Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7j16
(695 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132860-18|CAB60498.1| 133|Caenorhabditis elegans Hypothetical... 125 3e-29
AF039048-3|AAK68334.1| 246|Caenorhabditis elegans Hypothetical ... 89 4e-18
U00033-7|AAC48302.2| 145|Caenorhabditis elegans Hypothetical pr... 65 5e-11
U70853-1|AAB09143.2| 439|Caenorhabditis elegans Hypothetical pr... 30 1.4
U29488-4|AAL27235.1| 401|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 29 2.4
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 29 2.4
Z81521-1|CAB04226.1| 319|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z99280-3|CAE18018.1| 215|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z83317-3|CAB05897.1| 217|Caenorhabditis elegans Hypothetical pr... 28 7.3
U40416-1|AAA81410.2| 822|Caenorhabditis elegans Protein kinase ... 28 7.3
AF403714-1|AAK97497.1| 822|Caenorhabditis elegans serine/threon... 28 7.3
AF040655-2|AAB95042.2| 306|Caenorhabditis elegans Serpentine re... 28 7.3
AF024496-1|AAB70339.1| 542|Caenorhabditis elegans Hypothetical ... 28 7.3
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z92831-1|CAB07367.1| 332|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr... 27 9.7
>AL132860-18|CAB60498.1| 133|Caenorhabditis elegans Hypothetical
protein Y56A3A.19 protein.
Length = 133
Score = 125 bits (301), Expect = 3e-29
Identities = 63/125 (50%), Positives = 83/125 (66%)
Frame = +3
Query: 165 RTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGNEKHGIRKYSGGPPLTLDLIKSRVL 344
R +V+ L TV+++ S ++ L IR+YS PLT ++ R++
Sbjct: 3 RVAVSAALRTVSVRA-LSNASVQQRVITPILLSAQKPSFQIRQYSAKAPLTKKTLEERIV 61
Query: 345 LVLQLYDKINPEQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDAERLVRPKDI 524
LVL LYDKI+ ++LT+DS F DLGLDSLDHVEV+MAME+EFGFEIPDGDA+R P+DI
Sbjct: 62 LVLSLYDKIDAKKLTMDSDFSKDLGLDSLDHVEVVMAMEEEFGFEIPDGDADRFKTPRDI 121
Query: 525 VQYIA 539
QYIA
Sbjct: 122 FQYIA 126
>AF039048-3|AAK68334.1| 246|Caenorhabditis elegans Hypothetical
protein F16B4.6 protein.
Length = 246
Score = 88.6 bits (210), Expect = 4e-18
Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +3
Query: 306 PPLTLDLIKSRVL-LVLQLYDKINPEQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEI 482
P L++ V V+ I+ +LT+DS F DLGLD LDHVEV+MA+E+EFGFEI
Sbjct: 161 PEKAAKLLQKEVFRFVIVTSSAISSTKLTMDSDFSTDLGLDFLDHVEVVMAIEEEFGFEI 220
Query: 483 PDGDAERLVRPKDIVQYIA 539
PDGDA+R P+DI+QYIA
Sbjct: 221 PDGDADRFKTPRDILQYIA 239
>U00033-7|AAC48302.2| 145|Caenorhabditis elegans Hypothetical
protein F37C12.3 protein.
Length = 145
Score = 64.9 bits (151), Expect = 5e-11
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Frame = +3
Query: 306 PP--LTLDLIKSRVLLVLQLYDKINPEQ---LTVDSHFMNDLGLDSLDHVEVIMAMEDEF 470
PP LT ++ RVL ++ +D+ ++ L +D+ D G DSLD VE++MA+EDEF
Sbjct: 56 PPKQLTFKQVEDRVLKAVRSWDRFPADKESLLKLDADLSKDFGFDSLDQVEIVMALEDEF 115
Query: 471 GFEIPDGDAERLVRPKDIVQYI 536
GFEIP D+++ +D +YI
Sbjct: 116 GFEIPLQDSDKFKTIRDAFKYI 137
>U70853-1|AAB09143.2| 439|Caenorhabditis elegans Hypothetical
protein M01H9.2 protein.
Length = 439
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1
Query: 193 PLRCSKSSAQLKPLSKYTKVRPFRMGTRNMVSAST 297
P C K A+LKP SK TK P RN + ST
Sbjct: 78 PRLCGKCYAKLKPDSKRTKTIPVTQFKRNPAATST 112
>U29488-4|AAL27235.1| 401|Caenorhabditis elegans Hypothetical
protein C56C10.7a protein.
Length = 401
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 402 FMNDLGLDSLDHVEVI-MAMEDEFGFEIPDGDAERLVRPKDIVQYI 536
F+ + LD H V +A EDEFG D +L++PKDI Q++
Sbjct: 205 FLEKVELDPSQHYNVTSIAHEDEFG------DVGKLLKPKDIRQFL 244
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical protein
W04A8.7 protein.
Length = 1792
Score = 29.5 bits (63), Expect = 2.4
Identities = 25/96 (26%), Positives = 43/96 (44%)
Frame = +3
Query: 222 IKAAVKIYKSQALQNGNEKHGIRKYSGGPPLTLDLIKSRVLLVLQLYDKINPEQLTVDSH 401
+K A KIY + + NG E K + L+K ++ + +L INP + +
Sbjct: 1644 LKDAEKIYTNSVVFNGAESVYSLKAKEMFEMAEMLVKDQMDTLGELERNINPSAINDAAA 1703
Query: 402 FMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDAERLV 509
L +DS DH++ MED E + D + ++
Sbjct: 1704 AQRGLAMDSDDHMD---EMEDHPTEEEEEDDDDEIM 1736
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 29.5 bits (63), Expect = 2.4
Identities = 25/96 (26%), Positives = 43/96 (44%)
Frame = +3
Query: 222 IKAAVKIYKSQALQNGNEKHGIRKYSGGPPLTLDLIKSRVLLVLQLYDKINPEQLTVDSH 401
+K A KIY + + NG E K + L+K ++ + +L INP + +
Sbjct: 1644 LKDAEKIYTNSVVFNGAESVYSLKAKEMFEMAEMLVKDQMDTLGELERNINPSAINDAAA 1703
Query: 402 FMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDAERLV 509
L +DS DH++ MED E + D + ++
Sbjct: 1704 AQRGLAMDSDDHMD---EMEDHPTEEEEEDDDDEIM 1736
>Z81521-1|CAB04226.1| 319|Caenorhabditis elegans Hypothetical
protein F32A11.1 protein.
Length = 319
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 248 KSGPSEWERETWYPQVQRWPS 310
+ G WER+TW VQ +PS
Sbjct: 225 RRGVGVWERDTWVESVQSYPS 245
>Z99280-3|CAE18018.1| 215|Caenorhabditis elegans Hypothetical
protein Y57G11B.7 protein.
Length = 215
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 302 TAVLADTMFLVPILKGLTFVYFDSGFN 222
T ++ TMFL P+ G T VYF G++
Sbjct: 187 TLIICATMFLHPLSMGSTNVYFVPGYH 213
>Z83317-3|CAB05897.1| 217|Caenorhabditis elegans Hypothetical
protein F13G11.2 protein.
Length = 217
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 302 TAVLADTMFLVPILKGLTFVYFDSGFN 222
T ++ TMFL P+ G T VYF G++
Sbjct: 189 TLIICATMFLHPLSMGSTNVYFVPGYH 215
>U40416-1|AAA81410.2| 822|Caenorhabditis elegans Protein kinase
protein 29 protein.
Length = 822
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 201 TQRSKDDMLRTFYTLL--ISVIDHRKHFGKYSQQPFLQAHEMLY 76
T RS DD +R+ L VID K + PF ++HEM+Y
Sbjct: 715 TTRSIDDRVRSIVCTLPFTEVIDELKASLNILKIPFSESHEMVY 758
>AF403714-1|AAK97497.1| 822|Caenorhabditis elegans serine/threonine
kinase KIN-29 protein.
Length = 822
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 201 TQRSKDDMLRTFYTLL--ISVIDHRKHFGKYSQQPFLQAHEMLY 76
T RS DD +R+ L VID K + PF ++HEM+Y
Sbjct: 715 TTRSIDDRVRSIVCTLPFTEVIDELKASLNILKIPFSESHEMVY 758
>AF040655-2|AAB95042.2| 306|Caenorhabditis elegans Serpentine
receptor, class x protein111 protein.
Length = 306
Score = 27.9 bits (59), Expect = 7.3
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 587 FWTSCIFETITNQTQNCIFLIYNWPKSIV 673
F CI +T++N ++L+YN P +++
Sbjct: 42 FHVMCISKTVSNSLHILVYLLYNGPSALL 70
>AF024496-1|AAB70339.1| 542|Caenorhabditis elegans Hypothetical
protein ZC178.1 protein.
Length = 542
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 423 DSLDHVEVIMAMEDEFGFEIPDGDAERLVR 512
+ LD VE++M++ED G + + D+ LVR
Sbjct: 172 EKLDSVELVMSVEDIIGVVLEELDSVELVR 201
>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 156 TTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGN 272
T Y+T V STV++ Q + I +A IYK +GN
Sbjct: 380 TNYKTLVVIIRSTVSMNQNLNAISSA--IYKELTSNDGN 416
>Z92831-1|CAB07367.1| 332|Caenorhabditis elegans Hypothetical
protein F22G12.3 protein.
Length = 332
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -3
Query: 645 KKMQFCVWFVIVSKIQLVQNYEVYIF-FIIHKYLP 544
K++ C F IQLV+NY+V+I F I +Y P
Sbjct: 59 KEIDICPGFDSNPIIQLVRNYDVWIISFGIKRYYP 93
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
F32H2.5 protein.
Length = 2586
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 381 QLTVDSHFMNDLGLDSLDHVEVIMAME 461
QL D++ ++DLGLDSL VE+ A+E
Sbjct: 2207 QLNADAN-LSDLGLDSLMGVEIKQALE 2232
>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 156 TTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGN 272
T Y+T V STV++ Q + I +A IYK +GN
Sbjct: 380 TNYKTLVVIIRSTVSMNQNLNAISSA--IYKELTSNDGN 416
>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 156 TTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGN 272
T Y+T V STV++ Q + I +A IYK +GN
Sbjct: 380 TNYKTLVVIIRSTVSMNQNLNAISSA--IYKELTSNDGN 416
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,563,849
Number of Sequences: 27780
Number of extensions: 306818
Number of successful extensions: 854
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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