Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7n06
         (215 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   1.7  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    21   3.9  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    21   5.2  
U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...    21   6.9  
AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450 CY...    21   6.9  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 67   QNIVDIFQEFILCLIFCLKIFRLKFLRVF 153
            Q I  IF   ++CLIF L IF +  +++F
Sbjct: 1429 QAIPSIFNVLLVCLIFWL-IFAIMGVQLF 1456


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 153 FLSDCMYIFC 182
           FL DC+ IFC
Sbjct: 791 FLQDCIEIFC 800


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 82  IFQEFILCLIFCLKIFRLKFLRVFFCLIVC 171
           IF   ++ ++FC+    +  L VF  ++VC
Sbjct: 88  IFSNKLVQIVFCVLYSSIFVLGVFGNVLVC 117


>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 164 IRQKNTLKNLRRKILRQK 111
           + +K T  NLR+ + RQK
Sbjct: 64  LSKKRTKSNLRKYVKRQK 81


>AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450
           CYP6P2 protein.
          Length = 507

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 128 KILRQKIRHKINS*NMSTMF 69
           KILRQK+     S  M  MF
Sbjct: 131 KILRQKLTPTFTSGKMKQMF 150


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,828
Number of Sequences: 2352
Number of extensions: 2098
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 49
effective length of database: 448,731
effective search space used:  9872082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)