Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7j24
(255 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical p... 54 1e-08
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 29 0.60
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 29 0.60
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 29 0.60
Z48544-2|CAA88437.1| 766|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 25 5.6
AL021171-5|CAE17871.1| 688|Caenorhabditis elegans Hypothetical ... 25 7.4
Z78413-8|CAB01665.2| 541|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z68114-2|CAA92158.1| 463|Caenorhabditis elegans Hypothetical pr... 25 9.8
AF016654-5|AAB66027.1| 348|Caenorhabditis elegans Hypothetical ... 25 9.8
>Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical
protein F25H2.11 protein.
Length = 181
Score = 54.4 bits (125), Expect = 1e-08
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Frame = +1
Query: 10 YTLYLKDYMKKLVAKLEEKAPDQVEV--FKTXXNKVMKDILG--RFKELQFFTGESMDC- 174
+ Y+K +MK ++ +E+ D+ +V FK + +L RFK L FF GE
Sbjct: 88 FKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKIQGWVVSLLAKDRFKNLAFFIGERAAEG 147
Query: 175 --DGMVAMMEYRDFDGTQIPIMMFFKHGL 255
+G VA++EYRD DGT++P +M K +
Sbjct: 148 AENGQVAIIEYRDVDGTEVPTLMLVKEAI 176
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 0.60
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 1 KKSYTLYLKDYMKKLVAKLEEK 66
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 0.60
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 1 KKSYTLYLKDYMKKLVAKLEEK 66
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 0.60
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 1 KKSYTLYLKDYMKKLVAKLEEK 66
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>Z48544-2|CAA88437.1| 766|Caenorhabditis elegans Hypothetical
protein ZK945.3 protein.
Length = 766
Score = 26.2 bits (55), Expect = 3.2
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 1 KKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTXXNKVMKDILGRFKE 141
KK+ L L +K + K+EEKA K+ +K +KD L R K+
Sbjct: 23 KKAKGLKLNKVDRKRIVKIEEKA-----ALKSKVDKAVKDELERLKK 64
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 4 KSYTLYLKDYMKKLVAKLEEKA 69
K Y LYLK+ M KL+A + +++
Sbjct: 456 KDYELYLKEQMTKLLAGMPDES 477
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 4 KSYTLYLKDYMKKLVAKLEEKA 69
K Y LYLK+ M KL+A + +++
Sbjct: 456 KDYELYLKEQMTKLLAGMPDES 477
>AL021171-5|CAE17871.1| 688|Caenorhabditis elegans Hypothetical
protein H04D03.4 protein.
Length = 688
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -1
Query: 243 EKHHDWYLRTIKVSIFHHGNHAITIHRL 160
+K W L+T+K+ + HH +I L
Sbjct: 649 DKSRQWALKTVKIILQHHKREGRSIEDL 676
>Z78413-8|CAB01665.2| 541|Caenorhabditis elegans Hypothetical
protein T01C3.8 protein.
Length = 541
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 198 FHHGNHAITIHRLPSKELKFLKP 130
FH+G H IH P+ E + +P
Sbjct: 97 FHNGEHLFCIHSGPNHEFYYGQP 119
>Z68114-2|CAA92158.1| 463|Caenorhabditis elegans Hypothetical
protein F17A2.3 protein.
Length = 463
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 225 YLRTIKVSIFHHGNHAITIHRLPSKELKFLKPAED 121
Y IK + H NH + H P+K K L+ +ED
Sbjct: 234 YKLNIKTAAIHQVNHQESDHTRPNKS-KDLRSSED 267
>AF016654-5|AAB66027.1| 348|Caenorhabditis elegans Hypothetical
protein C17A2.3 protein.
Length = 348
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 252 TMFEKHHDWYLRT 214
T KH DWYL+T
Sbjct: 173 TSISKHFDWYLKT 185
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,676,032
Number of Sequences: 27780
Number of extensions: 91680
Number of successful extensions: 278
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 277
length of database: 12,740,198
effective HSP length: 63
effective length of database: 10,990,058
effective search space used: 230791218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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