Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7n06
         (215 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    21   1.3  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    20   3.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    20   3.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    19   6.7  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    19   6.7  
AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic hor...    19   8.8  

>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 1.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 197 IKFTLTKNVHTIRQKNTLKNLRR 129
           I+ T++K +     K T+KNLR+
Sbjct: 19  IEDTMSKKMTIEEAKKTIKNLRK 41


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -3

Query: 180 KKCTYNQTKKY 148
           KKC+YN    Y
Sbjct: 188 KKCSYNMDSSY 198


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 1   TYVNYYFFSIVSSLHVNFF 57
           T VNY     +S++ ++FF
Sbjct: 568 TIVNYSIMIFLSAVFISFF 586


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 1   TYVNYYFFSIVSS 39
           T  NYY FS+  S
Sbjct: 86  TATNYYLFSLAVS 98


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 1   TYVNYYFFSIVSS 39
           T  NYY FS+  S
Sbjct: 73  TATNYYLFSLAIS 85


>AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic
           hormone-I protein.
          Length = 52

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = -1

Query: 188 TLTKNVHTIRQKNTLKNLRRKILRQKIRHKIN 93
           ++  ++  +RQ+  L+  RRK L+ + +   N
Sbjct: 12  SIVNSMDVLRQRVLLELARRKALQDQAQIDAN 43


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,281
Number of Sequences: 438
Number of extensions: 556
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3154875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)