQRIMLKYQELIRANMDKLAENITTEQGKTLKDAWGDVFRGLEVVEHACGMGT 137
Query: 484 LQLGDSIQNIAKDMDTHSYKVPLGVVGGVAAFNFPVMIPLWMFPPALVTG 633
LQ+G+ + N++ +DT S + PLGV G+ FNFP MIPLWMFP A+ G
Sbjct: 138 LQMGEYVSNVSNGIDTFSIREPLGVCAGICPFNFPAMIPLWMFPIAVTCG 187
>08_02_0811 +
21438848-21439001,21439469-21439662,21439769-21439897,
21441552-21441671,21441751-21441887,21441969-21442124,
21442565-21442943,21443041-21443157,21443225-21443371
Length = 510
Score = 82.6 bits (195), Expect = 2e-16
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 7/170 (4%)
Frame = +1
Query: 145 KLYIDGQYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLT 324
+ Y DG++ S + + + NP T RV TQ+E+ ++ AK A K W+++ +
Sbjct: 20 RYYADGEWRVSASGKSVAIVNPTTRLTQYRVQACTQEEVNKVMETAKVAQKAWARTPLWK 79
Query: 325 RQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLRGIQSVEHCC-------SITS 483
R +L+ K A +L+E+++ +A + +E K DA +V+R V +
Sbjct: 80 RAELLHKAAAILKEHKTPIAECLVKEIAKPAKDAISEVVRSGDLVSYTAEEGVRILGEGK 139
Query: 484 LQLGDSIQNIAKDMDTHSYKVPLGVVGGVAAFNFPVMIPLWMFPPALVTG 633
L + DS ++ S KVPLGVV + FN+PV + + PAL+ G
Sbjct: 140 LLVSDSFPGNERNKYCLSSKVPLGVVLAIPPFNYPVNLAVSKIGPALIAG 189
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 79.0 bits (186), Expect = 3e-15
Identities = 46/167 (27%), Positives = 91/167 (54%), Gaps = 3/167 (1%)
Frame = +1
Query: 142 TKLYIDGQYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYK--TWSKST 315
TKL+I+G++VD+ + E +P T +VI RV E ++++ A+ AA+ A+ W + +
Sbjct: 46 TKLFINGRFVDAASGKTFETRDPRTGDVIARVAEGDKEDVDLAVKAAREAFDHGEWPRMS 105
Query: 316 VLTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEG-DVLRGIQSVEHCCSITSLQL 492
R ++M K+A ++ + +LAA + + GK +A A DV + + +
Sbjct: 106 GSERGRVMAKYAEVVERHADELAALESLDAGKPLAAARAVDVGECVGILRYFAGAADKIH 165
Query: 493 GDSIQNIAKDMDTHSYKVPLGVVGGVAAFNFPVMIPLWMFPPALVTG 633
G++++ +++ + ++ + PLGV G + +NFP ++ PAL G
Sbjct: 166 GETLK-MSRQLQGYTLREPLGVAGLIVPWNFPAIMFFSKVSPALAAG 211
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 79.0 bits (186), Expect = 3e-15
Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 8/177 (4%)
Frame = +1
Query: 127 SSAPTTKLYIDGQYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAY---- 294
S+ P L+I G + + + + NPAT IG +P AT +++ A+ AA+ A+
Sbjct: 5 SAIPRRGLFIGGGWREPSLGRRLPVVNPATEATIGDIPAATAEDVELAVSAARDAFGRDG 64
Query: 295 -KTWSKSTVLTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLRGIQSVEHCC 471
+ WS++ R + + A +++ +S LA T + GK + +A GD+ E+
Sbjct: 65 GRHWSRAPGAVRAKYLKAIAAKIKDKKSYLALLETLDSGKPLDEAAGDMEDVAACFEYYA 124
Query: 472 SITSLQLGDSIQNIAKDMDT-HSY--KVPLGVVGGVAAFNFPVMIPLWMFPPALVTG 633
+ G I+ M+ SY K P+GVVG + +N+P+++ W PAL G
Sbjct: 125 DLAEALDGKQRAPISLPMENFESYVLKEPIGVVGLITPWNYPLLMATWKVAPALAAG 181
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 78.6 bits (185), Expect = 4e-15
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 6/173 (3%)
Frame = +1
Query: 142 TKLYIDGQYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYK--TWSKST 315
T+L IDG++VDS + +P T E+I V E +++ A+ AA++A+ W K T
Sbjct: 69 TQLLIDGKFVDSASGKTFPTLDPRTGELIAHVAEGDAEDINRAVHAARKAFDEGPWPKMT 128
Query: 316 VLTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLRGIQSVEHCCSITSLQLG 495
R +++ +FA L+ ++ ++AA T + GK A A + + + +
Sbjct: 129 AYERSRILLRFADLIEKHNDEIAALETWDNGKPYAQAANIEVPMVARLMRYYA----GWA 184
Query: 496 DSIQNIAKDMD-THSYKV---PLGVVGGVAAFNFPVMIPLWMFPPALVTGKHV 642
D I + D H +V P+GV G + +NFP+++ W PAL G V
Sbjct: 185 DKIHGLVVPADGPHHVQVLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTV 237
>02_05_0620 -
30412004-30412429,30412509-30412646,30412729-30412866,
30412966-30413139,30413211-30413684,30413775-30413917,
30414002-30414160,30414943-30415042
Length = 583
Score = 77.8 bits (183), Expect = 7e-15
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 6/173 (3%)
Frame = +1
Query: 142 TKLYIDGQYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYK--TWSKST 315
TKL I+G +VD+ + +P T +VI RV E +++ A+ AA+RA+ W + T
Sbjct: 73 TKLLINGNFVDAASGKTFATVDPRTGDVIARVAEGDAEDVNRAVAAARRAFDEGPWPRMT 132
Query: 316 VLTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLRGIQSVEHCCSITSLQLG 495
R +++ +FA L+ ++ ++AA T + GKT+ G + +
Sbjct: 133 AYERCRVLLRFADLIEQHADEIAALETWDGGKTLEQTTGTEVPMVARYMRYYG----GWA 188
Query: 496 DSIQNIAKDMD-THSYKV---PLGVVGGVAAFNFPVMIPLWMFPPALVTGKHV 642
D I + D H +V P+GV G + +NFP+++ W PAL G V
Sbjct: 189 DKIHGLVVPADGPHHVQVLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNAV 241
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 74.9 bits (176), Expect = 5e-14
Identities = 45/167 (26%), Positives = 88/167 (52%), Gaps = 3/167 (1%)
Frame = +1
Query: 142 TKLYIDGQYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYK--TWSKST 315
TKL+I+G++VD+ + + +P T +V+ + EA + ++ A+ AA+ A++ W + +
Sbjct: 27 TKLFINGEFVDAASGKTFKTRDPRTGDVLAHIAEADKADVDLAVKAAREAFEHGKWPRMS 86
Query: 316 VLTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAE-GDVLRGIQSVEHCCSITSLQL 492
R ++M K A L+ ++ +LAA + GK + + D+ Q + +
Sbjct: 87 GYERSRVMNKLADLVEQHADELAALDGADAGKLLTLGKIIDMPAAAQMMRYYAGAADKIH 146
Query: 493 GDSIQNIAKDMDTHSYKVPLGVVGGVAAFNFPVMIPLWMFPPALVTG 633
G+S++ +A ++ + P+GVVG + +NFP M+ PAL G
Sbjct: 147 GESLR-VAGKYQGYTLREPIGVVGVIIPWNFPTMMFFLKVSPALAAG 192
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 72.9 bits (171), Expect = 2e-13
Identities = 45/143 (31%), Positives = 68/143 (47%)
Frame = +1
Query: 205 NPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLA 384
NPAT E + V E + A+ +A + +WSK T R + + K+ L+ ++ +LA
Sbjct: 103 NPATGETLANVSCMGSKETSDAIASAHSTFYSWSKLTANERSKALRKWHDLIISHKEELA 162
Query: 385 AKITEEQGKTIADAEGDVLRGIQSVEHCCSITSLQLGDSIQNIAKDMDTHSYKVPLGVVG 564
+T EQGK + +A +V G +E+ GD I D K P+GVVG
Sbjct: 163 LLMTLEQGKPMKEALVEVTYGASFIEYFAEEAKRIYGDIIPPTLSDRRLLVLKQPVGVVG 222
Query: 565 GVAAFNFPVMIPLWMFPPALVTG 633
V +NFP+ + PAL G
Sbjct: 223 AVTPWNFPLAMITRKVGPALACG 245
>01_05_0544 +
23098921-23098953,23099209-23099272,23099942-23100084,
23100246-23100719,23100950-23101123,23101230-23101367,
23101489-23101589,23101910-23102183
Length = 466
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 3/149 (2%)
Frame = +1
Query: 196 ELTNPATNEVIGRVPEATQDELTSALDAAKRAYK--TWSKSTVLTRQQLMFKFARLLREN 369
E +P T EVI ++ E + ++ A+ AA+ A+ W + + R +++ KFA L+ ++
Sbjct: 37 ETRDPRTGEVIAKIAEGDKADIDLAVKAAREAFDHGPWPRMSGFARGRILHKFADLVEQH 96
Query: 370 QSKLAAKITEEQGKTIADAE-GDVLRGIQSVEHCCSITSLQLGDSIQNIAKDMDTHSYKV 546
+LAA T + GK A + D+ G + + G++++ +A+ ++ K
Sbjct: 97 VEELAALDTVDAGKLFAMGKLVDIPGGANLLRYYAGAADKVHGETLK-MARPCHGYTLKE 155
Query: 547 PLGVVGGVAAFNFPVMIPLWMFPPALVTG 633
P+GVVG + +N+P + + PAL G
Sbjct: 156 PVGVVGHIVPWNYPTTMFFFKASPALAAG 184
>07_03_1752 -
29218348-29218524,29218593-29218736,29218957-29219148,
29219225-29219440,29219873-29220010,29220137-29220232,
29221204-29221357,29221976-29222098,29222291-29222418,
29222669-29222773,29223396-29223437,29223631-29223746,
29223805-29223916
Length = 580
Score = 63.3 bits (147), Expect = 2e-10
Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Frame = +1
Query: 184 TNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLR 363
T+ ++ PAT + +G P T DE+ + A++A K W+KS+ R+Q + + +
Sbjct: 101 TDKVQCYEPATMKYLGYFPALTPDEVKEHVAQARKAQKIWAKSSFKQRRQFLRILLKYIL 160
Query: 364 ENQSKLAAKITEEQGKTIADAE-GDVLRGIQSVEHCCSITSLQLGDSIQNIAKDMDTHSY 540
E+Q + + + GKT+ DA G+++ + + L ++ + M
Sbjct: 161 EHQDLICEISSRDTGKTMVDASLGEIMTTCEKITWLLDEGEKWLKPEYRSCGRSMLHKKA 220
Query: 541 KV---PLGVVGGVAAFNFP 588
KV PLGV+G + ++N+P
Sbjct: 221 KVEFYPLGVIGAIVSWNYP 239
>09_04_0272 -
16278136-16278289,16278873-16278970,16279090-16279230,
16279701-16279865,16279941-16280117,16280330-16280510,
16280784-16280829,16281178-16281241,16281331-16281353,
16281964-16282036,16282410-16282541,16283343-16283429,
16283488-16283700
Length = 517
Score = 56.0 bits (129), Expect = 2e-08
Identities = 45/143 (31%), Positives = 62/143 (43%), Gaps = 3/143 (2%)
Frame = +1
Query: 223 VIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLAAKITEE 402
VI V EA+ E + A A KTW R +++ + LR L ++ E
Sbjct: 72 VIAEVVEASAREYEEGMRACYDAAKTWMAIPAPKRGEIVRQIGDALRAKLHHLGRLVSLE 131
Query: 403 QGKTIADAEGDVLRGIQSVEHCCSITSLQLGDSIQNIAKDMDTHSYKV---PLGVVGGVA 573
GK + + G+V I ++ + S QL SI I + H PLGVVG +
Sbjct: 132 MGKILPEGIGEVQEIIDMCDYAVGL-SRQLNGSI--IPSERPNHMMMEVWNPLGVVGVIT 188
Query: 574 AFNFPVMIPLWMFPPALVTGKHV 642
AFNFP + W ALV G V
Sbjct: 189 AFNFPCAVLGWNACIALVCGNCV 211
>07_03_1755 -
29235650-29235754,29236432-29236525,29236710-29236837,
29237077-29237181,29237706-29237773,29237926-29238037
Length = 203
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 184 TNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLR 363
T+ ++ PAT + +G P T DE+ + A++A K W+KS+ R Q + + +
Sbjct: 71 TDKVQCYEPATMKYLGYFPALTPDEVKEHVAQARKAQKIWAKSSSKQRCQFLRILLKYIL 130
Query: 364 ENQSKLAAKITEEQGKTIADAE-GDVL 441
E+Q + + GKT+ DA G+++
Sbjct: 131 EHQDLICEISPRDTGKTMVDASLGEIM 157
>05_06_0214 -
26425100-26425922,26426008-26426058,26426183-26426256,
26426344-26426441,26426547-26426671,26426724-26426957,
26426992-26427037,26427101-26427152,26427331-26427367,
26427521-26427637,26428287-26428352,26428439-26428518,
26429102-26429311,26429650-26429739,26430093-26430182,
26430280-26430411,26430876-26431094,26431203-26431286,
26431543-26431656,26431857-26431914,26432535-26432602,
26432847-26432962,26433495-26433574,26433839-26433912
Length = 1045
Score = 34.3 bits (75), Expect = 0.084
Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 10/170 (5%)
Frame = +1
Query: 154 IDGQYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQQ 333
+ G + S NW L +P E +V E + E+ +++ K + + ++
Sbjct: 56 VQGSWTTSGNWNW--LVDPLNGEKFIKVAEVQEAEIKPFVESLSNCPKHGLHNPLKAPER 113
Query: 334 -LMF-----KFARLLRENQ-SKLAAKITEEQG-KTIADAEGDVLRGIQSVEHCCS--ITS 483
LM+ K A +L + S AK+ + K+ A +V + +E+ C +
Sbjct: 114 YLMYGDISAKAANMLGQPVVSDFFAKLIQRVSPKSYQQALAEVQVSQKFLENFCGDQVRF 173
Query: 484 LQLGDSIQNIAKDMDTHSYKVPLGVVGGVAAFNFPVMIPLWMFPPALVTG 633
L ++ ++ Y+ P G V + FNFP+ IPL AL G
Sbjct: 174 LARSFAVPGNHLGQSSNGYRWPYGPVAIITPFNFPLEIPLLQLMGALYMG 223
>04_04_0161 +
23203786-23203848,23204141-23204180,23204865-23205016,
23205270-23205406,23206356-23206396,23206500-23207098,
23207599-23207679,23208146-23208208,23209141-23209197
Length = 410
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 199 LTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWS 306
L P T+ + R+P A + LD+++ AY +WS
Sbjct: 221 LPEPRTSALPSRIPSARSMDDLLKLDSSREAYSSWS 256
>09_01_0087 +
1245890-1246565,1247409-1247484,1247774-1247893,
1248927-1249002,1250767-1250835,1251019-1251099,
1251298-1251369,1251600-1251692,1251904-1252083,
1252558-1252641,1252729-1252872,1253089-1253178,
1255982-1256064,1256140-1256421,1256722-1256959,
1258307-1258957
Length = 1004
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 591 HREIEGCNTSNNSKWHLVAMRVHVFGDV 508
HRE CN + S W L A+ +HV V
Sbjct: 703 HREPSYCNADHASWWELTALALHVHPSV 730
>04_03_0351 - 14761728-14763086,14764742-14764957
Length = 524
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 229 GRVPEATQDELTSALDAAKRAYKTWSKSTVL--TRQQLMFKFARLLRE 366
G P+A ++E+ LD+ KRA+K W + R+Q +++ A L E
Sbjct: 29 GSTPQAVREEVDGFLDSRKRAFK-WEVGVCVRRLRKQALYRPALKLSE 75
>07_03_1725 + 29058788-29058932,29059576-29059709
Length = 92
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1
Query: 221 SLVAGLVSSIQLVVFESTYCPSIYSFV 141
S+V GLVS+ + FEST PSI F+
Sbjct: 45 SIVPGLVSAQECNYFESTQIPSIRKFL 71
>03_05_0890 -
28547462-28547545,28548451-28548528,28548641-28548814,
28548902-28548958,28549065-28549116,28549907-28549995,
28550259-28550344,28550427-28550637,28551790-28551882,
28551958-28552098,28552175-28552267,28553879-28554113,
28554263-28554435,28555234-28556571,28556668-28556853,
28557625-28557713,28557756-28557905,28557951-28558596
Length = 1324
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 466 CCSITSLQLGDSIQNIAKDMDTHSYKVPLGVV 561
CC +T + + I +D+D H ++P+GV+
Sbjct: 413 CCVMTPGEFWLQCEGIVQDLDDHRQELPMGVL 444
>08_02_0731 -
20483518-20484154,20484182-20484375,20484541-20484640,
20485282-20485622
Length = 423
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = -2
Query: 307 CSMSYRPS---WLHPKRKSIHPELPLAPCQLL 221
C +RP WLHP R+S P P +P ++L
Sbjct: 269 CGHVHRPRLSRWLHPPRRSSSPVPPPSPRRIL 300
>03_05_0882 +
28467691-28467730,28468386-28468675,28469262-28469411,
28470126-28470214,28470331-28470440,28470545-28470639,
28471110-28471162,28471374-28471539,28471909-28472001,
28472304-28472432,28472549-28472668,28472862-28472942,
28473495-28473602,28473895-28474038,28474120-28474218,
28474300-28474379,28474830-28474922,28475197-28475320
Length = 687
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 349 ARLLRENQSKLAAKIT--EEQGKTIADAEGDVLRGIQSVEHCCSI 477
+ LL E + K+A EEQ K I E D+L+G S + S+
Sbjct: 412 SNLLEEAEKKIAELTAKAEEQQKLILKLEDDILKGYSSTDRRTSL 456
>02_03_0121 +
15468894-15468906,15469008-15469193,15474157-15474650,
15475090-15475521,15475597-15475821,15476065-15476346,
15476432-15476704,15477680-15477805,15481010-15481288,
15481313-15481588,15481670-15482113,15482200-15482397,
15482574-15482732,15482832-15483085,15483164-15483316,
15483395-15483683,15483769-15483807,15483913-15483951
Length = 1386
Score = 27.5 bits (58), Expect = 9.7
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 2/111 (1%)
Frame = +1
Query: 232 RVPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLAAKITEEQGK 411
RV +A + TS + A++ + +K R +L F+F L ++K+ +I EEQ K
Sbjct: 445 RVYDAIYKKRTS--NKAEKDARLEAKIRASIRAKLTFEFDEKLESMRAKIRQEIQEEQQK 502
Query: 412 --TIADAEGDVLRGIQSVEHCCSITSLQLGDSIQNIAKDMDTHSYKVPLGV 558
A A + L C+ T L + N A D T L V
Sbjct: 503 PQAAAAATHEELGSPTQKHSSCASTELAENPTSVNSAVDHITEPTSYTLTV 553
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,150,991
Number of Sequences: 37544
Number of extensions: 361010
Number of successful extensions: 1040
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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