Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7k09
         (417 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0263 + 2136858-2137331                                          148   2e-36
12_01_0323 - 2459854-2460306                                          146   5e-36
11_01_0317 - 2365493-2365786,2365825-2365953                          109   9e-25
03_02_0446 - 8567436-8567567,8567649-8567768,8569837-8569914,857...    27   8.0  

>01_01_0263 + 2136858-2137331
          Length = 157

 Score =  148 bits (358), Expect = 2e-36
 Identities = 73/115 (63%), Positives = 92/115 (80%)
 Frame = +1

Query: 1   SHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYX 180
           S +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG YKG++ GKV+QVYR+++V++ 
Sbjct: 23  SSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHV 81

Query: 181 ERIQREKANGATAYVGIHPSKCVIVKLXMNKDRXAILDRXAKGXLAALGXXKGKY 345
           ERI REK NG+T  VGIHPSK V+ KL ++KDR AILDR A+G   A    KGK+
Sbjct: 82  ERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKARG--RAADKAKGKF 134


>12_01_0323 - 2459854-2460306
          Length = 150

 Score =  146 bits (355), Expect = 5e-36
 Identities = 73/115 (63%), Positives = 91/115 (79%)
 Frame = +1

Query: 1   SHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYX 180
           S +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG YKG++ GKV+QVYR+++V++ 
Sbjct: 23  SSVRRVLMSAALSTELRHKYNVRSIPIRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHV 81

Query: 181 ERIQREKANGATAYVGIHPSKCVIVKLXMNKDRXAILDRXAKGXLAALGXXKGKY 345
           ERI REK NG+T  VGIHPSK V+ KL ++KDR AILDR A G   A    KGK+
Sbjct: 82  ERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASG--RAADKAKGKF 134


>11_01_0317 - 2365493-2365786,2365825-2365953
          Length = 140

 Score =  109 bits (262), Expect = 9e-25
 Identities = 62/115 (53%), Positives = 78/115 (67%)
 Frame = +1

Query: 1   SHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYX 180
           S +RRVLMS+ LS ELR K+NV             VRG YKG++ GKV+QVYR+++V++ 
Sbjct: 23  SSVRRVLMSAALSTELRHKYNV-------------VRGSYKGRE-GKVVQVYRRRWVIHV 68

Query: 181 ERIQREKANGATAYVGIHPSKCVIVKLXMNKDRXAILDRXAKGXLAALGXXKGKY 345
           ERI REK NG+T  VGIHPSK V+ KL ++KDR AILDR A G   A    KGK+
Sbjct: 69  ERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASG--RAADKAKGKF 121


>03_02_0446 -
           8567436-8567567,8567649-8567768,8569837-8569914,
           8570018-8570122,8570214-8570306,8570464-8570619
          Length = 227

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 11/49 (22%), Positives = 26/49 (53%)
 Frame = +1

Query: 40  KELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYXER 186
           +EL+Q+ +  ++P   DDE +      + +++       R++FV++  R
Sbjct: 13  EELQQQHDEPAVPSADDDEAEAEENERRNRELKAGFHPLRRRFVLWYTR 61


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,249,457
Number of Sequences: 37544
Number of extensions: 193895
Number of successful extensions: 436
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 754585524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)