Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7k06
         (641 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   4.7  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   6.2  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   6.2  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -1

Query: 482 EEMQAMVTVCAGVLSLNPAARAASRPIF 399
           E  QA+   C G +   P  R   RP++
Sbjct: 261 ELTQAITVACDGTMPRQPPRRQGRRPVY 288


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 216 ECGPCRWSPHSIPCFIHR 269
           EC PC  + +S  CF  R
Sbjct: 338 ECKPCNCNGYSTKCFFDR 355


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 468 HGDSVRWSPVAEPSRQGCLA 409
           H D   W+PV E  R  C+A
Sbjct: 307 HRDVYWWAPVIEELRNECIA 326


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,684
Number of Sequences: 2352
Number of extensions: 13937
Number of successful extensions: 34
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)