BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7k06
(641 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069124-1|AAL39269.1| 469|Drosophila melanogaster GH13256p pro... 239 3e-63
AE013599-3710|AAF47083.1| 469|Drosophila melanogaster CG4581-PA... 239 3e-63
AB010262-1|BAA32690.1| 469|Drosophila melanogaster thiolase pro... 238 4e-63
AB010261-5|BAA32688.1| 469|Drosophila melanogaster thiolase pro... 238 4e-63
AY089548-1|AAL90286.1| 410|Drosophila melanogaster LD24105p pro... 67 2e-11
AE014298-1071|AAF46282.1| 410|Drosophila melanogaster CG10932-P... 67 2e-11
AY089571-1|AAL90309.1| 241|Drosophila melanogaster RE07481p pro... 57 2e-08
AE014296-218|AAF47470.2| 392|Drosophila melanogaster CG9149-PA ... 57 2e-08
BT001769-1|AAN71524.1| 447|Drosophila melanogaster RH10820p pro... 29 4.1
AY060749-1|AAL28297.1| 274|Drosophila melanogaster GH20093p pro... 29 4.1
AE014297-314|AAF51982.1| 438|Drosophila melanogaster CG12170-PA... 29 4.1
X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element prot... 29 5.4
S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein. 29 5.4
AE014298-682|AAF45987.2| 1893|Drosophila melanogaster CG2861-PA,... 29 7.1
BT030452-1|ABP87894.1| 364|Drosophila melanogaster IP17218p pro... 28 9.4
AY119018-1|AAM50878.1| 441|Drosophila melanogaster LP04613p pro... 28 9.4
AE014297-2811|AAF55777.1| 441|Drosophila melanogaster CG10877-P... 28 9.4
>AY069124-1|AAL39269.1| 469|Drosophila melanogaster GH13256p
protein.
Length = 469
Score = 239 bits (584), Expect = 3e-63
Identities = 118/160 (73%), Positives = 135/160 (84%)
Frame = +1
Query: 154 RALSVAPVLQQKKSLPDRTGKNVVLVDGVRTPFLVSFTDYARMMPHELARHALLGLLQKT 333
RALS A Q K + +N+VLVDGVRTPFL S T Y+++MPHELARH+LL LLQK
Sbjct: 25 RALSAAVANPQPKQ---KNSQNIVLVDGVRTPFLTSGTTYSKLMPHELARHSLLSLLQKN 81
Query: 334 GISKDVIDYIVYGTVIQEVKTSNIGREAALAAGFSDRTPAHTVTMACISSNQAITTGIGM 513
+ K++IDYIVYG+VIQEVKTSNI REAALAAGFS++TPAHTVTMACISSN AITTG+G+
Sbjct: 82 RLDKELIDYIVYGSVIQEVKTSNIAREAALAAGFSNKTPAHTVTMACISSNAAITTGMGL 141
Query: 514 IAAGAYDVIVAGGVEFMSDVPIRHSRKMRSLLLRINRAKT 633
IA YDVIVAGGVEFMSDVPIRHSRKMRSLLL+ N+AKT
Sbjct: 142 IATNTYDVIVAGGVEFMSDVPIRHSRKMRSLLLKANKAKT 181
>AE013599-3710|AAF47083.1| 469|Drosophila melanogaster CG4581-PA
protein.
Length = 469
Score = 239 bits (584), Expect = 3e-63
Identities = 118/160 (73%), Positives = 135/160 (84%)
Frame = +1
Query: 154 RALSVAPVLQQKKSLPDRTGKNVVLVDGVRTPFLVSFTDYARMMPHELARHALLGLLQKT 333
RALS A Q K + +N+VLVDGVRTPFL S T Y+++MPHELARH+LL LLQK
Sbjct: 25 RALSAAVANPQPKQ---KNSQNIVLVDGVRTPFLTSGTTYSKLMPHELARHSLLSLLQKN 81
Query: 334 GISKDVIDYIVYGTVIQEVKTSNIGREAALAAGFSDRTPAHTVTMACISSNQAITTGIGM 513
+ K++IDYIVYG+VIQEVKTSNI REAALAAGFS++TPAHTVTMACISSN AITTG+G+
Sbjct: 82 RLDKELIDYIVYGSVIQEVKTSNIAREAALAAGFSNKTPAHTVTMACISSNAAITTGMGL 141
Query: 514 IAAGAYDVIVAGGVEFMSDVPIRHSRKMRSLLLRINRAKT 633
IA YDVIVAGGVEFMSDVPIRHSRKMRSLLL+ N+AKT
Sbjct: 142 IATNTYDVIVAGGVEFMSDVPIRHSRKMRSLLLKANKAKT 181
>AB010262-1|BAA32690.1| 469|Drosophila melanogaster thiolase
protein.
Length = 469
Score = 238 bits (583), Expect = 4e-63
Identities = 118/160 (73%), Positives = 135/160 (84%)
Frame = +1
Query: 154 RALSVAPVLQQKKSLPDRTGKNVVLVDGVRTPFLVSFTDYARMMPHELARHALLGLLQKT 333
RALS A Q K + +N+VLVDGVRTPFL S T Y+++MPHELARH+LL LLQK
Sbjct: 25 RALSAAVANPQPKQ---KNSQNIVLVDGVRTPFLTSGTTYSKLMPHELARHSLLSLLQKK 81
Query: 334 GISKDVIDYIVYGTVIQEVKTSNIGREAALAAGFSDRTPAHTVTMACISSNQAITTGIGM 513
+ K++IDYIVYG+VIQEVKTSNI REAALAAGFS++TPAHTVTMACISSN AITTG+G+
Sbjct: 82 RLDKELIDYIVYGSVIQEVKTSNIAREAALAAGFSNKTPAHTVTMACISSNAAITTGMGL 141
Query: 514 IAAGAYDVIVAGGVEFMSDVPIRHSRKMRSLLLRINRAKT 633
IA YDVIVAGGVEFMSDVPIRHSRKMRSLLL+ N+AKT
Sbjct: 142 IATNTYDVIVAGGVEFMSDVPIRHSRKMRSLLLKANKAKT 181
>AB010261-5|BAA32688.1| 469|Drosophila melanogaster thiolase
protein.
Length = 469
Score = 238 bits (583), Expect = 4e-63
Identities = 118/160 (73%), Positives = 135/160 (84%)
Frame = +1
Query: 154 RALSVAPVLQQKKSLPDRTGKNVVLVDGVRTPFLVSFTDYARMMPHELARHALLGLLQKT 333
RALS A Q K + +N+VLVDGVRTPFL S T Y+++MPHELARH+LL LLQK
Sbjct: 25 RALSAAVANPQPKQ---KNSQNIVLVDGVRTPFLTSGTTYSKLMPHELARHSLLSLLQKK 81
Query: 334 GISKDVIDYIVYGTVIQEVKTSNIGREAALAAGFSDRTPAHTVTMACISSNQAITTGIGM 513
+ K++IDYIVYG+VIQEVKTSNI REAALAAGFS++TPAHTVTMACISSN AITTG+G+
Sbjct: 82 RLDKELIDYIVYGSVIQEVKTSNIAREAALAAGFSNKTPAHTVTMACISSNAAITTGMGL 141
Query: 514 IAAGAYDVIVAGGVEFMSDVPIRHSRKMRSLLLRINRAKT 633
IA YDVIVAGGVEFMSDVPIRHSRKMRSLLL+ N+AKT
Sbjct: 142 IATNTYDVIVAGGVEFMSDVPIRHSRKMRSLLLKANKAKT 181
>AY089548-1|AAL90286.1| 410|Drosophila melanogaster LD24105p
protein.
Length = 410
Score = 66.9 bits (156), Expect = 2e-11
Identities = 38/119 (31%), Positives = 58/119 (48%)
Frame = +1
Query: 220 VVLVDGVRTPFLVSFTDYARMMPHELARHALLGLLQKTGISKDVIDYIVYGTVIQEVKTS 399
VV+V RTP + A + +L A+ ++K GI+K + ++ G V+
Sbjct: 25 VVVVSAARTPIGSFQSQLAPLTATQLGARAIEAAIEKAGIAKTDVQEVIMGNVVSAGLGQ 84
Query: 400 NIGREAALAAGFSDRTPAHTVTMACISSNQAITTGIGMIAAGAYDVIVAGGVEFMSDVP 576
R+AA+ AG TV C S +A+ G + G DV+VAGG+E MS+VP
Sbjct: 85 APARQAAIFAGLPTNVCCTTVNKVCSSGMKAVMLGAQSLMLGYADVVVAGGMESMSNVP 143
>AE014298-1071|AAF46282.1| 410|Drosophila melanogaster CG10932-PA
protein.
Length = 410
Score = 66.9 bits (156), Expect = 2e-11
Identities = 38/119 (31%), Positives = 58/119 (48%)
Frame = +1
Query: 220 VVLVDGVRTPFLVSFTDYARMMPHELARHALLGLLQKTGISKDVIDYIVYGTVIQEVKTS 399
VV+V RTP + A + +L A+ ++K GI+K + ++ G V+
Sbjct: 25 VVVVSAARTPIGSFQSQLAPLTATQLGARAIEAAIEKAGIAKTDVQEVIMGNVVSAGLGQ 84
Query: 400 NIGREAALAAGFSDRTPAHTVTMACISSNQAITTGIGMIAAGAYDVIVAGGVEFMSDVP 576
R+AA+ AG TV C S +A+ G + G DV+VAGG+E MS+VP
Sbjct: 85 APARQAAIFAGLPTNVCCTTVNKVCSSGMKAVMLGAQSLMLGYADVVVAGGMESMSNVP 143
>AY089571-1|AAL90309.1| 241|Drosophila melanogaster RE07481p
protein.
Length = 241
Score = 57.2 bits (132), Expect = 2e-08
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Frame = +1
Query: 217 NVVLVDGVRTPFLVSFTDYARMMPHELARHALLGLLQKTGISKDVIDYIVYGTVIQEVKT 396
+V +V RTP +++ +L + +L++ + ++ ++ G + +
Sbjct: 3 DVFIVSAARTPIGSFNGTLSKLKASDLGSVVIQEVLRRANVEGQEVNEVILGQALSAGQG 62
Query: 397 SNIGREAALAAGFSDRTPAHTVTMACISSNQAITTGIGMIAAGAYDVIVAGGVEFMSDVP 576
N R+A+L AG + PA+ + M C S + + G I +G ++VAGG E MS P
Sbjct: 63 QNPARQASLKAGLPIQVPAYGINMLCGSGLKTVALGYQAIRSGDAQIVVAGGQESMSLAP 122
Query: 577 -IRHSRK 594
+ H R+
Sbjct: 123 HVMHLRQ 129
>AE014296-218|AAF47470.2| 392|Drosophila melanogaster CG9149-PA
protein.
Length = 392
Score = 57.2 bits (132), Expect = 2e-08
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Frame = +1
Query: 217 NVVLVDGVRTPFLVSFTDYARMMPHELARHALLGLLQKTGISKDVIDYIVYGTVIQEVKT 396
+V +V RTP +++ +L + +L++ + ++ ++ G + +
Sbjct: 3 DVFIVSAARTPIGSFNGTLSKLKASDLGSVVIQEVLRRANVEGQEVNEVILGQALSAGQG 62
Query: 397 SNIGREAALAAGFSDRTPAHTVTMACISSNQAITTGIGMIAAGAYDVIVAGGVEFMSDVP 576
N R+A+L AG + PA+ + M C S + + G I +G ++VAGG E MS P
Sbjct: 63 QNPARQASLKAGLPIQVPAYGINMLCGSGLKTVALGYQAIRSGDAQIVVAGGQESMSLAP 122
Query: 577 -IRHSRK 594
+ H R+
Sbjct: 123 HVMHLRQ 129
>BT001769-1|AAN71524.1| 447|Drosophila melanogaster RH10820p
protein.
Length = 447
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 442 RTPAHTVTMACISSNQAITTGIGMIAAGAYDVIVAGGVEFMSD-VPIRHSRKMRSLLLRI 618
R P H+V+ AC + A+ + I +G D+++AG E D + I ++R+L
Sbjct: 186 RGPNHSVSTACATGAHALGDAMRFIRSGDADLMLAGSGEACIDPLSIAGFCRLRALSTAF 245
Query: 619 N 621
N
Sbjct: 246 N 246
>AY060749-1|AAL28297.1| 274|Drosophila melanogaster GH20093p
protein.
Length = 274
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 442 RTPAHTVTMACISSNQAITTGIGMIAAGAYDVIVAGGVEFMSD-VPIRHSRKMRSLLLRI 618
R P H+V+ AC + A+ + I +G D+++AG E D + I ++R+L
Sbjct: 13 RGPNHSVSTACATGAHALGDAMRFIRSGDADLMLAGSGEACIDPLSIAGFCRLRALSTAF 72
Query: 619 N 621
N
Sbjct: 73 N 73
>AE014297-314|AAF51982.1| 438|Drosophila melanogaster CG12170-PA
protein.
Length = 438
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 442 RTPAHTVTMACISSNQAITTGIGMIAAGAYDVIVAGGVEFMSD-VPIRHSRKMRSLLLRI 618
R P H+V+ AC + A+ + I +G D+++AG E D + I ++R+L
Sbjct: 177 RGPNHSVSTACATGAHALGDAMRFIRSGDADLMLAGSGEACIDPLSIAGFCRLRALSTAF 236
Query: 619 N 621
N
Sbjct: 237 N 237
>X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element
protein.
Length = 536
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 518 RPARMTSSWRAEWSSCRTCPSATPARCALC 607
RP R S SSC T P TPA C C
Sbjct: 256 RPPRCMKSAGEHLSSCCTKPRTTPATCVNC 285
>S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein.
Length = 536
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 518 RPARMTSSWRAEWSSCRTCPSATPARCALC 607
RP R S SSC T P TPA C C
Sbjct: 256 RPPRCMKSAGEHLSSCCTKPRTTPATCVNC 285
>AE014298-682|AAF45987.2| 1893|Drosophila melanogaster CG2861-PA,
isoform A protein.
Length = 1893
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 518 RPARMTSSWRAEWSSCRTCPSATPARCALCCCGSTAPRPRR 640
R +SS + WSSC TC +T + C+ C S + + R
Sbjct: 919 RSLSSSSSSSSSWSSCTTC--STCSSCSTCSSSSDSSQSSR 957
>BT030452-1|ABP87894.1| 364|Drosophila melanogaster IP17218p
protein.
Length = 364
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 518 RPARMTSSWRAEWSSCRTCPSATPARC 598
RP SS R +W R+CP T RC
Sbjct: 243 RPPIDLSSARVKWMGNRSCPYTTTCRC 269
>AY119018-1|AAM50878.1| 441|Drosophila melanogaster LP04613p
protein.
Length = 441
Score = 28.3 bits (60), Expect = 9.4
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Frame = -3
Query: 636 RGLGAVDPQQQRAHLAGVADGHVRHELHSARHDDVIR--AGRYHTDTSGDC---LVRRDA 472
R AV + A A +D RH LH R D+ R AG Y T D +++ +
Sbjct: 23 RNFAAVGDKNNAADNANASDVDERHPLHGIRILDLSRIIAGPYCTMVLADLGAEVIKVER 82
Query: 471 SH-GDSVR-WSP 442
H GD R W P
Sbjct: 83 PHFGDEARKWGP 94
>AE014297-2811|AAF55777.1| 441|Drosophila melanogaster CG10877-PA
protein.
Length = 441
Score = 28.3 bits (60), Expect = 9.4
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Frame = -3
Query: 636 RGLGAVDPQQQRAHLAGVADGHVRHELHSARHDDVIR--AGRYHTDTSGDC---LVRRDA 472
R AV + A A +D RH LH R D+ R AG Y T D +++ +
Sbjct: 23 RNFAAVGDKNNAADNANASDVDERHPLHGIRILDLSRIIAGPYCTMVLADLGAEVIKVER 82
Query: 471 SH-GDSVR-WSP 442
H GD R W P
Sbjct: 83 PHFGDEARKWGP 94
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,003,820
Number of Sequences: 53049
Number of extensions: 669045
Number of successful extensions: 2216
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2216
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -