Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7n01
(562 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78415-10|CAB01676.2| 341|Caenorhabditis elegans Hypothetical p... 78 5e-15
Z72518-3|CAB63415.2| 704|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z49131-7|CAA88980.3| 704|Caenorhabditis elegans Hypothetical pr... 77 1e-14
AF016425-2|AAB65342.1| 337|Caenorhabditis elegans Hypothetical ... 77 1e-14
U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical pr... 75 5e-14
U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical pr... 75 5e-14
AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical ... 71 6e-13
Z83236-2|CAB05778.1| 337|Caenorhabditis elegans Hypothetical pr... 70 1e-12
AF077539-2|AAK84579.2| 427|Caenorhabditis elegans Hypothetical ... 56 1e-08
Z81054-11|CAB02888.1| 430|Caenorhabditis elegans Hypothetical p... 49 2e-06
Z70683-7|CAA94593.1| 430|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z70683-3|CAA94589.1| 435|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 30 1.3
Z81047-11|CAB02837.1| 226|Caenorhabditis elegans Hypothetical p... 29 2.3
AL032663-7|CAA21763.1| 226|Caenorhabditis elegans Hypothetical ... 29 2.3
AF039046-12|AAB94215.1| 299|Caenorhabditis elegans Hydroxy-acyl... 29 2.3
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 29 3.0
U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily ass... 28 4.0
Z81073-6|CAN86904.2| 215|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81073-5|CAE17804.3| 242|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z34800-2|CAA84324.2| 842|Caenorhabditis elegans Hypothetical pr... 27 9.2
AC006672-1|AAK84544.1| 305|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z78415-10|CAB01676.2| 341|Caenorhabditis elegans Hypothetical
protein C17G1.7 protein.
Length = 341
Score = 77.8 bits (183), Expect = 5e-15
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 3/134 (2%)
Frame = +3
Query: 96 NEIKASALDLIGNTPIVALDRLHPG-PGRILAKCEFMNPGASIKCRSSLCMIKKALASGE 272
N I +A LIGNTP+V +++L G PG + K E+MNP S+K R M+ A G
Sbjct: 5 NSIGENAAALIGNTPMVYINKLTKGLPGTVAVKIEYMNPAGSVKDRIGAAMLAAAEKDGT 64
Query: 273 LKP-KEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQV 449
+ P ++E TSGN G LA V A G+ + M S +R ++A G++ V
Sbjct: 65 VIPGVTTLIEPTSGNTGIALAFVAAAKGYRCIVTMPASMSGERRTLLKAYGSEVVLTDPA 124
Query: 450 EGTYGNVTL-NDVK 488
+G G + + N +K
Sbjct: 125 KGMKGAIDMANQLK 138
>Z72518-3|CAB63415.2| 704|Caenorhabditis elegans Hypothetical
protein ZC373.1 protein.
Length = 704
Score = 76.6 bits (180), Expect = 1e-14
Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Frame = +3
Query: 111 SALDLIGNTPIVALDRLHPGPG---RILAKCEFMNPGASIKCRSSLCMI---KKALASGE 272
+ LD IG TP+V L + G + KCE+MN G S K R + M+ +K G+
Sbjct: 381 TVLDAIGKTPLVKLQHIPKAHGVKCNVYVKCEYMNAGGSTKDRIAKRMVEIAEKTGKPGK 440
Query: 273 LKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVE 452
L P ++E TSGN G GL++ AV G+ + M K S +++I M +LG+ +R P
Sbjct: 441 LVPGVTLIEPTSGNTGIGLSLASAVRGYKCIITMPKKMSKEKSIAMASLGSTIIRTPNEA 500
Query: 453 G 455
G
Sbjct: 501 G 501
>Z49131-7|CAA88980.3| 704|Caenorhabditis elegans Hypothetical
protein ZC373.1 protein.
Length = 704
Score = 76.6 bits (180), Expect = 1e-14
Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Frame = +3
Query: 111 SALDLIGNTPIVALDRLHPGPG---RILAKCEFMNPGASIKCRSSLCMI---KKALASGE 272
+ LD IG TP+V L + G + KCE+MN G S K R + M+ +K G+
Sbjct: 381 TVLDAIGKTPLVKLQHIPKAHGVKCNVYVKCEYMNAGGSTKDRIAKRMVEIAEKTGKPGK 440
Query: 273 LKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVE 452
L P ++E TSGN G GL++ AV G+ + M K S +++I M +LG+ +R P
Sbjct: 441 LVPGVTLIEPTSGNTGIGLSLASAVRGYKCIITMPKKMSKEKSIAMASLGSTIIRTPNEA 500
Query: 453 G 455
G
Sbjct: 501 G 501
>AF016425-2|AAB65342.1| 337|Caenorhabditis elegans Hypothetical
protein F59A7.9 protein.
Length = 337
Score = 76.6 bits (180), Expect = 1e-14
Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
Frame = +3
Query: 120 DLIGNTPIVALDRLHPG-PGRILAKCEFMNPGASIKCRSSLCMIKKALASGELKP-KEPV 293
D +GNTP+V L + G RI K E++NP S+K R + M+ A +G++ P K +
Sbjct: 12 DTVGNTPLVLLRNITKGLDARIAVKIEYLNPSCSVKDRIAKTMVDDAEKAGKIVPGKTVL 71
Query: 294 VEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVEGTYGNVT 473
VE TSGN G LA + + G+ + L M+ S +R + A GA+ + EG G
Sbjct: 72 VEGTSGNLGIALAHIGRIRGYKVILVMTTAMSIERRAMLRAYGAEVILSDPAEGHPG--- 128
Query: 474 LNDVKAVEEVGLRIVKETGAYYVNQFNN 557
V+++ + + K AY ++QF+N
Sbjct: 129 -----IVKKIEMLVSKLPDAYCLDQFSN 151
>U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical
protein R08E5.2c protein.
Length = 304
Score = 74.5 bits (175), Expect = 5e-14
Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
Frame = +3
Query: 120 DLIGNTPIVALDRLHPG-PGRILAKCEFMNPGASIKCRSSLCMIKKALASGELKP-KEPV 293
D IGNTP+V L + G RI K E++NP S+K R + M+ +A +G + P K +
Sbjct: 12 DTIGNTPLVLLRNISKGLDARIAVKVEYLNPSCSVKDRIAKSMVDEAEKAGTIVPGKTVL 71
Query: 294 VEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVEGTYGNVT 473
VE TSGN G LA + + G+ + L M S +R + A GA+ + EG G
Sbjct: 72 VEGTSGNLGIALAHIGKIRGYKVILVMPATMSVERRAMLRAYGAEVILSDPAEGHPG--- 128
Query: 474 LNDVKAVEEVGLRIVKETGAYYVNQFNN 557
+++V + + K A+ ++QF+N
Sbjct: 129 -----VIKKVEMLVDKLPNAHCLDQFSN 151
>U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical
protein R08E5.2a protein.
Length = 337
Score = 74.5 bits (175), Expect = 5e-14
Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
Frame = +3
Query: 120 DLIGNTPIVALDRLHPG-PGRILAKCEFMNPGASIKCRSSLCMIKKALASGELKP-KEPV 293
D IGNTP+V L + G RI K E++NP S+K R + M+ +A +G + P K +
Sbjct: 12 DTIGNTPLVLLRNISKGLDARIAVKVEYLNPSCSVKDRIAKSMVDEAEKAGTIVPGKTVL 71
Query: 294 VEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVEGTYGNVT 473
VE TSGN G LA + + G+ + L M S +R + A GA+ + EG G
Sbjct: 72 VEGTSGNLGIALAHIGKIRGYKVILVMPATMSVERRAMLRAYGAEVILSDPAEGHPG--- 128
Query: 474 LNDVKAVEEVGLRIVKETGAYYVNQFNN 557
+++V + + K A+ ++QF+N
Sbjct: 129 -----VIKKVEMLVDKLPNAHCLDQFSN 151
>AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical
protein F54A3.4 protein.
Length = 755
Score = 70.9 bits (166), Expect = 6e-13
Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Frame = +3
Query: 111 SALDLIGNTPIVALDRLHPGPG---RILAKCEFMNPGASIKCRSSLCMIKKALASGE--- 272
S LD IG TP+V L + G + KCEF+N G S K R + M++ A +G+
Sbjct: 339 SVLDAIGKTPLVKLQHVPKAHGVRCNVYVKCEFLNAGGSTKDRIAKKMVEIAEKTGKPGA 398
Query: 273 LKP-KEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQV 449
L P ++E TSGN G GL++V AV G+ + M + S +++ + LG+ VR P
Sbjct: 399 LTPGATTLIEPTSGNTGIGLSLVAAVRGYKCLITMPEKMSKEKSTTLSVLGSTIVRTP-- 456
Query: 450 EGTYGNVTLNDVKAVEEVGLRIVKE-TGAYYVNQFNN 557
N + V LR+ E GA ++Q+ N
Sbjct: 457 ----NEAAFNSPSSHIGVALRLKHEIPGAVILDQYCN 489
>Z83236-2|CAB05778.1| 337|Caenorhabditis elegans Hypothetical
protein K10H10.2 protein.
Length = 337
Score = 70.1 bits (164), Expect = 1e-12
Identities = 52/148 (35%), Positives = 76/148 (51%), Gaps = 2/148 (1%)
Frame = +3
Query: 120 DLIGNTPIVALDRLHPGPGRILA-KCEFMNPGASIKCRSSLCMIKKALASGELKP-KEPV 293
+LIGNTP++ L+++ G +A K E+MNP S+K R + MI A +G + P K +
Sbjct: 12 ELIGNTPLLKLNKIGKDLGASIAVKVEYMNPACSVKDRIAFNMIDTAEKAGLITPGKTVL 71
Query: 294 VEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVEGTYGNVT 473
+E TSGN G LA + G+ + L M S +R ++A GA+ + G
Sbjct: 72 IEPTSGNMGIALAYCGKLRGYKVILTMPASMSIERRCLLKAYGAEVILTDPATAVKG--- 128
Query: 474 LNDVKAVEEVGLRIVKETGAYYVNQFNN 557
V+ EE LR V AY +NQF N
Sbjct: 129 --AVQRAEE--LRDV-IPNAYILNQFGN 151
>AF077539-2|AAK84579.2| 427|Caenorhabditis elegans Hypothetical
protein T25D3.3 protein.
Length = 427
Score = 56.4 bits (130), Expect = 1e-08
Identities = 45/149 (30%), Positives = 70/149 (46%)
Frame = +3
Query: 111 SALDLIGNTPIVALDRLHPGPGRILAKCEFMNPGASIKCRSSLCMIKKALASGELKPKEP 290
S +L+G+TPI +D R++ K E + S+K R S ++ AL G +K
Sbjct: 57 SERNLMGSTPIHVIDPPGLPSVRLVFKNESASLTGSLKHRYSWSLMMWALLEGHVKNGTH 116
Query: 291 VVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVEGTYGNV 470
V E +SGN C L +C +LG T A+ Q K R+ + EG V
Sbjct: 117 VFEASSGNTACSLGYMCRLLGLQFT-AVVPDTIEQ---------VKVRRIEEQEGFVVRV 166
Query: 471 TLNDVKAVEEVGLRIVKETGAYYVNQFNN 557
++D + E ++ K TG +++NQF N
Sbjct: 167 PISDRLIIAE---QLAKSTGGFFMNQFKN 192
>Z81054-11|CAB02888.1| 430|Caenorhabditis elegans Hypothetical
protein F01D4.8 protein.
Length = 430
Score = 49.2 bits (112), Expect = 2e-06
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Frame = +3
Query: 126 IGNTPIVALDRLHPG-PGR-ILAKCEFMNPGASIKCRSSLCMIKKALASGELKPKEPVV- 296
+G+TP+V PG P I K E ++ ++K R + ++ A+ G++ K V
Sbjct: 56 MGHTPLVKFSP--PGFPNTDIFFKNETVSATRTLKHRFAWALLLWAIVEGKVTSKTSAVY 113
Query: 297 EVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVEGTYGNVTL 476
+ TSGN G A +C ++G P +S+ ++ ++E G K ++VP T T
Sbjct: 114 DATSGNMGSAEAYMCTLVGIPYFAVVSEECEQEKIDNIEKFGGKVIKVP----TALRTTK 169
Query: 477 NDVKAVEEVGLRIVKETGAYYVNQFN 554
++ A+E G I ++ A +F+
Sbjct: 170 SNEFAIENNGFYINQQKNAALAEEFH 195
>Z70683-7|CAA94593.1| 430|Caenorhabditis elegans Hypothetical
protein F01D4.8 protein.
Length = 430
Score = 49.2 bits (112), Expect = 2e-06
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Frame = +3
Query: 126 IGNTPIVALDRLHPG-PGR-ILAKCEFMNPGASIKCRSSLCMIKKALASGELKPKEPVV- 296
+G+TP+V PG P I K E ++ ++K R + ++ A+ G++ K V
Sbjct: 56 MGHTPLVKFSP--PGFPNTDIFFKNETVSATRTLKHRFAWALLLWAIVEGKVTSKTSAVY 113
Query: 297 EVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVEGTYGNVTL 476
+ TSGN G A +C ++G P +S+ ++ ++E G K ++VP T T
Sbjct: 114 DATSGNMGSAEAYMCTLVGIPYFAVVSEECEQEKIDNIEKFGGKVIKVP----TALRTTK 169
Query: 477 NDVKAVEEVGLRIVKETGAYYVNQFN 554
++ A+E G I ++ A +F+
Sbjct: 170 SNEFAIENNGFYINQQKNAALAEEFH 195
>Z70683-3|CAA94589.1| 435|Caenorhabditis elegans Hypothetical
protein F13B12.4 protein.
Length = 435
Score = 42.7 bits (96), Expect = 2e-04
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 1/145 (0%)
Frame = +3
Query: 126 IGNTPIVALDRLHPGPGRILAKCEFMNPGASIKCRSSLCMIKKALASGELKPKEPVV-EV 302
+G+TP+ I K E ++K R + ++ A+ G++ K V +
Sbjct: 57 MGHTPMTKFSPPGFPNADIFFKNETATATRTLKHRFAWALLLWAITEGKVTSKTSAVYDS 116
Query: 303 TSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVEGTYGNVTLND 482
TSGN G A +C ++ P ++ ++ +E+ G K ++VP V L +
Sbjct: 117 TSGNTGSAEAYMCTLVNVPYYAVVADNLEKEKVKQIESFGGKIIKVP--------VALRN 168
Query: 483 VKAVEEVGLRIVKETGAYYVNQFNN 557
KA E + +Y+NQF N
Sbjct: 169 AKAKE-----FADKNHGFYMNQFGN 188
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 416 SRGQMRKSSASGRHVRKRDFERCKSSGGSR--PKNCKGNRRILCESVQQR 559
SR SS RH ++R R +SS GSR P + +RR C+ ++R
Sbjct: 170 SRSGRTSSSDRDRHSKRRSRSRSRSSSGSRTPPYKSRSSRR-RCKDFEER 218
>Z81047-11|CAB02837.1| 226|Caenorhabditis elegans Hypothetical
protein C41G6.13 protein.
Length = 226
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -1
Query: 535 YAPVSFTILRPTSSTAFTSFKVTFPYVPSTCGTLTHLAPRAS----ICMAL*ALFPFDMA 368
+AP+ ++ + + F PY +T GT +H+ P+ + + P D+A
Sbjct: 65 FAPLKESVTKTPADEEAAHFTHRPPYRHATKGTNSHVTPKDNREVMFTWKILTWKPEDLA 124
Query: 367 SVSG*PNTAHTTASP 323
+VS P+T T A P
Sbjct: 125 AVSKKPHTKGTKAPP 139
>AL032663-7|CAA21763.1| 226|Caenorhabditis elegans Hypothetical
protein Y75B12B.8 protein.
Length = 226
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -1
Query: 535 YAPVSFTILRPTSSTAFTSFKVTFPYVPSTCGTLTHLAPRAS----ICMAL*ALFPFDMA 368
+AP+ ++ + + F PY +T GT +H+ P+ + + P D+A
Sbjct: 65 FAPLKESVTKTPADEEAAHFTHRPPYRHATKGTNSHVTPKDNREVMFTWKILTWKPEDLA 124
Query: 367 SVSG*PNTAHTTASP 323
+VS P+T T A P
Sbjct: 125 AVSKKPHTKGTKAPP 139
>AF039046-12|AAB94215.1| 299|Caenorhabditis elegans
Hydroxy-acyl-coa dehydrogenaseprotein 1 protein.
Length = 299
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 264 SGELKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTL 368
SG PK V +G G G+A VC G+P+ L
Sbjct: 4 SGNENPKPLVAIFGAGMMGSGIAQVCLQAGYPVNL 38
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 499 SSTAFTSFKVTFPYVPSTCG 440
SS++F SF+ +FP +P CG
Sbjct: 90 SSSSFDSFEASFPTIPKFCG 109
>U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily
assigned gene nameprotein 158 protein.
Length = 1003
Score = 28.3 bits (60), Expect = 4.0
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Frame = +3
Query: 15 GITVVNKCLSV*LFSLSCAMANNNSVDNEI-KASALDLIGNTPIVALDRLHPGPGRILAK 191
G N S FSL A ++DN + + +G +VAL P P +L
Sbjct: 363 GTIAANLTTSFVYFSL--AFIFGGAIDNAVLRDKNGQSVGGQMVVAL-LSWPSPWVLLIG 419
Query: 192 CEFMNPGASIKCRSSLCMIKKALASGELKP-KEPVVEVTSGNQ 317
GA+++C S + +A+A E+ P P +VT+ N+
Sbjct: 420 SFLSTFGAALQCLCSAPRLLQAIAKDEVIPLLSPFKKVTANNE 462
>Z81073-6|CAN86904.2| 215|Caenorhabditis elegans Hypothetical
protein F30F8.10b protein.
Length = 215
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 411 EALGAKCVRVPQVEGTYGNVTLNDV 485
E L C V + GTY NVT DV
Sbjct: 170 EQLADGCTYVKYINGTYTNVTFTDV 194
>Z81073-5|CAE17804.3| 242|Caenorhabditis elegans Hypothetical
protein F30F8.10a protein.
Length = 242
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 411 EALGAKCVRVPQVEGTYGNVTLNDV 485
E L C V + GTY NVT DV
Sbjct: 197 EQLADGCTYVKYINGTYTNVTFTDV 221
>Z34800-2|CAA84324.2| 842|Caenorhabditis elegans Hypothetical
protein F45H7.2a protein.
Length = 842
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 347 IGSSANACHVKRKQCSKGHTYGGSRGQMRKSSASGRHVRKRD 472
+G S ++ R S H YGGS +M S++S H + D
Sbjct: 45 VGGSHHSNTWSRPSGSDHHVYGGSLARMPNSTSSAWHHQMAD 86
>AC006672-1|AAK84544.1| 305|Caenorhabditis elegans Hypothetical
protein K08D12.5 protein.
Length = 305
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 526 VSFTILRPTSSTAFTSFKVTFPYVPSTCGTLTHLAPRASICMAL 395
VS T+LR T+ A F + P P+ C T T++ ++ +L
Sbjct: 164 VSRTVLRNTTKWAVPEFVYSEPVYPTYCSTGTYVLAGKTVPQSL 207
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,015,029
Number of Sequences: 27780
Number of extensions: 320258
Number of successful extensions: 861
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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