Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7k10
         (633 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF036706-10|AAM97948.1|  633|Caenorhabditis elegans Hypothetical...   299   1e-81
AF036706-9|AAK39281.1|  681|Caenorhabditis elegans Hypothetical ...   299   1e-81
AF036706-11|AAO91698.1|   53|Caenorhabditis elegans Hypothetical...    54   6e-08
AL132853-3|CAB60438.1|  859|Caenorhabditis elegans Hypothetical ...    31   0.91 
Z49888-2|CAA90061.1| 1071|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z93375-3|CAB07565.3|  443|Caenorhabditis elegans Hypothetical pr...    27   8.4  

>AF036706-10|AAM97948.1|  633|Caenorhabditis elegans Hypothetical
           protein T07A9.9b protein.
          Length = 633

 Score =  299 bits (734), Expect = 1e-81
 Identities = 128/184 (69%), Positives = 160/184 (86%)
 Frame = +3

Query: 81  SLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDR 260
           S+YNFK+I  VP A++  D++LSKTQRKTPTVVH+ Y I RIR FY RK+K+ QQ  HD+
Sbjct: 3   SMYNFKRITCVPNAQELKDVVLSKTQRKTPTVVHRQYSIGRIRAFYARKIKFLQQTLHDK 62

Query: 261 LSRIIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGD 440
           L++II EFPK++++HPFY+DLMN+LYD+DHYK+ LGQ+NTARHLID +A++YVRL+KY D
Sbjct: 63  LTQIITEFPKMEEIHPFYSDLMNILYDRDHYKIALGQMNTARHLIDGIAREYVRLMKYAD 122

Query: 441 SLYRCKQLKRAALGRMATIMKRQGANLTYLEQVRQHLARLPSIDPYTRTIIICGFPNVGK 620
           SLYRCK LKRAALGRM  ++KRQ ++  YLEQVRQHL+RLPSIDP TRT+I+CGFPNVGK
Sbjct: 123 SLYRCKMLKRAALGRMVKLLKRQKSSFEYLEQVRQHLSRLPSIDPATRTLILCGFPNVGK 182

Query: 621 SSFI 632
           SSFI
Sbjct: 183 SSFI 186


>AF036706-9|AAK39281.1|  681|Caenorhabditis elegans Hypothetical
           protein T07A9.9a protein.
          Length = 681

 Score =  299 bits (734), Expect = 1e-81
 Identities = 128/184 (69%), Positives = 160/184 (86%)
 Frame = +3

Query: 81  SLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDR 260
           S+YNFK+I  VP A++  D++LSKTQRKTPTVVH+ Y I RIR FY RK+K+ QQ  HD+
Sbjct: 3   SMYNFKRITCVPNAQELKDVVLSKTQRKTPTVVHRQYSIGRIRAFYARKIKFLQQTLHDK 62

Query: 261 LSRIIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGD 440
           L++II EFPK++++HPFY+DLMN+LYD+DHYK+ LGQ+NTARHLID +A++YVRL+KY D
Sbjct: 63  LTQIITEFPKMEEIHPFYSDLMNILYDRDHYKIALGQMNTARHLIDGIAREYVRLMKYAD 122

Query: 441 SLYRCKQLKRAALGRMATIMKRQGANLTYLEQVRQHLARLPSIDPYTRTIIICGFPNVGK 620
           SLYRCK LKRAALGRM  ++KRQ ++  YLEQVRQHL+RLPSIDP TRT+I+CGFPNVGK
Sbjct: 123 SLYRCKMLKRAALGRMVKLLKRQKSSFEYLEQVRQHLSRLPSIDPATRTLILCGFPNVGK 182

Query: 621 SSFI 632
           SSFI
Sbjct: 183 SSFI 186


>AF036706-11|AAO91698.1|   53|Caenorhabditis elegans Hypothetical
           protein T07A9.9c protein.
          Length = 53

 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = +3

Query: 426 LKYGDSLYRCKQLKRAALGRMATIMKRQGANLTYLE 533
           +KY DSLYRCK LKRAALGRM  ++KRQ ++  YL+
Sbjct: 1   MKYADSLYRCKMLKRAALGRMVKLLKRQKSSFEYLK 36


>AL132853-3|CAB60438.1|  859|Caenorhabditis elegans Hypothetical
           protein Y80D3A.7 protein.
          Length = 859

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 23/92 (25%), Positives = 39/92 (42%)
 Frame = +3

Query: 153 TQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDRLSRIIQEFPKLDDVHPFYADLMNV 332
           T   T  + HK    + + G       +  Q+F   + R    FP L  +  F  +++ +
Sbjct: 124 TYPTTELLGHKILLANNLYGVETHPKTHRIQSFSAVILRFFLTFPNLKPMTDFEHEIVKL 183

Query: 333 LYDKDHYKLGLGQLNTARHLIDNVAKDYVRLL 428
           +YD   Y L  GQ+ +     DN+  + VR L
Sbjct: 184 VYDSGKYPLIYGQVAS-----DNLVAEEVRRL 210


>Z49888-2|CAA90061.1| 1071|Caenorhabditis elegans Hypothetical
           protein F47A4.5 protein.
          Length = 1071

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +3

Query: 279 EFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDN 401
           +FPK +     Y D+++   D +H+ +  G++ T  HL+DN
Sbjct: 256 QFPKAELA---YYDIVSTDVDDEHFVIVAGKVTTDEHLMDN 293


>Z93375-3|CAB07565.3|  443|Caenorhabditis elegans Hypothetical
           protein C38C6.5 protein.
          Length = 443

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = +2

Query: 200 KNTWVLY*KSEIYPAELPR---PTVQNYSGIPK 289
           KN  + Y   +I  A  PR   P + NYSGIPK
Sbjct: 196 KNLDIKYSSQQIMKAFTPRFFHPIIANYSGIPK 228


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,965,196
Number of Sequences: 27780
Number of extensions: 318172
Number of successful extensions: 834
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)