Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7n01
(562 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0339 - 4429742-4429840,4429932-4430012,4430232-4430291,443... 90 1e-18
12_02_1181 - 26732439-26732528,26732883-26732963,26733104-267331... 82 3e-16
03_05_1124 + 30559633-30559674,30559781-30559890,30559973-305600... 78 4e-15
01_06_1119 - 34640611-34640721,34640995-34641075,34641437-346414... 73 1e-13
01_07_0387 - 43224718-43224810,43224990-43225070,43225676-432257... 64 6e-11
06_01_0358 + 2573241-2573324,2573509-2573636,2573769-2573971,257... 63 2e-10
03_02_0162 + 6053144-6053365,6053474-6053548,6054477-6054623,605... 60 9e-10
06_03_0487 - 21352955-21353080,21353164-21353357,21353815-213539... 57 1e-08
06_03_0486 - 21344680-21344805,21344922-21345115,21350027-213501... 54 8e-08
06_03_0491 - 21383036-21383161,21383246-21383439,21383627-213837... 54 1e-07
06_03_0488 - 21361131-21361226,21361922-21362124,21362252-213624... 41 8e-04
04_04_0753 - 27797298-27797547,27797765-27797951,27798040-277981... 37 0.010
06_01_0359 + 2578179-2578291,2578950-2579152,2579319-2579444,257... 31 0.63
02_04_0363 + 22369461-22370127,22370240-22370310,22370412-223709... 29 1.9
02_05_0577 - 30100084-30100251,30100474-30100548,30100631-301007... 29 2.5
10_07_0055 - 12424320-12424899,12424978-12425160,12425810-124259... 29 3.4
11_05_0059 - 18724619-18725053 28 4.4
04_04_0373 - 24785799-24786200,24787979-24788161,24790909-247911... 28 4.4
03_02_0882 - 12121917-12124446,12124739-12124919,12125057-121251... 28 4.4
03_01_0038 - 340564-341108,341214-341463,341546-341649,341728-34... 28 4.4
09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166 28 5.9
02_05_0795 - 31792231-31794780 27 7.7
02_05_0752 + 31491462-31491921,31492177-31492271,31492346-314925... 27 7.7
02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715 27 7.7
>04_01_0339 -
4429742-4429840,4429932-4430012,4430232-4430291,
4430715-4430794,4430923-4430974,4431045-4431182,
4431449-4431712,4432031-4432088,4433261-4433370,
4433604-4433795
Length = 377
Score = 89.8 bits (213), Expect = 1e-18
Identities = 52/126 (41%), Positives = 73/126 (57%), Gaps = 2/126 (1%)
Frame = +3
Query: 99 EIKASALDLIGNTPIVALDRLHPGPG-RILAKCEFMNPGASIKCRSSLCMIKKALASGEL 275
+I+ SA LIG TP+V L+++ G G RI AK EF+ P S+K R ++ M++ A G +
Sbjct: 57 KIRDSASQLIGRTPMVYLNKVTEGCGARIAAKLEFLQPSFSVKDRPAISMLEDAEKKGLI 116
Query: 276 KP-KEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVE 452
P K ++E TSGN G GLA + A+ G+ L L M S +R + M A GAK V +
Sbjct: 117 TPGKTTLIEPTSGNMGIGLAFMAALKGYELILTMPSYTSLERRVTMRAFGAKLVLTDPTK 176
Query: 453 GTYGNV 470
G G V
Sbjct: 177 GMGGTV 182
>12_02_1181 -
26732439-26732528,26732883-26732963,26733104-26733163,
26733372-26733451,26733815-26733866,26733987-26734124,
26734203-26734466,26735895-26735952,26736153-26736262,
26736385-26736432,26736812-26736823
Length = 330
Score = 82.2 bits (194), Expect = 3e-16
Identities = 56/154 (36%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Frame = +3
Query: 102 IKASALDLIGNTPIVALDRLHPG-PGRILAKCEFMNPGASIKCRSSLCMIKKALASGELK 278
I +LIGNTP+V L+R+ G GR+ AK E M P +S+K R MI A G +
Sbjct: 14 IAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLIT 73
Query: 279 P-KEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVEG 455
P K ++E TSGN G GLA + A G+ L L M S +R I ++A GA+ + + G
Sbjct: 74 PGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLG 133
Query: 456 TYGNVTLNDVKAVEEVGLRIVKETGAYYVNQFNN 557
G V+ EE+ K ++ + QF N
Sbjct: 134 MKG-----AVQKAEELA---AKTNNSFILQQFEN 159
>03_05_1124 +
30559633-30559674,30559781-30559890,30559973-30560030,
30560455-30560718,30560803-30560940,30561264-30561315,
30561525-30561604,30561929-30561988,30562084-30562164,
30562299-30562376,30563548-30563676,30563896-30564039,
30564145-30564290,30564402-30564558,30564657-30564715,
30564800-30564959,30565054-30565203,30565309-30565445,
30565531-30565677,30565995-30566052,30566417-30566518,
30566590-30566627,30566846-30566972,30567053-30567223,
30567313-30567444,30567575-30567681,30567815-30567875,
30567970-30568147,30568245-30568450,30568781-30568879,
30569021-30569236,30569333-30569472,30569559-30569660,
30569747-30569861,30570129-30570194,30570323-30570480,
30570594-30570690,30570931-30571137,30571435-30571505,
30571648-30571747,30571836-30571892,30571969-30572025,
30572108-30572188,30572319-30572401,30572504-30572651
Length = 1722
Score = 78.2 bits (184), Expect = 4e-15
Identities = 54/154 (35%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Frame = +3
Query: 102 IKASALDLIGNTPIVALDRLHPG-PGRILAKCEFMNPGASIKCRSSLCMIKKALASGELK 278
I + LIGNTP+V L+++ G +I AK E M P +S+K R MI A G +
Sbjct: 8 IASDVTALIGNTPLVYLNKVVDGCEAQIAAKLEIMEPCSSVKDRIGYSMITDAEEKGLIT 67
Query: 279 P-KEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVEG 455
P K ++E TSGN G GLA + A G+ L L M S +R I ++A GA+ V + G
Sbjct: 68 PGKSVLIEPTSGNTGIGLAFMAAAKGYKLILTMPASMSMERRIILKAFGAELVLTDPLLG 127
Query: 456 TYGNVTLNDVKAVEEVGLRIVKETGAYYVNQFNN 557
G A+++ K +Y + QF N
Sbjct: 128 MKG--------AIQKADELAAKMPNSYILQQFEN 153
>01_06_1119 -
34640611-34640721,34640995-34641075,34641437-34641496,
34641596-34641645,34641758-34641809,34642462-34642599,
34642716-34642979,34643057-34643114,34643178-34643287,
34643650-34643925
Length = 399
Score = 73.3 bits (172), Expect = 1e-13
Identities = 55/154 (35%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Frame = +3
Query: 102 IKASALDLIGNTPIVALDRLHPG-PGRILAKCEFMNPGASIKCRSSLCMIKKALASGELK 278
I LIG TP+V L+ + G I AK E+M P S+K R L MI A G +
Sbjct: 86 IAQDVTQLIGKTPMVYLNNVVDGCVANIAAKLEYMGPCRSVKDRIGLSMINDAEEKGLIF 145
Query: 279 PKEPV-VEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVEG 455
P + + VE T+GN G GLA V A G+ L + +R + + A GA+ V +G
Sbjct: 146 PNKTILVEPTTGNTGIGLASVAAARGYKLIATVPSSIDVERCVLLRAFGAEIVLTDPNKG 205
Query: 456 TYGNVTLNDVKAVEEVGLRIVKETGAYYVNQFNN 557
G + KA EE+ + K AY QFNN
Sbjct: 206 LKGALD----KA-EEI---VSKTPNAYMFQQFNN 231
>01_07_0387 -
43224718-43224810,43224990-43225070,43225676-43225735,
43227129-43227208,43227285-43227336,43227412-43227549,
43227627-43227944,43229381-43229438,43229520-43229629,
43230041-43230280
Length = 409
Score = 64.5 bits (150), Expect = 6e-11
Identities = 56/166 (33%), Positives = 76/166 (45%), Gaps = 20/166 (12%)
Frame = +3
Query: 120 DLIGNTPIVALDRLHPG-PGRILAKCEFMNPGASIKCRSSLCMIKKA-----LASGELKP 281
DLIG TP+V L+ + G + AK E M P S+K R MI A + G+L P
Sbjct: 80 DLIGKTPMVYLNNIVKGCVANVAAKLEIMEPCCSVKDRIGYSMISDAEEKGLITPGKLSP 139
Query: 282 KE--------------PVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEAL 419
+ +VE TSGN G GLA + A G+ L L M S +R + ++A
Sbjct: 140 SDLPCMTYYFMLYAQSVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSMERRVLLKAF 199
Query: 420 GAKCVRVPQVEGTYGNVTLNDVKAVEEVGLRIVKETGAYYVNQFNN 557
GA+ V +G G V KA E + K AY + QF+N
Sbjct: 200 GAELVLTDAAKGMKGAVD----KATEILN----KTPDAYMLQQFDN 237
>06_01_0358 +
2573241-2573324,2573509-2573636,2573769-2573971,
2574129-2574254,2574522-2574680,2574857-2575050,
2575251-2575376
Length = 339
Score = 62.9 bits (146), Expect = 2e-10
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
Frame = +3
Query: 69 AMANNNSVDNEIKASALDLIGNTPIVALDRLHPGPG---RILAKCEFMNPGASIKCRSSL 239
++ N++S D I L+G TP++ L+R+ G RI+ K E P S+K RS+L
Sbjct: 11 SLLNSSSSDEHIATDITQLVGWTPLIELNRIVRKDGVNARIVGKLESYQPLCSVKDRSAL 70
Query: 240 CMIKKALASGELKPK-EPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEA 416
MI+ A G + P +VE TSGN G G+A + G+ M S + + +
Sbjct: 71 RMIEDAEEKGLISPGVTTLVEPTSGNLGIGVAYNALLKGYRFVAVMPAEYSLDKQMLLTY 130
Query: 417 LGAKCVRVPQVEGTYGNV 470
LGA+ + G G +
Sbjct: 131 LGAEVILTDPTLGFQGQL 148
>03_02_0162 +
6053144-6053365,6053474-6053548,6054477-6054623,
6054749-6055300,6055387-6055622,6055914-6056130
Length = 482
Score = 60.5 bits (140), Expect = 9e-10
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +3
Query: 117 LDLIGNTPIVALDRLHPGPG-RILAKCEFMNPGASIKCRSSLCMIKKALASGELKPKEPV 293
++ IGNTP++ ++ L G IL K EF+NPG S+K R ++ +I++AL SG+L V
Sbjct: 53 VEAIGNTPLIRINSLSDATGCEILGKAEFLNPGGSVKDRVAVKIIEEALESGDLLCGGTV 112
Query: 294 VEVTSGNQGCGLAVVCAVLG 353
E ++G+ LA+V G
Sbjct: 113 TEGSAGSTAISLAIVAPAYG 132
>06_03_0487 -
21352955-21353080,21353164-21353357,21353815-21353973,
21354117-21354242,21354502-21354704,21354892-21355019,
21355323-21355565,21356734-21356928
Length = 457
Score = 56.8 bits (131), Expect = 1e-08
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Frame = +3
Query: 84 NSVDNEIKASALDLIGNTPIVALDRLHPGPG---RILAKCEFMNPGASIKCRSSLCMIKK 254
+S + I ++ LIG TP+V + + G R++ K E P S+K RS+L MI+
Sbjct: 134 SSREENIASNITQLIGWTPLVEMKNIAKNEGVQARLVGKMEAYQPLCSVKDRSALRMIED 193
Query: 255 ALASGELKPK-EPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKC 431
A G + P ++E TSGN G GL +V G+ M S + + + LGA+
Sbjct: 194 AEEKGLITPGVTTLIEPTSGNLGIGLVLVAVQKGYRFIAVMPAKYSLDKQMLLRFLGAEL 253
Query: 432 VRVPQVEGTYG 464
+ G G
Sbjct: 254 ILTDPAIGFNG 264
>06_03_0486 -
21344680-21344805,21344922-21345115,21350027-21350185,
21350428-21350553,21350784-21350986,21351169-21351296,
21351631-21351741
Length = 348
Score = 54.0 bits (124), Expect = 8e-08
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Frame = +3
Query: 93 DNEIKASALDLIGNTPIVALDRLHPGPG---RILAKCEFMNPGASIKCRSSLCMIKKALA 263
+ I ++ LIG TP++ + + G R++ K E P S+K R++L M++ A
Sbjct: 28 EEAIASNVAQLIGWTPLIEMKNIAKKEGIQARLVGKMEAYQPLFSVKDRTALGMVEDAEE 87
Query: 264 SGELKPK-EPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRV 440
G + P ++E T GN G GL +V G+ M G S + + + LGA+ +
Sbjct: 88 KGLITPGVTTLIEPTGGNLGTGLVLVAIQRGYRFIAVMPAGYSLDKQMLLRFLGAEVILT 147
Query: 441 PQVEGTYG 464
G G
Sbjct: 148 DPAGGFKG 155
>06_03_0491 -
21383036-21383161,21383246-21383439,21383627-21383785,
21383904-21384029,21384290-21384492,21384691-21384818,
21385691-21385783
Length = 342
Score = 53.6 bits (123), Expect = 1e-07
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Frame = +3
Query: 93 DNEIKASALDLIGNTPIVALDRLHPGPG---RILAKCEFMNPGASIKCRSSLCMIKKALA 263
+ I ++ LIG TP++ + + G R++ K E P S+K R++L MI+ A
Sbjct: 22 EETIASNIAQLIGWTPLIEMKNIPKKEGIQTRLIGKMETYQPLFSVKDRTALSMIEDAEE 81
Query: 264 SGELKPK-EPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRV 440
G + P ++E TSGN G GL +V G+ M S + + + LGA+ +
Sbjct: 82 KGLITPGVTTLIEPTSGNLGIGLVLVAIQKGYRFIAVMPARYSPDKQMLLRFLGAELILT 141
Query: 441 PQVEGTYG 464
G G
Sbjct: 142 DPAGGYKG 149
>06_03_0488 -
21361131-21361226,21361922-21362124,21362252-21362410,
21362694-21362813,21365602-21365801,21366243-21366286
Length = 273
Score = 40.7 bits (91), Expect = 8e-04
Identities = 33/106 (31%), Positives = 51/106 (48%)
Frame = +3
Query: 243 MIKKALASGELKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALG 422
MI+ A G + P + ++E TSGN G GLA V G+ + + ++ LG
Sbjct: 16 MIEDAEKRGSISPGDTLIEATSGNLGIGLAAVAIQKGYKFIAVIPNSYPPDKQKLIKYLG 75
Query: 423 AKCVRVPQVEGTYGNVTLNDVKAVEEVGLRIVKETGAYYVNQFNND 560
A+ VR+ EG Y N+ K VEE+ I +Y ++Q N+
Sbjct: 76 AE-VRI--TEGPYRNME----KKVEELKKSI---KNSYNLDQMVNE 111
>04_04_0753 -
27797298-27797547,27797765-27797951,27798040-27798113,
27798719-27798949,27799047-27799133,27799244-27799434
Length = 339
Score = 37.1 bits (82), Expect = 0.010
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 1/154 (0%)
Frame = +3
Query: 99 EIKASALDLIGNTPIVALDRLHPGPGR-ILAKCEFMNPGASIKCRSSLCMIKKALASGEL 275
E +A + TP+++ + G+ + KCE + K R + I A +
Sbjct: 26 EAQARIAPYVHKTPVLSSTSIDAIVGKQLFFKCECFQKAGAFKIRGASNSI---FALDDD 82
Query: 276 KPKEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVEG 455
+ + VV +SGN +A+ + G P + + + A + +++ G +
Sbjct: 83 EASKGVVTHSSGNHAAAVALAAKLRGIPAYIVIPRNAPACKVDNVKRYGGHII------- 135
Query: 456 TYGNVTLNDVKAVEEVGLRIVKETGAYYVNQFNN 557
+ +V+ +++ E V R+ +ETGA V+ FNN
Sbjct: 136 -WSDVS---IESRESVAKRVQEETGAILVHPFNN 165
>06_01_0359 +
2578179-2578291,2578950-2579152,2579319-2579444,
2579742-2579900,2580058-2580251,2580382-2580507
Length = 306
Score = 31.1 bits (67), Expect = 0.63
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 243 MIKKALASGELKPK-EPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEAL 419
MI+ A G + P +VE TSGN G GL +V G+ M S + I ++ +
Sbjct: 39 MIEDAEEKGLITPGVTTLVEPTSGNLGLGLVLVALRKGYRFVAVMPGQYSFDKQILLKYM 98
Query: 420 GAK 428
GA+
Sbjct: 99 GAE 101
>02_04_0363 +
22369461-22370127,22370240-22370310,22370412-22370978,
22371056-22371301
Length = 516
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 287 ASCGSDIGKSRMWARRRVCCIGSSANACHVKRKQCSKGH 403
A+C D+GK R A R+VC IG+ R+ +GH
Sbjct: 2 AACVDDVGKPR--ASRKVCVIGAGMAGLAAARELRREGH 38
>02_05_0577 -
30100084-30100251,30100474-30100548,30100631-30100755,
30101538-30101609,30102016-30102108,30102333-30102419,
30103049-30103135,30103448-30103522,30104142-30104238
Length = 292
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 431 RKSSASGRHVRKRDFERCKSSGGSRPKNCKGNRRIL 538
RK + G H + DFE+CK SG + C+ ++L
Sbjct: 165 RKKTVEGSHYLQ-DFEKCKKSGTIGSEMCENKAQLL 199
>10_07_0055 -
12424320-12424899,12424978-12425160,12425810-12425958,
12426339-12426518,12426610-12426729,12427240-12427383,
12427613-12427777,12427879-12428184,12428258-12428621,
12428746-12429074
Length = 839
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +2
Query: 380 RKQCSKGHTYGGSRGQMRKSSASGRHVRKRDFERCKSSGGSRPKNCKGNRRI 535
RK S+ GGS R S+ +H RK+ + KS G R K+C + I
Sbjct: 34 RKDKSEKPRKGGSSSSNRPSAEKAKHGRKKSGDGKKSKG--RGKSCHSDSSI 83
>11_05_0059 - 18724619-18725053
Length = 144
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +2
Query: 365 ACHVKRKQC---SKGHTYGGSRGQMRKSSASGRHVRKRD 472
+CH +R+ C S+G + GG R +R+ A +H+ + +
Sbjct: 21 SCHHRRRHCCWWSRGRSRGGDREAVREVGALPKHMMEAE 59
>04_04_0373 -
24785799-24786200,24787979-24788161,24790909-24791170,
24791565-24791656
Length = 312
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +3
Query: 282 KEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRV 440
+E V VT N+G GLA+ + H +T+ ++ ++ + AL A+ + V
Sbjct: 36 RETVAVVTGANRGIGLALAARLGEHGITVVLTARDAERGEAAAAALRARGLHV 88
>03_02_0882 -
12121917-12124446,12124739-12124919,12125057-12125134,
12125731-12125764,12125864-12125975,12126053-12126238,
12126505-12126575
Length = 1063
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2
Query: 404 TYGGSRGQMRKSSASGRHVRKRDFERCKSSGGSRPKNCKGNRRILCESVQQRR 562
T G + +K G+H KRD + GG RP + + R L E+V Q++
Sbjct: 554 TTGITSTNEKKGGLQGQHKEKRDSKVRTDKGGRRPAK-EASTRPLKETVGQKK 605
>03_01_0038 -
340564-341108,341214-341463,341546-341649,341728-343255,
343995-344056,344578-344728
Length = 879
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 380 RKQCSKGHTYGGSRGQMRKSSASGRHVRK--RDFERCKSSGGSRPKNC 517
RKQ S+ HT+GG G+ RH RK RDFE G + C
Sbjct: 37 RKQGSRRHTFGGLSGR--------RHSRKKSRDFEETDEYGEDNIEEC 76
>09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166
Length = 983
Score = 27.9 bits (59), Expect = 5.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 365 ACHVKRKQCSKGHT-YGGSRGQMRKSSASGRHVRKRDFERCKSSGGSRPKNCKGNRR 532
A ++ KGH GSR + + GR RD SGGSRP + +G R+
Sbjct: 219 AVGASEERAPKGHDGASGSRKGDQSTPGGGRASGPRD----GGSGGSRPADARGKRK 271
>02_05_0795 - 31792231-31794780
Length = 849
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 483 HRSKSRFRTCLPLAEL-LRIWPREPPYVWPFEHCFL 379
H + + PL +L + W ++ PY +HCF+
Sbjct: 435 HLANLEYANAAPLVDLSMAFWDQDDPYEMGGDHCFI 470
>02_05_0752 + 31491462-31491921,31492177-31492271,31492346-31492573,
31493070-31493157,31493275-31493326,31493985-31494050,
31494382-31494536,31494633-31494703,31494820-31495017,
31495103-31495144,31496223-31496324,31496514-31496603,
31496708-31496783,31497299-31497395,31497488-31497557,
31497676-31497852,31498156-31498239,31498971-31499093,
31500143-31500226,31500318-31500502,31500592-31500730,
31500841-31500900,31500969-31501040,31501136-31501197,
31501839-31501945,31501984-31502058,31502800-31503248
Length = 1168
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 413 GSRGQMRKSSASGRHVRKRDFERC--KSSGGSRPKN 514
G RG +K + GR +RD E C K SGG+R N
Sbjct: 1061 GERG--KKGNLKGRRQGRRDHEPCLEKGSGGARSFN 1094
>02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715
Length = 1536
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 410 GGSRGQMRKSSASGRHVRKRDFERCKSSGGSRPKNCKGN 526
G S+G+ R+ G KRD +R + + P N KG+
Sbjct: 175 GSSKGKKRERGEQGIDQIKRDRDRTLKTDDTEPGNLKGD 213
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,906,492
Number of Sequences: 37544
Number of extensions: 397122
Number of successful extensions: 1131
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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