Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7m11
         (128 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z36753-2|CAE48510.1|  163|Caenorhabditis elegans Hypothetical pr...    36   0.003
Z36753-1|CAA85340.2|  193|Caenorhabditis elegans Hypothetical pr...    36   0.003
AY962814-1|AAX81435.1|  189|Caenorhabditis elegans calexcitin 2 ...    36   0.003
Z77134-4|CAE17934.1|  148|Caenorhabditis elegans Hypothetical pr...    30   0.20 
Z80216-5|CAB02282.1|  190|Caenorhabditis elegans Hypothetical pr...    29   0.34 
L33681-1|AAA85632.1|  190|Caenorhabditis elegans neuronal calciu...    29   0.34 
U88173-6|AAM15575.1| 1282|Caenorhabditis elegans Hypothetical pr...    28   1.1  
U88173-5|AAM15574.1| 1280|Caenorhabditis elegans Hypothetical pr...    28   1.1  
Z83226-3|CAD21645.1|  218|Caenorhabditis elegans Hypothetical pr...    27   1.4  
AF324053-1|AAK01414.1|  218|Caenorhabditis elegans Ly-6-related ...    27   1.4  
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr...    26   3.2  
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ...    26   3.2  
U29487-1|AAA68768.1|  253|Caenorhabditis elegans 2 (zwei) ig-dom...    26   3.2  
AF456251-1|AAL59609.1|  253|Caenorhabditis elegans secreted 2-im...    26   3.2  
AC006676-5|AAK71383.2|  172|Caenorhabditis elegans Hypothetical ...    25   5.6  
AF036704-1|AAB88560.2|  293|Caenorhabditis elegans Hypothetical ...    25   7.4  
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p...    25   9.8  
U53155-3|AAC48267.3|  492|Caenorhabditis elegans Hypothetical pr...    25   9.8  
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep...    25   9.8  

>Z36753-2|CAE48510.1|  163|Caenorhabditis elegans Hypothetical
           protein T09A5.1b protein.
          Length = 163

 Score = 36.3 bits (80), Expect = 0.003
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +2

Query: 5   KLLHVFTAFFDTNGSGTIDKKDFELAIEXISKSRG 109
           K  H FT FFD + +G I+ KDF+  IE I + RG
Sbjct: 15  KWKHAFTTFFDLDQNGLIEWKDFKDLIEVIGEVRG 49


>Z36753-1|CAA85340.2|  193|Caenorhabditis elegans Hypothetical
           protein T09A5.1a protein.
          Length = 193

 Score = 36.3 bits (80), Expect = 0.003
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +2

Query: 5   KLLHVFTAFFDTNGSGTIDKKDFELAIEXISKSRG 109
           K  H FT FFD + +G I+ KDF+  IE I + RG
Sbjct: 15  KWKHAFTTFFDLDQNGLIEWKDFKDLIEVIGEVRG 49


>AY962814-1|AAX81435.1|  189|Caenorhabditis elegans calexcitin 2
           protein.
          Length = 189

 Score = 36.3 bits (80), Expect = 0.003
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +2

Query: 5   KLLHVFTAFFDTNGSGTIDKKDFELAIEXISKSRG 109
           K  H FT FFD + +G I+ KDF+  IE I + RG
Sbjct: 15  KWKHAFTTFFDLDQNGLIEWKDFKDLIEVIGEVRG 49


>Z77134-4|CAE17934.1|  148|Caenorhabditis elegans Hypothetical
           protein R09H10.6 protein.
          Length = 148

 Score = 30.3 bits (65), Expect = 0.20
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 32  FDTNGSGTIDKKDFELAIEXISKSR 106
           FDTNG GT+ KK++E   + + K +
Sbjct: 74  FDTNGDGTVTKKEYEEYFKRLEKHK 98


>Z80216-5|CAB02282.1|  190|Caenorhabditis elegans Hypothetical
           protein F10G8.5 protein.
          Length = 190

 Score = 29.5 bits (63), Expect = 0.34
 Identities = 16/28 (57%), Positives = 18/28 (64%)
 Frame = +2

Query: 14  HVFTAFFDTNGSGTIDKKDFELAIEXIS 97
           HVF  F DT+ SG ID K+F LAI   S
Sbjct: 69  HVFRTF-DTDNSGFIDFKEFLLAINVTS 95



 Score = 25.4 bits (53), Expect = 5.6
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 32  FDTNGSGTIDKKDFELAIEXISKSRG 109
           +D +G+GTID+K+    IE I +  G
Sbjct: 110 YDIDGNGTIDEKEMIKIIEAIYEMLG 135


>L33681-1|AAA85632.1|  190|Caenorhabditis elegans neuronal calcium
           binding protein protein.
          Length = 190

 Score = 29.5 bits (63), Expect = 0.34
 Identities = 16/28 (57%), Positives = 18/28 (64%)
 Frame = +2

Query: 14  HVFTAFFDTNGSGTIDKKDFELAIEXIS 97
           HVF  F DT+ SG ID K+F LAI   S
Sbjct: 69  HVFRTF-DTDNSGFIDFKEFLLAINVTS 95



 Score = 25.4 bits (53), Expect = 5.6
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 32  FDTNGSGTIDKKDFELAIEXISKSRG 109
           +D +G+GTID+K+    IE I +  G
Sbjct: 110 YDIDGNGTIDEKEMIKIIEAIYEMLG 135


>U88173-6|AAM15575.1| 1282|Caenorhabditis elegans Hypothetical
           protein F46F11.9b protein.
          Length = 1282

 Score = 27.9 bits (59), Expect = 1.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -3

Query: 117 ALQPLDLDIXSMASSKSFLSMVPLPLVSKKAVKTCNN 7
           A Q + LDI  ++S    L++  LP V  +A+KTC +
Sbjct: 53  ASQRIRLDIRDISSDGHLLTLSVLPYVLIQALKTCTD 89


>U88173-5|AAM15574.1| 1280|Caenorhabditis elegans Hypothetical
           protein F46F11.9a protein.
          Length = 1280

 Score = 27.9 bits (59), Expect = 1.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -3

Query: 117 ALQPLDLDIXSMASSKSFLSMVPLPLVSKKAVKTCNN 7
           A Q + LDI  ++S    L++  LP V  +A+KTC +
Sbjct: 53  ASQRIRLDIRDISSDGHLLTLSVLPYVLIQALKTCTD 89


>Z83226-3|CAD21645.1|  218|Caenorhabditis elegans Hypothetical
           protein F43D2.4 protein.
          Length = 218

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -2

Query: 124 ISSTPASRFGYPFNGKFKVLFINGSAAIGVEESGENV 14
           I  TP   +  P++   K+L +   A  GVE SGE +
Sbjct: 15  IPDTPKRSYSNPYDTFVKLLIVVALAPKGVEASGERI 51


>AF324053-1|AAK01414.1|  218|Caenorhabditis elegans Ly-6-related
           protein HOT-1 protein.
          Length = 218

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -2

Query: 124 ISSTPASRFGYPFNGKFKVLFINGSAAIGVEESGENV 14
           I  TP   +  P++   K+L +   A  GVE SGE +
Sbjct: 15  IPDTPKRSYSNPYDTFVKLLIVVALAPKGVEASGERI 51


>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical
           protein K08E7.9 protein.
          Length = 1321

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +2

Query: 2   KKLLHVFTAFFDTNGSGTIDKKDFELAIEXISKSRGWSAGDA 127
           K +L    ++FDTN SGT+  K F+  +E + +  G   G A
Sbjct: 177 KSILRQEISWFDTNHSGTLATKLFD-NLERVKEGTGDKIGMA 217


>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
           protein.
          Length = 1321

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +2

Query: 2   KKLLHVFTAFFDTNGSGTIDKKDFELAIEXISKSRGWSAGDA 127
           K +L    ++FDTN SGT+  K F+  +E + +  G   G A
Sbjct: 177 KSILRQEISWFDTNHSGTLATKLFD-NLERVKEGTGDKIGMA 217


>U29487-1|AAA68768.1|  253|Caenorhabditis elegans 2 (zwei) ig-domain
           protein protein4 protein.
          Length = 253

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -2

Query: 124 ISSTPASRFGYPFNGKFKVLFINGSAAIGVEE 29
           I STPA+   + FNGK     I GS  + VEE
Sbjct: 69  IMSTPAATIHWKFNGK----LIQGSNELNVEE 96


>AF456251-1|AAL59609.1|  253|Caenorhabditis elegans secreted
           2-immunoglobulin-domainprotein ZIG-4 protein.
          Length = 253

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -2

Query: 124 ISSTPASRFGYPFNGKFKVLFINGSAAIGVEE 29
           I STPA+   + FNGK     I GS  + VEE
Sbjct: 69  IMSTPAATIHWKFNGK----LIQGSNELNVEE 96


>AC006676-5|AAK71383.2|  172|Caenorhabditis elegans Hypothetical
           protein M04F3.4 protein.
          Length = 172

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 32  FDTNGSGTIDKKDFELAI 85
           FDT+GSG IDK +   A+
Sbjct: 82  FDTDGSGNIDKSELTNAL 99


>AF036704-1|AAB88560.2|  293|Caenorhabditis elegans Hypothetical
           protein ZK185.3 protein.
          Length = 293

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 21  SPLSSTPMAAEPLIKRTLNLPLXGYPNREAG 113
           +P+ S  ++ EP++KR+L  PL      E G
Sbjct: 252 TPVKSVELSNEPVLKRSLEHPLWEIVKDENG 282


>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
            protein 68 protein.
          Length = 5079

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 32   FDTNGSGTIDKKDFELAIE 88
            FDTN  G I  K+F+ A+E
Sbjct: 4202 FDTNQDGWISPKEFQRAME 4220


>U53155-3|AAC48267.3|  492|Caenorhabditis elegans Hypothetical
           protein ZC513.5 protein.
          Length = 492

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 97  GYPFNGKFKVLFINGSAAIGV 35
           GY  +G+ KV   +G+ AIGV
Sbjct: 189 GYMISGRLKVFGFDGAIAIGV 209


>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
            protein.
          Length = 5071

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 32   FDTNGSGTIDKKDFELAIE 88
            FDTN  G I  K+F+ A+E
Sbjct: 4194 FDTNQDGWISPKEFQRAME 4212


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,825,905
Number of Sequences: 27780
Number of extensions: 33710
Number of successful extensions: 164
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 12,740,198
effective HSP length: 23
effective length of database: 12,101,258
effective search space used: 229923902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)