Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7l15
         (664 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0825 + 6233525-6233740,6234274-6234461,6234544-6234668,623...    33   0.27 
11_01_0650 - 5265106-5265305,5265972-5266049,5266391-5266544,526...    31   1.1  
11_01_0649 - 5259038-5259195,5259824-5259887,5260446-5260512,526...    29   2.5  
04_04_0664 - 27066253-27067155,27067242-27067508,27067707-270683...    29   2.5  
01_01_0988 - 7806113-7806193,7806275-7806499,7806589-7806709,780...    29   4.4  
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557...    28   5.8  

>06_01_0825 +
           6233525-6233740,6234274-6234461,6234544-6234668,
           6234858-6234917,6235043-6235074
          Length = 206

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
 Frame = +1

Query: 394 SVVTDWYKGE---LSSAINKV--NNVDVSFVMYYAPWDAESQYVRGEFEK 528
           +V   WY+G+   L+ A+N +  N  D + V++YA W   SQ  R  FEK
Sbjct: 65  AVKFSWYRGDDAILARAVNLLHANKEDFAAVLFYASWCPFSQECRLRFEK 114


>11_01_0650 -
           5265106-5265305,5265972-5266049,5266391-5266544,
           5266635-5266701,5266723-5266796,5266910-5267794
          Length = 485

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 659 WCSQYTQLKWAMMVSYCVTACI 594
           WC  +T+LK  ++  YC  ACI
Sbjct: 304 WCPTFTKLKTLLLNEYCALACI 325


>11_01_0649 -
           5259038-5259195,5259824-5259887,5260446-5260512,
           5260534-5260607,5260725-5261510,5262623-5262685
          Length = 403

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 659 WCSQYTQLKWAMMVSYCVTACI 594
           WC  +T+LK  ++  YC  +CI
Sbjct: 292 WCPTFTKLKTLLLNEYCALSCI 313


>04_04_0664 -
           27066253-27067155,27067242-27067508,27067707-27068368,
           27068479-27069047,27070011-27070108
          Length = 832

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 19/101 (18%), Positives = 47/101 (46%)
 Frame = +1

Query: 145 ANTEDITQVTSLSEKHSTDSDAQNSSENSQVSLQQNNRELTLNMLLKEMVFCVTLALTTY 324
           A+ +++++  ++S     +  A +  EN Q+ L + N+E   + LLKE+  C +  L + 
Sbjct: 626 ADHQEVSRERAISADKLKEQLAASEKENKQLELARLNQEEKNSSLLKELEDCRSKLLESC 685

Query: 325 GALHNTSTKVSKHPQAYKFFGPESVVTDWYKGELSSAINKV 447
             + +   K+  +          SV+ +W +   +  ++ +
Sbjct: 686 KMVQDAVQKLGANVSLPADNSTLSVLANWVEESSTGLVDGI 726


>01_01_0988 -
           7806113-7806193,7806275-7806499,7806589-7806709,
           7807065-7807256,7807884-7807947,7808135-7808261,
           7808338-7808411,7808494-7808598,7808763-7808865,
           7808966-7809028,7809113-7809296,7809788-7809858
          Length = 469

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +1

Query: 310 ALTTYGALHNTSTKVSKHPQAYKFFGPESVVTDWYKGELSSAINKVNNVDVSF 468
           A+  YG + +  T+VS         GP   + +W K  ++SA  K+ NV   F
Sbjct: 220 AILNYGYIFDNCTEVSTSESVIADDGPPQNIIEWLK--ITSACCKIRNVHSIF 270


>03_05_0434 +
           24252994-24253449,24254791-24254877,24255450-24255748,
           24256146-24256383,24256907-24257441,24257527-24257729,
           24258311-24258520
          Length = 675

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 423 LPFVPVSNNRLWSKEFICLWVLG 355
           L FVP  N   W   F C W +G
Sbjct: 329 LEFVPAQNRGTWMVIFSCFWTIG 351


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,296,518
Number of Sequences: 37544
Number of extensions: 325866
Number of successful extensions: 784
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)