Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7j13
(650 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 129 4e-31
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 81 1e-16
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 59 6e-10
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 44 2e-05
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 39 5e-04
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 37 0.002
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 36 0.007
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 32 0.062
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 29 0.58
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 28 1.3
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.3
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 28 1.3
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 27 3.1
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 27 3.1
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 25 7.2
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 25 9.5
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 129 bits (311), Expect = 4e-31
Identities = 67/175 (38%), Positives = 104/175 (59%), Gaps = 1/175 (0%)
Frame = +3
Query: 129 YLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPP 308
+ C +AE V + + +++ +V FYAPWCGHCK L PEY AA L+ D
Sbjct: 17 FFCASAE--VPKVNKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADELEKD--G 72
Query: 309 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSS 488
++L +VDCTE G C ++S+ GYPTL +F+ G+ S+Y+GPR+ + +VKYMR Q+ P+
Sbjct: 73 ISLVEVDCTEEG-DLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQLLPTV 131
Query: 489 KELLTVADFEAFTSK-DEVVVVGFFEKESDLKGEFLKTADKLREEVTFAHSSANE 650
K ++ E F K D++ VV FF K+ L + + A+ ++++ FA S E
Sbjct: 132 KP-ISKDTLENFVEKADDLAVVAFF-KDQKLNDTYTEVAEVMKDDFVFAASDDKE 184
Score = 66.1 bits (154), Expect = 4e-12
Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Frame = +3
Query: 144 AEEDVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALA 320
++ED++ L +F V+ + LV FYAPWCGHCK L P Y A D V +A
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDD-SNVVVA 411
Query: 321 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSS--EYNGPRESNGIVKYM--RAQVGPSS 488
K+D TE S S+SG+PT+ F+ + + Y G R + ++ A P
Sbjct: 412 KIDATENDISV----SISGFPTIMFFKANDKVNPVRYEGDRTLEDLSAFIDKHASFEPIK 467
Query: 489 KE 494
KE
Sbjct: 468 KE 469
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 81.4 bits (192), Expect = 1e-16
Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Frame = +3
Query: 66 KAPAKFKMFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGH 245
+ P F +F + F L+ G+ + ++L +F + +LV+FYAPWCG+
Sbjct: 4 RIPTLFTLFLAC-FSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGY 62
Query: 246 CKRLKPEYAVAAGLLKTDVPPVALAKVDC-TEGGKSTCEQFSVSGYPTLKIF---RKGE- 410
CK+L P Y A L + +P A VDC + ++ C Q+ V G+PT+K+ KG
Sbjct: 63 CKKLVPTYQKLASNLHSLLPVTA---VDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGSS 119
Query: 411 -LSSEYNGPRESNGIVKYMRAQVGPSSKELLT 503
S++YNG R + K++ + PS ++LT
Sbjct: 120 LSSTDYNGDRSYKSLQKFVSDSI-PSKVKILT 150
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 58.8 bits (136), Expect = 6e-10
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Frame = +3
Query: 153 DVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVD 329
+V++L +F V+ LV FYA WCG+CKRL P Y + K + P V + K++
Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNE-PNVEIVKIN 199
Query: 330 CTEGGKSTCEQFSVSGYPTLKIFRKGELSSE--YNGPRESNGIVKYMRAQVG 479
+ V+ +PT+K F K + Y G R +++Y+ + G
Sbjct: 200 -ADVFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEYINKKSG 250
Score = 58.0 bits (134), Expect = 1e-09
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = +3
Query: 210 ALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTL 389
AL+ FYA WCGHCK L P Y G L D V + K+D + +++ ++G+PTL
Sbjct: 42 ALIEFYATWCGHCKSLAPVYE-ELGALFEDHNDVLIGKID-ADTHSDVADKYHITGFPTL 99
Query: 390 KIF-RKGELSSEYNGPRESNGIVKYMRAQVGPSSKELL 500
F G +Y+ R+ + + +++ + G ++++
Sbjct: 100 IWFPPDGSEPVQYSNARDVDSLTQFVSEKTGIKKRKIV 137
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 44.0 bits (99), Expect = 2e-05
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Frame = +3
Query: 165 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDV--PPVALAKVDCTE 338
LTD+D + +S+ T + +Y P CG CKRL P + K V +VDC++
Sbjct: 31 LTDNDLESEVSK-GTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSK 89
Query: 339 GGKSTCEQFSVSGYPTLKIFRKGELSSE--YNGPRESNGIVKYMRAQVGPSSKELLTVAD 512
S+C ++ PTL +++ GE+ E + ++ ++ + P + + +D
Sbjct: 90 -ELSSCA--NIRAVPTLYLYQNGEIVEEVPFGASTSEASLLDFVETHLNPDTDPDIP-SD 145
Query: 513 FEAFTSKD 536
+ T +D
Sbjct: 146 EDVLTDED 153
Score = 40.7 bits (91), Expect = 2e-04
Identities = 30/134 (22%), Positives = 58/134 (43%)
Frame = +3
Query: 171 DSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKS 350
D+D A L+ + + FY+ C C + + A ++ + +A ++C K
Sbjct: 288 DADIDAALTDKEGWFIQFYSSECDDCDDVSTAWYAMANRMRGKLN---VAHINCAVS-KR 343
Query: 351 TCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKELLTVADFEAFTS 530
C+Q+S+ +PT +F K E EY G +V + +E+ + A +
Sbjct: 344 ACKQYSIQYFPTF-LFFKEEAFVEYVGLPNEGDLVSFAEEAANFEIREVELLDTVNAEKN 402
Query: 531 KDEVVVVGFFEKES 572
D V + F++ +S
Sbjct: 403 GD-VFFLYFYDDDS 415
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 39.1 bits (87), Expect = 5e-04
Identities = 22/86 (25%), Positives = 37/86 (43%)
Frame = +3
Query: 174 SDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKST 353
S+F +++ Q +V F+A WCG CK + P++ KVD + +
Sbjct: 9 SEFKSIVCQDKLVVVDFFATWCGPCKAIAPKFE----QFSNTYSDATFIKVDVDQLSEIA 64
Query: 354 CEQFSVSGYPTLKIFRKGELSSEYNG 431
E V P+ +++ GE E G
Sbjct: 65 AEA-GVHAMPSFFLYKNGEKIEEIVG 89
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 37.1 bits (82), Expect = 0.002
Identities = 23/78 (29%), Positives = 35/78 (44%)
Frame = +3
Query: 177 DFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTC 356
D++ +S +V FYA WCG CK LKP L + V+ +
Sbjct: 27 DYNTRISADKVTVVDFYADWCGPCKYLKP----FLEKLSEQNQKASFIAVN-ADKFSDIA 81
Query: 357 EQFSVSGYPTLKIFRKGE 410
++ V PT+ +FRKG+
Sbjct: 82 QKNGVYALPTMVLFRKGQ 99
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 35.5 bits (78), Expect = 0.007
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +3
Query: 225 YAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRK 404
YA WCG CK + P ++ A K P AKV+ E + V PT F
Sbjct: 27 YADWCGPCKAISPLFSQLAS--KYASPKFVFAKVNVDE-QRQIASGLGVKAMPTFVFFEN 83
Query: 405 GE 410
G+
Sbjct: 84 GK 85
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 32.3 bits (70), Expect = 0.062
Identities = 32/123 (26%), Positives = 54/123 (43%)
Frame = -2
Query: 622 TSSLNLSAVFRNSPFRSDSFSKNPTTTTSSLEVKASKSATVRSSLELGPTWARMYLTMPL 443
+SS S++ +S + S + + T+SSL A+ ++ SSL + T
Sbjct: 151 SSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLNSTTSATATS 210
Query: 442 DSLGPLYSEESSPFLNIFSVGYPDTENCSQVLLPPSVQSTLASATGGTSVFNRPAATAYS 263
SL + S+ ++ S T S S+ ST++S+T TS + AAT+ S
Sbjct: 211 SSLSSTAASNSATSSSLASSSLNST--TSATATSSSISSTVSSSTPLTSSNSTTAATSAS 268
Query: 262 GFS 254
S
Sbjct: 269 ATS 271
Score = 27.1 bits (57), Expect = 2.3
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -2
Query: 631 AKVTSSLNLSAVFRNSPFRSDSFSKNPTTTTSSLEVKASKSATVRSSLEL 482
A TSS S NS S S + +TTS+ +S S+TV SS L
Sbjct: 206 ATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPL 255
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 29.1 bits (62), Expect = 0.58
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Frame = -2
Query: 604 SAVFRNSP-FRSDSFSKNPTTTTSSLEVKASKSATVRSSLELGPTWARMYLTMPLDSLGP 428
SA F +SP F S+S S PT+ SS+ S +++ ++L T + +T G
Sbjct: 447 SATFTSSPPFYSNS-SVIPTSAPSSVSSFTSSNSSYTTTL----TASNTTVTFTGTGTGS 501
Query: 427 LYSEESSPFLNIFSVGYPDTENCSQVLLPPSVQSTLASATGGTSVFN 287
+ SSP+ + S+ P T + S + S + S+ GTS +
Sbjct: 502 ATATSSSPYYSNSSIIVPTTVSTSGSVSSFSSSPSPTSSFSGTSALS 548
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 27.9 bits (59), Expect = 1.3
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Frame = -2
Query: 610 NLSAVFRNSPFRSDSFSKN---PTTTTSSLEVKASKSATVRSS-LELGPTWARMYLTMPL 443
N N PF+ S++ N P+ TT ++ S TV S L + +
Sbjct: 263 NFPTTVPNYPFQQPSYNPNALVPSYTTLVSQLPPSPCLTVSSGPLSTASSIPSNCSCPSV 322
Query: 442 DSLGPLYSEESSPFLNIFSVGYPDT 368
S GP Y E +N ++ G P T
Sbjct: 323 KSSGPSYHAEQEVNVNSYNGGIPST 347
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.9 bits (59), Expect = 1.3
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Frame = -2
Query: 622 TSSLNLSAVFRNSPFRSDSFSKNPTTTTSSLEVKA--SKSATVRSSLELGPTWARMYLTM 449
TSS LS+ S S S S + T T+SSL + S S++ S+ + +
Sbjct: 205 TSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTAS 264
Query: 448 PLDSLGPLYSEESSPFLNIFSVGYPDTENCSQVLLPPSVQSTLASATGGTSVFN 287
S + S SS + S + + S P S ST++S++ +S F+
Sbjct: 265 SSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFS 318
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.9 bits (59), Expect = 1.3
Identities = 17/73 (23%), Positives = 29/73 (39%)
Frame = +3
Query: 213 LVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLK 392
L+ FYAPW CK++ + A D K++ E E F V+ P
Sbjct: 24 LLNFYAPWAAPCKQMNQVFDQFA----KDTKNAVFLKIE-AEKFSDIAESFDVNAVPLFV 78
Query: 393 IFRKGELSSEYNG 431
+ ++ + +G
Sbjct: 79 LIHGAKVLARISG 91
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 157 FSILQIPTFRLFYLNMIQPWSCF 225
F LQ+ FR + N+++PW CF
Sbjct: 208 FYCLQLQMFRKMH-NIVRPWDCF 229
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -1
Query: 575 VRFLFE-ESDNHYFILRSKSFKISHCKELLGAGSNLGTHVLDNAIRLPWS 429
+ +L+E E+D YF+ + ++ H + +G NL L A+ LP S
Sbjct: 374 IEYLYEPENDRFYFLELNPRLQVEHPTTEMVSGVNLPAAQLQVAMGLPLS 423
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 25.4 bits (53), Expect = 7.2
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 147 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKT 296
EE V+D+ + D +AVL L + +P+ CK P+ V A +L+T
Sbjct: 324 EEAVIDVDELDKNAVLFGGTRVLQVTQSPF---CKLKTPDNGVPAIVLRT 370
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 123 IIYLCKAAEEDVLDLTDSDFSAVLSQHD 206
+IY C+AA+E++LD LS+ D
Sbjct: 6 LIYACRAADEELLDEIIEKCPQELSRRD 33
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,651,976
Number of Sequences: 5004
Number of extensions: 53954
Number of successful extensions: 193
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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