Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7m11
         (128 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              21   1.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   1.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              19   4.1  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    19   5.5  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    19   5.5  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    19   5.5  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    19   5.5  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    19   7.2  

>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 97  GYPFNGKFKVLFINGSAAIGVEESGEN 17
           GY   G F  + I   A I ++E+G N
Sbjct: 72  GYDDGGNFNEVVIREIAEIFLDENGVN 98


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 126 ASPALQPLDLDIXSMASSKSFLSMV 52
           A+PA QPLDL      S  + +S++
Sbjct: 506 ATPADQPLDLSAKPKNSQDNNISLL 530


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = +2

Query: 26  AFFDTNGSGTIDKKDFELAIEXI 94
           ++ DT+G G ++  +F +A   +
Sbjct: 281 SYDDTDGDGKLNVNEFYMAFSKL 303


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = +1

Query: 19  FHRFLRHQWQRNH 57
           FH  L+  W+++H
Sbjct: 82  FHVMLKLMWEQSH 94


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = -1

Query: 68  PFYQWFRCHW 39
           PF QW+  H+
Sbjct: 108 PFRQWYEGHY 117


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = +2

Query: 35  DTNGSGTIDKKDFELAIEXISKSRG 109
           +TN + T   KD+ + ++ +   +G
Sbjct: 136 NTNNNNTNKYKDYYIWVDPVKDDKG 160


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 68  DFELAIEXISKSRGW 112
           DF LAIE   +++ W
Sbjct: 55  DFGLAIEVQGEAQAW 69


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +2

Query: 11  LHVFTAFFDTNGSGTIDKKDFELAIE 88
           L +FT  F    SGT++  +    I+
Sbjct: 374 LWIFTISFQKYMSGTLNSNETNFRIQ 399


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,314
Number of Sequences: 438
Number of extensions: 305
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 23
effective length of database: 136,269
effective search space used:  2589111
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)