Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7n07
         (486 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    25   1.4  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   1.8  
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           22   9.7  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           22   9.7  

>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +3

Query: 18  QCSKT-IGSSSGPCPDQKS*SYNQNCRRHCHPREGSIQGFTRRSSSG 155
           +C K  + S   PCP +   S    C+  C P     +GF R +  G
Sbjct: 25  RCPKNEVYSCCAPCPQKACISEAVKCQTSCLPGCVCKKGFVRETQFG 71


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 223 LLPEYGGTKVSLENDEKEYHLFRESD 300
           LL E  GT+V  E  E+  +L RES+
Sbjct: 158 LLREVAGTRVYDERKEESMNLLRESE 183


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 221 TLSPTLT*TGMKSPFSFRAPGPTATTS 141
           T++PT T T   +  +  APG T TT+
Sbjct: 42  TVAPTTTTTVAPTTTTTVAPGQTTTTT 68


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 221 TLSPTLT*TGMKSPFSFRAPGPTATTS 141
           T++PT T T   +  +  APG T TT+
Sbjct: 42  TVAPTTTTTVAPTTTTTVAPGQTTTTT 68


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,410
Number of Sequences: 2352
Number of extensions: 7475
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)