Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7l11
(675 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 316 7e-87
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 316 7e-87
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 316 7e-87
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 99 1e-21
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 53 2e-07
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 48 8e-06
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 48 8e-06
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 48 8e-06
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 48 8e-06
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 38 0.009
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 38 0.009
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 31 0.99
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 31 0.99
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 30 1.7
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 30 1.7
Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical pr... 29 3.0
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 5.3
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 5.3
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 5.3
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 316 bits (777), Expect = 7e-87
Identities = 146/186 (78%), Positives = 163/186 (87%)
Frame = +1
Query: 1 IGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNV 180
IGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPGDNVGFNVKNV
Sbjct: 222 IGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNV 281
Query: 181 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEI 360
SVK++RRG V DSK +P K A F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+
Sbjct: 282 SVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNEL 341
Query: 361 KEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAV 540
KEKVDRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAV
Sbjct: 342 KEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAV 401
Query: 541 GVIKAV 558
GVIK+V
Sbjct: 402 GVIKSV 407
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 316 bits (777), Expect = 7e-87
Identities = 146/186 (78%), Positives = 163/186 (87%)
Frame = +1
Query: 1 IGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNV 180
IGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPGDNVGFNVKNV
Sbjct: 256 IGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNV 315
Query: 181 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEI 360
SVK++RRG V DSK +P K A F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+
Sbjct: 316 SVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNEL 375
Query: 361 KEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAV 540
KEKVDRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAV
Sbjct: 376 KEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAV 435
Query: 541 GVIKAV 558
GVIK+V
Sbjct: 436 GVIKSV 441
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 316 bits (777), Expect = 7e-87
Identities = 146/186 (78%), Positives = 163/186 (87%)
Frame = +1
Query: 1 IGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNV 180
IGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPGDNVGFNVKNV
Sbjct: 256 IGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNV 315
Query: 181 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEI 360
SVK++RRG V DSK +P K A F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+
Sbjct: 316 SVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNEL 375
Query: 361 KEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAV 540
KEKVDRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAV
Sbjct: 376 KEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAV 435
Query: 541 GVIKAV 558
GVIK+V
Sbjct: 436 GVIKSV 441
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 99 bits (238), Expect = 1e-21
Identities = 57/184 (30%), Positives = 99/184 (53%), Gaps = 1/184 (0%)
Frame = +1
Query: 10 IGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 189
+GTV +G++E+G ++ G +V P +V + + V GDN+ F +K +
Sbjct: 351 MGTVIIGKMESGCVQKGDTLVVMPNKQPVQVLQIWADDVETERVVAGDNIKFKLKGIEEN 410
Query: 190 ELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEK 369
EL+ G++ S ++ K F A+V+VL H I++GY+ VL +A +
Sbjct: 411 ELQGGFIIC-SPDSLAKTGRVFDAEVLVLEHRSIIASGYSCVLHIQSAVEEVTVKGVIAT 469
Query: 370 VDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVG-V 546
+D++TG+ K +K + I+ L +P +E F+E+P LGRF +RD +T+A+G V
Sbjct: 470 IDKKTGEKKRA--KFVKQDEKCIMRLESPEPFVLEPFKEYPYLGRFTLRDEGKTIAIGKV 527
Query: 547 IKAV 558
+K V
Sbjct: 528 LKVV 531
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Frame = +1
Query: 1 IGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQEAVPGDNVGFN 168
+ G+GT+ G + +G ++ I++ P + + +KS+ + G + F
Sbjct: 383 VDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRMPVGIVKCGQSASFA 442
Query: 169 VKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACK 348
+K + K++R+G V D K P F A+++VL+HP I Y +L +
Sbjct: 443 LKKIPKKDVRKGMVLVDPKVKPVASMV-FEAEILVLHHPTTIKPNYQAMLHIGSVRQTAT 501
Query: 349 FAEIKEKVDRRTGKSTEVNPKSIK 420
+ ++V RTG +V K I+
Sbjct: 502 LVSMGKEV-LRTGDRDKVQFKFIR 524
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 47.6 bits (108), Expect = 8e-06
Identities = 33/178 (18%), Positives = 76/178 (42%), Gaps = 1/178 (0%)
Frame = +1
Query: 28 GRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKE-LRRG 204
G++E+G ++ V+ +++T +++ + GD + ++ E ++ G
Sbjct: 412 GKIESGEVEKDD-KVYIMSSVTAATVKECANNDGSRHCFAGDYILLTLQGTFEPESIQTG 470
Query: 205 YVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRT 384
V + + + F +++ I G L H+ + C F + +++
Sbjct: 471 SVVVRAGPDTLIPSKKFEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSN 530
Query: 385 GKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 558
G+ + P+ I G +A+V + + +E+F LGR R T+A G+++ V
Sbjct: 531 GEILKKGPRFIAKGASAVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 588
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 47.6 bits (108), Expect = 8e-06
Identities = 33/178 (18%), Positives = 76/178 (42%), Gaps = 1/178 (0%)
Frame = +1
Query: 28 GRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKE-LRRG 204
G++E+G ++ V+ +++T +++ + GD + ++ E ++ G
Sbjct: 430 GKIESGEVEKDD-KVYIMSSVTAATVKECANNDGSRHCFAGDYILLTLQGTFEPESIQTG 488
Query: 205 YVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRT 384
V + + + F +++ I G L H+ + C F + +++
Sbjct: 489 SVVVRAGPDTLIPSKKFEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSN 548
Query: 385 GKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 558
G+ + P+ I G +A+V + + +E+F LGR R T+A G+++ V
Sbjct: 549 GEILKKGPRFIAKGASAVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 606
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 47.6 bits (108), Expect = 8e-06
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 6/192 (3%)
Frame = +1
Query: 1 IGGIGTVPVGRVETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPGDNVGF 165
I G GTV G++E G+LK G I + T VKSV E + + +A PGD +G
Sbjct: 262 IVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPGDQLGV 321
Query: 166 NVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 345
++ + K++RRG V + + K AQ+ VL TP+ + + H+
Sbjct: 322 LLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE--SEGGAKTPIANYFSEHVF- 377
Query: 346 KFAEIKEKVDRRTGKSTEVNPKS-IKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 522
+ +G S + K + G++A V L + + +E P RF +R
Sbjct: 378 -------SLTWDSGASVRIIGKDFVMPGESAEVELSLNSQMFIE------PQQRFTIRKG 424
Query: 523 RQTVAVGVIKAV 558
+T+ GV V
Sbjct: 425 AKTIGTGVFTDV 436
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 47.6 bits (108), Expect = 8e-06
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 6/192 (3%)
Frame = +1
Query: 1 IGGIGTVPVGRVETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPGDNVGF 165
I G GTV G++E G+LK G I + T VKSV E + + +A PGD +G
Sbjct: 263 IVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPGDQLGV 322
Query: 166 NVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 345
++ + K++RRG V + + K AQ+ VL TP+ + + H+
Sbjct: 323 LLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE--SEGGAKTPIANYFSEHVF- 378
Query: 346 KFAEIKEKVDRRTGKSTEVNPKS-IKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 522
+ +G S + K + G++A V L + + +E P RF +R
Sbjct: 379 -------SLTWDSGASVRIIGKDFVMPGESAEVELSLNSQMFIE------PQQRFTIRKG 425
Query: 523 RQTVAVGVIKAV 558
+T+ GV V
Sbjct: 426 AKTIGTGVFTDV 437
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 47.6 bits (108), Expect = 8e-06
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 6/192 (3%)
Frame = +1
Query: 1 IGGIGTVPVGRVETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPGDNVGF 165
I G GTV G++E G+LK G I + T VKSV E + + +A PGD +G
Sbjct: 263 IVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPGDQLGV 322
Query: 166 NVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 345
++ + K++RRG V + + K AQ+ VL TP+ + + H+
Sbjct: 323 LLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE--SEGGAKTPIANYFSEHVF- 378
Query: 346 KFAEIKEKVDRRTGKSTEVNPKS-IKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 522
+ +G S + K + G++A V L + + +E P RF +R
Sbjct: 379 -------SLTWDSGASVRIIGKDFVMPGESAEVELSLNSQMFIE------PQQRFTIRKG 425
Query: 523 RQTVAVGVIKAV 558
+T+ GV V
Sbjct: 426 AKTIGTGVFTDV 437
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 37.5 bits (83), Expect = 0.009
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 1 IGGIGTVPVGRVETGVLKPGTIVVFA--PANITTEVKSVEMHHEALQEAVPGDNVGFNVK 174
I G GTV VG +E GVLK G V + T +++ ++++E GD+ G +
Sbjct: 250 ITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQTTASDIQVFGKSVKEVRAGDHCGVLCR 309
Query: 175 NVSVKELRRGYVAG 216
V ++RG AG
Sbjct: 310 GVKGDTVKRGMWAG 323
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 37.5 bits (83), Expect = 0.009
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 1 IGGIGTVPVGRVETGVLKPGTIVVFA--PANITTEVKSVEMHHEALQEAVPGDNVGFNVK 174
I G GTV VG +E GVLK G V + T +++ ++++E GD+ G +
Sbjct: 250 ITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQTTASDIQVFGKSVKEVRAGDHCGVLCR 309
Query: 175 NVSVKELRRGYVAG 216
V ++RG AG
Sbjct: 310 GVKGDTVKRGMWAG 323
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 33.9 bits (74), Expect = 0.11
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Frame = +1
Query: 10 IGTVPVGRVETGVLKPGTIVVFAPANITT----EVKSVEMHHEALQEAVPGDNVGFNVKN 177
+G V G + G L G V+ P T V S+ +A+ PG+ ++
Sbjct: 416 VGQVVGGMLSEGQLHEGADVLVGPMKDGTFEKITVGSIRRSRQAVGCVNPGEAASISLNL 475
Query: 178 VSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 282
LRRG V + + PP +FTA +++L H
Sbjct: 476 PDGVSLRRGMVLAEIDHQPPV-CYEFTANLLLLCH 509
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 30.7 bits (66), Expect = 0.99
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +1
Query: 1 IGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNV 171
I G GTV G V GVL+ T + F N VK++E + + + G F V
Sbjct: 212 IKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKQRVGQVAAGARAAFLV 268
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 30.7 bits (66), Expect = 0.99
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +1
Query: 1 IGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNV 171
I G GTV G V GVL+ T + F N VK++E + + + G F V
Sbjct: 171 IKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKQRVGQVAAGARAAFLV 227
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Frame = -2
Query: 284 GWLSTMT*AVKSAAPLGGLFLESPAT*PRRNSLTDTFFTLKPTLSPGTASWRASW---CI 114
G ST T A S AP GGLF + T P + T F T +P T
Sbjct: 446 GASSTTTPA--STAPTGGLFGAATTTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAAT 503
Query: 113 STDLTSVVMLAGAKTTMVPGFNTPVSTLPTGTVPIP 6
+T + L +T+ + P +T T T+P P
Sbjct: 504 TTTPATAATLGQTPSTVSATPSLPTTTSTTSTLPKP 539
Score = 28.7 bits (61), Expect = 4.0
Identities = 23/81 (28%), Positives = 32/81 (39%)
Frame = -2
Query: 266 T*AVKSAAPLGGLFLESPAT*PRRNSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVM 87
T A +AAP GGLF + T P T F T +P TA+ + T +
Sbjct: 468 TTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAATTTTPATAATLGQTPSTVSATPSLP 527
Query: 86 LAGAKTTMVPGFNTPVSTLPT 24
+ T+ +P P PT
Sbjct: 528 TTTSTTSTLP---KPAEATPT 545
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 52 KPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 177
KPGTI F P ITTE K H L+ + GD +++
Sbjct: 360 KPGTIQWFDPVTITTESKM----HVTLENTIDGDMTSRGIRS 397
>Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical
protein F57B1.9a protein.
Length = 357
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = -2
Query: 674 MKYRSCMKNCAVNSSSYFLPLVAFSAALVTLPPPASLKLTALMTPTATVCLM 519
M Y +C ++N Y L ++A+V LPPP ++ + ++ A C++
Sbjct: 188 MMYNNCRYRYSLNVLHY--ELYCQTSAVVNLPPPKAISIMEIVIQFAIPCII 237
>Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical
protein T23G5.3 protein.
Length = 262
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -2
Query: 620 LPLVAFSAALVTLPPPASLKLTALMTPTATVCLMSRTAKRPRGGNSWKDST 468
+P+V + L PPP L +LM P TV + R K P G NS K T
Sbjct: 129 VPIVPRNLLLSKPPPPPPPPLPSLMQPKDTVQIPMR--KPPTGRNSKKIKT 177
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 316 LDCHTAHIACKFAEIKEKVDRRTGKSTE 399
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 316 LDCHTAHIACKFAEIKEKVDRRTGKSTE 399
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 316 LDCHTAHIACKFAEIKEKVDRRTGKSTE 399
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,943,012
Number of Sequences: 27780
Number of extensions: 353576
Number of successful extensions: 1129
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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