Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7j18
         (460 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical...    31   0.53 
Z81103-7|CAB03211.3|  579|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z81103-5|CAD56592.2|  550|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z81088-12|CAD56587.2|  579|Caenorhabditis elegans Hypothetical p...    29   1.2  
U40029-3|AAA81124.1|  269|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z82284-1|CAB05287.1|  226|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z68748-6|CAD27621.1|   88|Caenorhabditis elegans Hypothetical pr...    27   5.0  
U23139-1|AAK31493.2|  513|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z75711-1|CAB00032.1|  196|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical pr...    27   6.6  
AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain (...    27   6.6  
AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical ...    27   6.6  
Z99284-1|CAB16541.2|  607|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AL032626-18|CAA21543.2|  458|Caenorhabditis elegans Hypothetical...    27   8.7  

>AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical
           protein F35F10.12 protein.
          Length = 471

 Score = 30.7 bits (66), Expect = 0.53
 Identities = 24/64 (37%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = +2

Query: 152 AQPT-VGNGYEPIDNRPYIVNPPKDYN--PNGNGYEPIDNGAYYVDPPQGRPYFKPTPFP 322
           +QPT +G G  P    P  V PP  Y   P  +G    DNGA     P G PY    P P
Sbjct: 351 SQPTPIGGGVAPAGVAPAGVVPPPGYGFLPMTDG---TDNGAGDTPYPVGPPYPSDVPAP 407

Query: 323 GARG 334
              G
Sbjct: 408 YPSG 411


>Z81103-7|CAB03211.3|  579|Caenorhabditis elegans Hypothetical
           protein M04G12.4a protein.
          Length = 579

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +2

Query: 155 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 253
           QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 91  QPLVGNSYDP----PVRFDPPYAYRATATGYMP 119


>Z81103-5|CAD56592.2|  550|Caenorhabditis elegans Hypothetical
           protein M04G12.4b protein.
          Length = 550

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +2

Query: 155 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 253
           QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 62  QPLVGNSYDP----PVRFDPPYAYRATATGYMP 90


>Z81088-12|CAD56587.2|  579|Caenorhabditis elegans Hypothetical
           protein M04G12.4a protein.
          Length = 579

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +2

Query: 155 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 253
           QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 91  QPLVGNSYDP----PVRFDPPYAYRATATGYMP 119


>U40029-3|AAA81124.1|  269|Caenorhabditis elegans Hypothetical
           protein F10G7.6 protein.
          Length = 269

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +2

Query: 179 EPIDNRPYI-VNPPKDYNPNGNGYEPIDNG 265
           EP D  P + V PP  + PN NG  P  NG
Sbjct: 239 EPDDPAPPLPVAPPPLHGPNNNGNGPAQNG 268


>Z82284-1|CAB05287.1|  226|Caenorhabditis elegans Hypothetical
           protein T27E7.1 protein.
          Length = 226

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
 Frame = +2

Query: 158 PTVGNGYEPIDNRPYIVNPPKDYNPNGNGYE--PIDNGAYYVDPPQGRPYFKPT--PFPG 325
           P  G  + P  N   + N P  +     GY   P         PP+G  Y++P   P+  
Sbjct: 36  PQPGASFPP--NMNPVTNGPGSWTQKPGGYNNGPGSGSFKSTKPPRGLVYYQPKNYPYKP 93

Query: 326 ARGGK 340
            +GGK
Sbjct: 94  GKGGK 98


>Z68748-6|CAD27621.1|   88|Caenorhabditis elegans Hypothetical
           protein F13H10.6 protein.
          Length = 88

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = +2

Query: 176 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTP 316
           Y+P +  P     P    P   GY P   G YY    QG PY+   P
Sbjct: 3   YQPYNQPPPYTQQPGYPPPGSAGYVPQ-QGGYYPQGQQG-PYYPQQP 47


>U23139-1|AAK31493.2|  513|Caenorhabditis elegans Hypothetical
           protein F13H8.5 protein.
          Length = 513

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
 Frame = +2

Query: 98  AQDPVKVVENADSADPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNG--AY 271
           AQ P      A +  P    P     + P     Y ++PP+  NP+    E I +G  +Y
Sbjct: 214 AQPPPPPAPPAQTQAPLIRVPPPPARFIPTLKSLYSIDPPRPKNPSYKPDEIIVDGHRSY 273

Query: 272 YVDPPQGRP 298
           + D  + RP
Sbjct: 274 FEDTQRTRP 282


>Z75711-1|CAB00032.1|  196|Caenorhabditis elegans Hypothetical
           protein K02B12.2 protein.
          Length = 196

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 210 ILPKITTLMETATNLSTTVHITWTLPKAD 296
           I+   TT +++ T+LS   + TW LPK D
Sbjct: 19  IVNHYTTHVKSTTDLSKCGNCTWVLPKLD 47


>Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical protein
            C27B7.4 protein.
          Length = 1274

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 239  NGYEPIDNGAYYVDPPQGRPYFKPTPFPGA 328
            NGY   +NG    +P Q  P   P+ FPGA
Sbjct: 1146 NGYPNNNNGGAIGNPQQMLPPRDPSAFPGA 1175


>AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain
            (protein4.1-ezrin-radixin-moesin) family protein 5
            protein.
          Length = 1434

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +2

Query: 134  SADPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNG 265
            SAD  FA+ +V    +P  NRP  + PP   +     Y+ +D G
Sbjct: 926  SADQIFAKMSVSQE-KPAANRPAELPPPAPSSKFAAQYDTVDEG 968


>AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical
            protein Y38C1AB.4 protein.
          Length = 1393

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +2

Query: 134  SADPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNG 265
            SAD  FA+ +V    +P  NRP  + PP   +     Y+ +D G
Sbjct: 885  SADQIFAKMSVSQE-KPAANRPAELPPPAPSSKFAAQYDTVDEG 927


>Z99284-1|CAB16541.2|  607|Caenorhabditis elegans Hypothetical
           protein Y7A9A.1 protein.
          Length = 607

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 80  LLAMANAQDPVKVVENADSADPFFAQPTVGNGYEPIDN 193
           L  +AN+QDPV++  N   AD    +     G   ID+
Sbjct: 255 LRLIANSQDPVQLFYNGSIADGIIREMLANGGIITIDD 292


>AL032626-18|CAA21543.2|  458|Caenorhabditis elegans Hypothetical
           protein Y37D8A.22 protein.
          Length = 458

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +2

Query: 44  IKMKFFMIFVLALLAMANAQDPVKVVENADSADPFFAQP 160
           +KM   M FV+   +  +A++ VK++E   +  P+  QP
Sbjct: 314 VKMHVQMGFVILAFSDHHAENFVKILEKIPAVGPYIRQP 352


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,315,421
Number of Sequences: 27780
Number of extensions: 233560
Number of successful extensions: 661
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)