Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7k06
(641 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0071 + 548255-548399,548478-548651,548787-548892,548992-54... 63 2e-10
02_05_1230 - 35099942-35100018,35100138-35100221,35100367-351004... 56 2e-08
10_08_0258 + 16261454-16261540,16261636-16261712,16262734-162628... 55 6e-08
09_02_0075 + 3916373-3916400,3916760-3916858,3916943-3917116,391... 53 2e-07
04_04_0021 - 22192869-22192936,22193232-22193298,22193484-221935... 35 0.048
07_03_1269 - 25339970-25340086,25340357-25340416,25341494-253415... 33 0.19
02_01_0725 - 5422477-5422641,5422721-5422792,5422876-5422958,542... 33 0.19
06_01_0673 - 4908496-4908563,4908646-4908712,4908821-4908922,490... 32 0.34
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 31 1.0
05_01_0512 - 4259162-4259849,4260209-4260432,4260854-4261071,426... 30 1.8
07_03_0627 - 20061951-20062391,20062912-20062960,20063386-200638... 29 3.1
03_03_0048 + 14065317-14065433,14065646-14065726,14066566-140669... 29 3.1
12_02_0152 - 14477844-14478085,14478201-14478285 29 4.1
11_01_0655 + 5294905-5296083 29 4.1
05_05_0039 - 21782093-21782320,21782383-21782754,21783031-217834... 29 4.1
05_03_0415 - 13661745-13664240,13664376-13664401,13665018-136650... 29 4.1
02_05_0358 + 28264928-28266049 29 4.1
01_06_0019 + 25620966-25621580 29 4.1
05_03_0184 + 9339939-9340896,9341003-9341083,9341166-9341383,934... 28 5.5
02_04_0323 + 22026866-22027016,22029569-22029949,22030114-22031246 28 5.5
07_03_1513 - 27327702-27328604,27329957-27329995,27330413-273306... 28 7.2
11_03_0128 - 10437407-10438049,10438097-10438272 27 9.6
08_01_0514 + 4481383-4481903,4482532-4484590,4485038-4485107,448... 27 9.6
03_06_0078 + 31505126-31507933 27 9.6
>01_01_0071 +
548255-548399,548478-548651,548787-548892,548992-549130,
549216-549293,549395-549460,550061-550201,550417-550527,
550614-550655,550739-550825,551033-551118,551681-551684
Length = 392
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/121 (28%), Positives = 56/121 (46%)
Frame = +1
Query: 214 KNVVLVDGVRTPFLVSFTDYARMMPHELARHALLGLLQKTGISKDVIDYIVYGTVIQEVK 393
++V +V RTP + + +L A+ L++ + ++ + G V+
Sbjct: 15 RDVCIVGVARTPIGALLGSLSSLPATKLGSVAIQAALRRANVEPALVQEVFMGNVLSANL 74
Query: 394 TSNIGREAALAAGFSDRTPAHTVTMACISSNQAITTGIGMIAAGAYDVIVAGGVEFMSDV 573
R+AAL AG D P TV C S +A+ I G +DV+VAGG+E MS+
Sbjct: 75 GQAPARQAALGAGLPDTVPCTTVNKVCSSGMKAVMLAAQTIQLGMHDVVVAGGMESMSNA 134
Query: 574 P 576
P
Sbjct: 135 P 135
>02_05_1230 -
35099942-35100018,35100138-35100221,35100367-35100475,
35100564-35100687,35101157-35101253,35101375-35101507,
35101654-35101731,35101821-35101928,35102011-35102078,
35102181-35102279,35102379-35102505,35102623-35102707,
35103297-35103373,35103482-35103562
Length = 448
Score = 56.4 bits (130), Expect = 2e-08
Identities = 41/121 (33%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Frame = +1
Query: 211 GKNVVLVDGVRTPFLVSFTD-YARMMPHELARHALLGLLQKTGISKDVIDYIVYGTVIQE 387
G +VV+V RTP + + P +L L +L T I+ I IV GTV+
Sbjct: 46 GDDVVVVAAYRTPICKAKRGGFKDTYPEDLLTVVLKAVLDNTKINPGEIGDIVVGTVLGP 105
Query: 388 VKTSNIG-REAALAAGFSDRTPAHTVTMACISSNQAITTGIGMIAAGAYDVIVAGGVEFM 564
I R AA AG + P TV C S QA+ I AG YD+ + G+E M
Sbjct: 106 GSQRAIECRAAAFYAGVPENVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESM 165
Query: 565 S 567
S
Sbjct: 166 S 166
>10_08_0258 +
16261454-16261540,16261636-16261712,16262734-16262818,
16262931-16263057,16263147-16263245,16263343-16263410,
16263514-16263621,16263727-16263804,16263921-16264053,
16264138-16264234,16264465-16264588,16264668-16264776,
16264899-16264982,16265071-16265180
Length = 461
Score = 54.8 bits (126), Expect = 6e-08
Identities = 42/124 (33%), Positives = 56/124 (45%), Gaps = 2/124 (1%)
Frame = +1
Query: 217 NVVLVDGVRTPFLVSFTDYARMMPHE-LARHALLGLLQKTGISKDVIDYIVYGTVIQEVK 393
+VV+V RT S + P E L L+ KT ++ + IV GTV+
Sbjct: 50 DVVIVAAYRTAICKSKRGGFKDTPAEDLLVPVFKALIDKTKLNPSEVGDIVVGTVLAPGS 109
Query: 394 TSNIG-REAALAAGFSDRTPAHTVTMACISSNQAITTGIGMIAAGAYDVIVAGGVEFMSD 570
I R AA AGF D P TV C S QA+ I AG YD+ +A G+E M+
Sbjct: 110 QRAIECRMAAFYAGFPDTVPLMTVNRQCSSGLQAVANVASNIKAGLYDIGIAAGLESMTV 169
Query: 571 VPIR 582
+R
Sbjct: 170 NQVR 173
>09_02_0075 +
3916373-3916400,3916760-3916858,3916943-3917116,
3917207-3917312,3917671-3917809,3918457-3918534,
3918863-3918928,3919213-3919298,3919939-3920038,
3920245-3920355,3920457-3920498,3920671-3920757,
3921013-3921102
Length = 401
Score = 53.2 bits (122), Expect = 2e-07
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 3/134 (2%)
Frame = +1
Query: 202 DRTGKNVVLVDGV-RTPFLVSFTDYARMMPHELARHALLGLLQKTGISKDVIDYIVYGTV 378
D G V V GV RTP + + +L A+ L++ + ++ + +G V
Sbjct: 4 DNIGSRDVCVVGVARTPMGGFLGALSSLSATKLGSIAIEAALKRANVDPALVQEVFFGNV 63
Query: 379 IQEVKTSNIGREAALAAGFSDRTPAHTVTMACISSNQAITTGIGMIAAGAYDVIVAGGVE 558
+ R+AAL AG + V C S +A I G D++VAGG+E
Sbjct: 64 LSANLGQAPARQAALGAGIPNTVVCSAVNKVCASGMKATMFAAQSILLGINDIVVAGGME 123
Query: 559 FMSDVP--IRHSRK 594
MS+ P I +RK
Sbjct: 124 SMSNAPKYIAEARK 137
>04_04_0021 -
22192869-22192936,22193232-22193298,22193484-22193585,
22193694-22193807,22194156-22194329,22194835-22195266,
22196328-22196759
Length = 462
Score = 35.1 bits (77), Expect = 0.048
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +1
Query: 418 ALAAGFSDRTPAHTVTMACISSNQAITTGIGMIAAGAYDVIVAGGVE 558
A+ AGF P ++++ AC +SN I G DVIVAGG E
Sbjct: 197 AMDAGFMG--PNYSISTACATSNYCFYAAANHIRRGEADVIVAGGTE 241
>07_03_1269 -
25339970-25340086,25340357-25340416,25341494-25341574,
25341647-25341801,25341894-25341978,25342106-25342174,
25342410-25342489,25342620-25342665,25342743-25342838,
25342921-25343031,25343141-25343344,25343430-25343632,
25344495-25344711
Length = 507
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +1
Query: 394 TSNIGREAALAAGFSDRTPAHTVTMACISSNQAITTGIGMIAAGAYDVIVAGGVEFMSDV 573
T+N+G A LA P ++++ AC +SN I I G DV++ GG SD
Sbjct: 233 TTNMG-SAILAMDLGWMGPNYSISTACATSNFCILNAANHIRRGEADVMLCGG----SDA 287
Query: 574 PI 579
P+
Sbjct: 288 PL 289
>02_01_0725 -
5422477-5422641,5422721-5422792,5422876-5422958,
5423113-5423173,5423305-5423381,5423456-5423522,
5423770-5423803,5423894-5423974,5424285-5424436,
5424529-5424615,5425019-5425126,5425906-5426259
Length = 446
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 448 PAHTVTMACISSNQAITTGIGMIAAGAYDVIVAGGVEFMSD-VPIRHSRKMRSLLLRIN 621
P H AC + +I MI G DV+VAGG E D + I ++R+L + N
Sbjct: 185 PNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSIAGFSRLRALSTKYN 243
>06_01_0673 -
4908496-4908563,4908646-4908712,4908821-4908922,
4909006-4909119,4909510-4909683,4909769-4910200,
4910855-4911295
Length = 465
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 397 SNIGREAALAAGFSDRTPAHTVTMACISSNQAITTGIGMIAAGAYDVIVAGGVE 558
+N+G A L P ++++ AC +SN I G DV++AGG E
Sbjct: 192 TNMG-SALLGMDIGFMGPNYSISTACATSNYCFYAAANHIRRGEADVMIAGGTE 244
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 30.7 bits (66), Expect = 1.0
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +1
Query: 319 LLQKTGISKDVIDYIVYGTVIQ-EVKTSNIGREAAL-AAGFSDRTPAHTVTMACISSNQA 492
L K G K V D + ++ E NIG + AA ++ T + + +
Sbjct: 92 LESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGM 151
Query: 493 ITTGIGMIAAGAYDVIVAGGVEFMSDVPIRHSRKM 597
IT G+ ++AAGA V + G+E + + +KM
Sbjct: 152 ITEGVKVVAAGANPVQITRGIEKTAKALVSELQKM 186
>05_01_0512 -
4259162-4259849,4260209-4260432,4260854-4261071,
4261154-4261234,4261342-4262299
Length = 722
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +1
Query: 370 GTVIQEVKTSNIGREAALAAGFSDRTPAHTVTMACISSNQAI-TTG 504
GT ++ S I E++L+ +D++P+H+ +MA S +QA+ +TG
Sbjct: 49 GTALRRYAESEISTESSLSISEADKSPSHS-SMASPSPSQALESTG 93
>07_03_0627 -
20061951-20062391,20062912-20062960,20063386-20063851,
20063933-20064139,20064267-20064405,20065146-20065282,
20065414-20065657,20065808-20065969,20066049-20066167,
20066240-20066314,20066327-20066500,20066607-20066769,
20067211-20067420,20067515-20067668,20067761-20067839,
20067999-20068146,20068501-20068671,20068771-20069385
Length = 1250
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2
Query: 424 PGLPRALYLRFSPLGSRCHIQCSQ*HPSIY 335
P LP Y RF+P+ RC ++ + P+++
Sbjct: 851 PMLPEMQYFRFNPVDERCGMELDETDPAVW 880
>03_03_0048 +
14065317-14065433,14065646-14065726,14066566-14066967,
14067131-14067199,14067278-14067360,14067503-14067555,
14067659-14067780,14068033-14068386,14068479-14068578,
14068663-14068895
Length = 537
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 572 CPSATPARCALCCCGSTAPRP 634
C S TP +L C TAPRP
Sbjct: 164 CSSPTPRAASLACAAPTAPRP 184
>12_02_0152 - 14477844-14478085,14478201-14478285
Length = 108
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 563 CRTCPSATPARCALCCCGST 622
CR C A P+ C L C ST
Sbjct: 71 CRCCSKANPSNCQLTSCSST 90
>11_01_0655 + 5294905-5296083
Length = 392
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +1
Query: 238 VRTPFLVSFTDYARMMPHELARHALLGLLQKTGISKDVIDY 360
V P+++ ++ RM+P RH+++ +L+ G+ KD +D+
Sbjct: 312 VERPWVLGYSLEKRMVP----RHSVMKILRTMGLMKDAVDF 348
>05_05_0039 -
21782093-21782320,21782383-21782754,21783031-21783496,
21784896-21784993,21785179-21785362,21785462-21785574,
21785942-21786127,21786191-21786364
Length = 606
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 542 WRAEWSSCRTCPSATPARCALCCCGST 622
W S+ RT + TP +LCC G T
Sbjct: 426 WHQSTSATRTNSAVTPRALSLCCSGQT 452
>05_03_0415 -
13661745-13664240,13664376-13664401,13665018-13665035,
13665914-13666181,13666531-13666598,13667102-13667243
Length = 1005
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 587 PARCALCCCGSTAP 628
P CAL CCGS+AP
Sbjct: 123 PLPCALACCGSSAP 136
>02_05_0358 + 28264928-28266049
Length = 373
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 576 HPPLPQDALSAAADQPRQDP 635
HPPLP A +AA++ +QDP
Sbjct: 198 HPPLPTAAAAAASNAAQQDP 217
>01_06_0019 + 25620966-25621580
Length = 204
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +2
Query: 545 RAEWSSCRTCPSATPARC-ALCCC 613
R+ SC TC ++ A C ALCCC
Sbjct: 22 RSAAQSCGTCGASAVASCVALCCC 45
>05_03_0184 +
9339939-9340896,9341003-9341083,9341166-9341383,
9341796-9342019,9342409-9343096
Length = 722
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/46 (32%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +1
Query: 370 GTVIQEVKTSNIGREAALAAGFSDRTPAHTVTMACISSNQAI-TTG 504
GT ++ S I E++L+ +D++P+H+ +MA S ++A+ +TG
Sbjct: 49 GTALRRYAESEISPESSLSISEADKSPSHS-SMASPSPSRAVESTG 93
>02_04_0323 + 22026866-22027016,22029569-22029949,22030114-22031246
Length = 554
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = +1
Query: 397 SNIGREAALAAGFSDRTPAHTVTMACISSNQAITTGIGMIAAGAYDVIVAGGVEFM 564
+N G EAA G TV M+C +T G G + G YD+ V GGV M
Sbjct: 8 ANDGEEAAGGGGGGRGEVTFTVVMSC------LTAGAGGLLLG-YDIGVTGGVTQM 56
>07_03_1513 -
27327702-27328604,27329957-27329995,27330413-27330692,
27330772-27330942,27331025-27331857,27331939-27332400,
27332479-27333212,27333301-27333430
Length = 1183
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 410 ARQPWRLGSATGLQRTLSPWLASLLTRQ 493
AR WR+G+ +G+ PW+ + +TR+
Sbjct: 884 ARMIWRVGNVSGIDIWEDPWIPAGVTRR 911
>11_03_0128 - 10437407-10438049,10438097-10438272
Length = 272
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 521 PARMTSSWRAEWSSCRTCPSATPARCALCCCGS 619
P R S+ ++CRTC ATP + C GS
Sbjct: 129 PRRSRSTASTSSTTCRTCCRATPNSTSPCKTGS 161
>08_01_0514 + 4481383-4481903,4482532-4484590,4485038-4485107,
4485434-4485660,4486238-4486324,4486408-4487114,
4487206-4487270,4487323-4487837,4487898-4487991,
4488116-4488398,4488494-4488689,4488913-4489254
Length = 1721
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = +1
Query: 382 QEVKTSNIGREAALAAGFSDRTPAHTVTMACISSNQAITTGIGMIAAGAYDVIVA 546
Q K N+G+E + D + AH ++ C ++ + I + D IVA
Sbjct: 1156 QNWKKVNVGKECSFLKHMGDASSAHNYSVGCFNNLKNSMAQIDKVMVRQSDKIVA 1210
>03_06_0078 + 31505126-31507933
Length = 935
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 49 KKNCPKCRAKMASQVAKSLIKANHVRSTVKFDTARRALS 165
+KN K K+ S++ +S I NHV V FD A R++S
Sbjct: 541 RKNVKKTSPKVLSKLRRSPIPDNHV---VSFDAAVRSVS 576
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,710,764
Number of Sequences: 37544
Number of extensions: 422873
Number of successful extensions: 1336
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1335
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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