Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7n07
(486 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084153-5|AAK84584.1| 108|Caenorhabditis elegans Hypothetical ... 113 8e-26
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 31 0.59
AF036705-10|AAB95167.2| 612|Caenorhabditis elegans Hypothetical... 29 1.4
Z77670-1|CAB01247.1| 484|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z75525-7|CAH10769.1| 573|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z75525-6|CAA99765.2| 623|Caenorhabditis elegans Hypothetical pr... 28 3.1
AF003925-1|AAB61344.1| 573|Caenorhabditis elegans mRNA capping ... 28 3.1
AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein. 28 4.1
AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein. 28 4.1
AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical ... 28 4.1
AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical ... 28 4.1
Z70034-14|CAC44294.1| 356|Caenorhabditis elegans Hypothetical p... 27 5.5
Z70034-13|CAC44293.1| 350|Caenorhabditis elegans Hypothetical p... 27 5.5
Z49910-11|CAC44292.1| 356|Caenorhabditis elegans Hypothetical p... 27 5.5
Z49910-10|CAC44291.1| 350|Caenorhabditis elegans Hypothetical p... 27 5.5
Z92804-2|CAB07253.2| 321|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z69383-4|CAA93411.2| 326|Caenorhabditis elegans Hypothetical pr... 27 7.2
AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical ... 27 7.2
AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical ... 27 7.2
AF005372-1|AAB81030.1| 225|Caenorhabditis elegans histone H1.5 ... 27 7.2
AF003145-1|AAB57720.1| 225|Caenorhabditis elegans Histone h1 li... 27 7.2
Z73423-3|CAA97775.2| 327|Caenorhabditis elegans Hypothetical pr... 27 9.5
U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical pr... 27 9.5
>AC084153-5|AAK84584.1| 108|Caenorhabditis elegans Hypothetical
protein Y22D7AL.10 protein.
Length = 108
Score = 113 bits (271), Expect = 8e-26
Identities = 54/97 (55%), Positives = 70/97 (72%)
Frame = +1
Query: 16 ANAVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKVLHGEVVAVGPGARKENGDFIP 195
+N +K PL DRVL++R A TKT GGI++PEK+Q KVL VV+ G G R E G+ +
Sbjct: 10 SNVLKTFKPLYDRVLVERVAAETKTKGGIMLPEKSQGKVLEATVVSAGAGLRNEKGELVA 69
Query: 196 VQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDIL 306
+ V GD+VLLPEYGGTKV +E +KEY +FRESD+L
Sbjct: 70 LTVKPGDRVLLPEYGGTKVVVE--DKEYSIFRESDLL 104
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 30.7 bits (66), Expect = 0.59
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = -2
Query: 245 VPPYSGRRTLSPTLT*TGMKSPFSFRAPGPTATTSPCKTLD*AFSGMTMPPAV 87
VPPYSG RT+ P P + P P T T + +PP V
Sbjct: 257 VPPYSGYRTIPPVYNHYETVPPAAQTTPQPPCTPRTTTTTTTTTTTTALPPCV 309
>AF036705-10|AAB95167.2| 612|Caenorhabditis elegans Hypothetical
protein F37C4.1 protein.
Length = 612
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 315 NFRQ-YVRLSEEMIFFLIIFKAYFSTAVFWKKNFITHTNLNGDEVS 181
NF + Y+RLS I L++ + + V K + H N +G ++S
Sbjct: 288 NFEKWYLRLSSTSIGLLVVALFFINIVVINKDQILDHVNFSGKDIS 333
>Z77670-1|CAB01247.1| 484|Caenorhabditis elegans Hypothetical
protein W05E10.1 protein.
Length = 484
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1
Query: 318 FNFRQYVRLSEEMIFFLIIFKAYFSTAVFWKK 223
FN Y +S EM+ FLII ST +FWK+
Sbjct: 434 FNSSGYTWVSVEMLTFLII--GALSTCIFWKQ 463
>Z75525-7|CAH10769.1| 573|Caenorhabditis elegans Hypothetical
protein C03D6.3b protein.
Length = 573
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 234 FWKKNFITHTNLNGDEVSIFFSGSRTDRYYF 142
F +H +L+G ++ ++ + TDRYYF
Sbjct: 43 FHPAEVFSHPHLHGKKIGLWIDLTNTDRYYF 73
>Z75525-6|CAA99765.2| 623|Caenorhabditis elegans Hypothetical
protein C03D6.3a protein.
Length = 623
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 234 FWKKNFITHTNLNGDEVSIFFSGSRTDRYYF 142
F +H +L+G ++ ++ + TDRYYF
Sbjct: 55 FHPAEVFSHPHLHGKKIGLWIDLTNTDRYYF 85
>AF003925-1|AAB61344.1| 573|Caenorhabditis elegans mRNA capping
enzyme protein.
Length = 573
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 234 FWKKNFITHTNLNGDEVSIFFSGSRTDRYYF 142
F +H +L+G ++ ++ + TDRYYF
Sbjct: 43 FHPAEVFSHPHLHGKKIGLWIDLTNTDRYYF 73
>AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein.
Length = 510
Score = 27.9 bits (59), Expect = 4.1
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 275 SFSSFSRLTLVPPYS-GRRTLSPTLT*TGMKSPFSFRAPGPTATTS 141
SFSS+ R + S RT S T T + + S AP PTAT+S
Sbjct: 17 SFSSWRRSSTSGSISQSSRTTSKTTTSSSVTSSNPINAPPPTATSS 62
>AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein.
Length = 550
Score = 27.9 bits (59), Expect = 4.1
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 275 SFSSFSRLTLVPPYS-GRRTLSPTLT*TGMKSPFSFRAPGPTATTS 141
SFSS+ R + S RT S T T + + S AP PTAT+S
Sbjct: 21 SFSSWRRSSTSGSISQSSRTTSKTTTSSSVTSSNPINAPPPTATSS 66
>AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical
protein F58D5.4b protein.
Length = 510
Score = 27.9 bits (59), Expect = 4.1
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 275 SFSSFSRLTLVPPYS-GRRTLSPTLT*TGMKSPFSFRAPGPTATTS 141
SFSS+ R + S RT S T T + + S AP PTAT+S
Sbjct: 17 SFSSWRRSSTSGSISQSSRTTSKTTTSSSVTSSNPINAPPPTATSS 62
>AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical
protein F58D5.4a protein.
Length = 550
Score = 27.9 bits (59), Expect = 4.1
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 275 SFSSFSRLTLVPPYS-GRRTLSPTLT*TGMKSPFSFRAPGPTATTS 141
SFSS+ R + S RT S T T + + S AP PTAT+S
Sbjct: 21 SFSSWRRSSTSGSISQSSRTTSKTTTSSSVTSSNPINAPPPTATSS 66
>Z70034-14|CAC44294.1| 356|Caenorhabditis elegans Hypothetical
protein C18E9.11b protein.
Length = 356
Score = 27.5 bits (58), Expect = 5.5
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -1
Query: 360 NRIRITC*SYHHSVFNFRQYVRLSEEMIFFLIIFKAYFST---AVFWKKNFITHTNLNGD 190
NRI T S+F F + +L E+++ + F Y+ST F + FI +N G
Sbjct: 161 NRILTTVQKCQRSIFIFDEADKLPEQLLGAIKPFLDYYSTISGVDFRRSIFILLSNKGGG 220
Query: 189 EVS 181
E++
Sbjct: 221 EIA 223
>Z70034-13|CAC44293.1| 350|Caenorhabditis elegans Hypothetical
protein C18E9.11a protein.
Length = 350
Score = 27.5 bits (58), Expect = 5.5
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -1
Query: 360 NRIRITC*SYHHSVFNFRQYVRLSEEMIFFLIIFKAYFST---AVFWKKNFITHTNLNGD 190
NRI T S+F F + +L E+++ + F Y+ST F + FI +N G
Sbjct: 155 NRILTTVQKCQRSIFIFDEADKLPEQLLGAIKPFLDYYSTISGVDFRRSIFILLSNKGGG 214
Query: 189 EVS 181
E++
Sbjct: 215 EIA 217
>Z49910-11|CAC44292.1| 356|Caenorhabditis elegans Hypothetical
protein C18E9.11b protein.
Length = 356
Score = 27.5 bits (58), Expect = 5.5
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -1
Query: 360 NRIRITC*SYHHSVFNFRQYVRLSEEMIFFLIIFKAYFST---AVFWKKNFITHTNLNGD 190
NRI T S+F F + +L E+++ + F Y+ST F + FI +N G
Sbjct: 161 NRILTTVQKCQRSIFIFDEADKLPEQLLGAIKPFLDYYSTISGVDFRRSIFILLSNKGGG 220
Query: 189 EVS 181
E++
Sbjct: 221 EIA 223
>Z49910-10|CAC44291.1| 350|Caenorhabditis elegans Hypothetical
protein C18E9.11a protein.
Length = 350
Score = 27.5 bits (58), Expect = 5.5
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -1
Query: 360 NRIRITC*SYHHSVFNFRQYVRLSEEMIFFLIIFKAYFST---AVFWKKNFITHTNLNGD 190
NRI T S+F F + +L E+++ + F Y+ST F + FI +N G
Sbjct: 155 NRILTTVQKCQRSIFIFDEADKLPEQLLGAIKPFLDYYSTISGVDFRRSIFILLSNKGGG 214
Query: 189 EVS 181
E++
Sbjct: 215 EIA 217
>Z92804-2|CAB07253.2| 321|Caenorhabditis elegans Hypothetical
protein K05D4.3 protein.
Length = 321
Score = 27.1 bits (57), Expect = 7.2
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -1
Query: 393 QRF-ICARYN*TNRIRITC*SYHHSVFNFRQYVRLSEEMIFFLIIFKAYFSTAVFWKKNF 217
QRF IC N ++IT + + VF Y L E++IFFL+ + + + VF+ ++
Sbjct: 129 QRFCICFHPRSENYLKITHGTLNWIVFIGYAYFLL-EKVIFFLMCLRDFEAAKVFYMFSY 187
Query: 216 IT 211
I+
Sbjct: 188 IS 189
>Z69383-4|CAA93411.2| 326|Caenorhabditis elegans Hypothetical
protein F13E9.9 protein.
Length = 326
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +1
Query: 91 AGGIVIPEKAQS--KVLHGEVVAVGPGARKENGD 186
+G IPEK K + G+ ++ PG +K+NGD
Sbjct: 207 SGAASIPEKVVDGVKSIPGKAKSILPGGKKKNGD 240
>AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical
protein Y25C1A.8b protein.
Length = 219
Score = 27.1 bits (57), Expect = 7.2
Identities = 16/63 (25%), Positives = 25/63 (39%)
Frame = +3
Query: 12 NGQCSKTIGSSSGPCPDQKS*SYNQNCRRHCHPREGSIQGFTRRSSSGRSWSPKRKWRLH 191
+ +CS + CP+ + + H RE + +RS+S R KR R
Sbjct: 102 DSECSCSCSGGECSCPESEDEKEKDRRKMHKTSRERDRESHRKRSNSPRDRDRKRGKRSR 161
Query: 192 PRS 200
RS
Sbjct: 162 SRS 164
>AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical
protein Y25C1A.8a protein.
Length = 345
Score = 27.1 bits (57), Expect = 7.2
Identities = 16/63 (25%), Positives = 25/63 (39%)
Frame = +3
Query: 12 NGQCSKTIGSSSGPCPDQKS*SYNQNCRRHCHPREGSIQGFTRRSSSGRSWSPKRKWRLH 191
+ +CS + CP+ + + H RE + +RS+S R KR R
Sbjct: 228 DSECSCSCSGGECSCPESEDEKEKDRRKMHKTSRERDRESHRKRSNSPRDRDRKRGKRSR 287
Query: 192 PRS 200
RS
Sbjct: 288 SRS 290
>AF005372-1|AAB81030.1| 225|Caenorhabditis elegans histone H1.5
protein.
Length = 225
Score = 27.1 bits (57), Expect = 7.2
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +1
Query: 1 EKIEMANAVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKVLHGEVVAVGPGARKE 177
+K++ + KR+ + + K+A A TK+A P+KA + + AV A K+
Sbjct: 154 DKVKKVKSPKRIAKPAVKKVTKKAAAPTKSAANETAPKKAAATEAAPKKAAVTKAATKK 212
>AF003145-1|AAB57720.1| 225|Caenorhabditis elegans Histone h1 like
protein 5 protein.
Length = 225
Score = 27.1 bits (57), Expect = 7.2
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +1
Query: 1 EKIEMANAVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKVLHGEVVAVGPGARKE 177
+K++ + KR+ + + K+A A TK+A P+KA + + AV A K+
Sbjct: 154 DKVKKVKSPKRIAKPAVKKVTKKAAAPTKSAANETAPKKAAATEAAPKKAAVTKAATKK 212
>Z73423-3|CAA97775.2| 327|Caenorhabditis elegans Hypothetical
protein C03A3.1a protein.
Length = 327
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = -2
Query: 329 IIQFSIFASMSDSLKR*YSFSSFSRLTLVPPYSGRRTLSPTL 204
+ S+F +SD LK + S+ + L ++ ++ ++ L PT+
Sbjct: 17 LFMLSVFPKISDPLKLKFQISAHAVLAILFAFAAQQFLKPTI 58
>U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical
protein F53H8.3 protein.
Length = 569
Score = 26.6 bits (56), Expect = 9.5
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = -1
Query: 324 SVFNFRQYVRLSEEMIFFLIIFKAYFSTAVFWKKNFITHTNLNGDEVSIFFSGSRTDRYY 145
S F Y R+S ++ + F + +T FWKKN I HT L +S G+ Y
Sbjct: 248 SFFCVYLYTRIS--LLGLYLNFANHLATTKFWKKNVI-HTALKLKLLSSKLRGNAKLHGY 304
Query: 144 F 142
F
Sbjct: 305 F 305
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,784,230
Number of Sequences: 27780
Number of extensions: 187224
Number of successful extensions: 555
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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