Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7j09
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 171 3e-43
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 171 3e-43
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 171 5e-43
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 171 5e-43
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 145 2e-35
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 145 2e-35
AF016420-9|AAB65304.1| 410|Caenorhabditis elegans Serpentine re... 29 2.3
Z50874-9|CAA90769.1| 202|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z68115-3|CAA92168.1| 243|Caenorhabditis elegans Hypothetical pr... 28 5.2
U28971-5|AAA68379.1| 982|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF024501-1|AAZ91348.1| 590|Caenorhabditis elegans Hypothetical ... 27 9.1
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 171 bits (417), Expect = 3e-43
Identities = 69/113 (61%), Positives = 90/113 (79%)
Frame = +3
Query: 330 YPKKLVWRNIILFTYLHIAALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAH 509
Y ++VWRN+ LF LH+AA G Y +FHAKWQT +F++ LYV SG GITAGAHRLW+H
Sbjct: 42 YKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWSH 101
Query: 510 KSYKAKWPLRVILIIFNSLAFQDSALDWARDHRMHHKYSETDADPHNATRGFF 668
KSYKA P+R+ L++ N++A Q+ ++WARDHR HHK+++TDADPHN TRGFF
Sbjct: 102 KSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRGFF 154
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 171 bits (417), Expect = 3e-43
Identities = 69/113 (61%), Positives = 90/113 (79%)
Frame = +3
Query: 330 YPKKLVWRNIILFTYLHIAALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAH 509
Y ++VWRN+ LF LH+AA G Y +FHAKWQT +F++ LYV SG GITAGAHRLW+H
Sbjct: 42 YKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWSH 101
Query: 510 KSYKAKWPLRVILIIFNSLAFQDSALDWARDHRMHHKYSETDADPHNATRGFF 668
KSYKA P+R+ L++ N++A Q+ ++WARDHR HHK+++TDADPHN TRGFF
Sbjct: 102 KSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRGFF 154
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 171 bits (415), Expect = 5e-43
Identities = 75/154 (48%), Positives = 104/154 (67%)
Frame = +3
Query: 207 SVK*QTNMAPNVKDANGVLFENDADTPDLGLSSTPVQQADNYPKKLVWRNIILFTYLHIA 386
+VK ++N+A ++ G + A P+ + + Y ++VWRN+ LF LH A
Sbjct: 2 TVKTRSNIAKKIEKDGGPETQYLAVDPNEIIQLQEESKKIPYKMEIVWRNVALFAALHFA 61
Query: 387 ALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSYKAKWPLRVILIIFNSL 566
A G Y +F AKWQT +F ++LYV G GITAGAHRLW+HKSYKA P+R+ L+I N++
Sbjct: 62 AAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMILNNI 121
Query: 567 AFQDSALDWARDHRMHHKYSETDADPHNATRGFF 668
A Q+ ++WARDHR HHK+++TDADPHN TRGFF
Sbjct: 122 ALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFF 155
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 171 bits (415), Expect = 5e-43
Identities = 75/154 (48%), Positives = 104/154 (67%)
Frame = +3
Query: 207 SVK*QTNMAPNVKDANGVLFENDADTPDLGLSSTPVQQADNYPKKLVWRNIILFTYLHIA 386
+VK ++N+A ++ G + A P+ + + Y ++VWRN+ LF LH A
Sbjct: 2 TVKTRSNIAKKIEKDGGPETQYLAVDPNEIIQLQEESKKIPYKMEIVWRNVALFAALHFA 61
Query: 387 ALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSYKAKWPLRVILIIFNSL 566
A G Y +F AKWQT +F ++LYV G GITAGAHRLW+HKSYKA P+R+ L+I N++
Sbjct: 62 AAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMILNNI 121
Query: 567 AFQDSALDWARDHRMHHKYSETDADPHNATRGFF 668
A Q+ ++WARDHR HHK+++TDADPHN TRGFF
Sbjct: 122 ALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFF 155
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 145 bits (352), Expect = 2e-35
Identities = 58/110 (52%), Positives = 81/110 (73%)
Frame = +3
Query: 339 KLVWRNIILFTYLHIAALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSY 518
++VW+N+ LF LHI AL G Y +F AKW T + ++L+ + +G+T GAHRLWAH++Y
Sbjct: 37 EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96
Query: 519 KAKWPLRVILIIFNSLAFQDSALDWARDHRMHHKYSETDADPHNATRGFF 668
KA RV L++ NS+AFQ+ +DWARDHR HHK+++TDADPH+ RG F
Sbjct: 97 KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMF 146
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 145 bits (352), Expect = 2e-35
Identities = 58/110 (52%), Positives = 81/110 (73%)
Frame = +3
Query: 339 KLVWRNIILFTYLHIAALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSY 518
++VW+N+ LF LHI AL G Y +F AKW T + ++L+ + +G+T GAHRLWAH++Y
Sbjct: 37 EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96
Query: 519 KAKWPLRVILIIFNSLAFQDSALDWARDHRMHHKYSETDADPHNATRGFF 668
KA RV L++ NS+AFQ+ +DWARDHR HHK+++TDADPH+ RG F
Sbjct: 97 KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMF 146
>AF016420-9|AAB65304.1| 410|Caenorhabditis elegans Serpentine
receptor, class r protein6 protein.
Length = 410
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/40 (27%), Positives = 26/40 (65%)
Frame = -3
Query: 528 TLLCMIYVPIIYVHLL*CQVLTLHTIYRQIGLFAISHEIR 409
T++ +Y+ +++++LL C ++ + IY + ++S EIR
Sbjct: 187 TVIAPLYIAMVFINLLSCFIVAICLIYYFLVNLSLSREIR 226
>Z50874-9|CAA90769.1| 202|Caenorhabditis elegans Hypothetical
protein R10E4.9 protein.
Length = 202
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/36 (44%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Frame = +3
Query: 348 WRNIILFTY-LHIAALYG-GYLFLFHAKWQTDLFAY 449
++N+ILF Y L + L+G G+L++FHA++ T F Y
Sbjct: 4 FKNMILFIYTLVLFILHGYGFLYIFHAEY-TSEFKY 38
>Z68115-3|CAA92168.1| 243|Caenorhabditis elegans Hypothetical
protein F19H6.4 protein.
Length = 243
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 426 WQTDLFAYILYVMSGLGITAGAHRLWAHKSYKAKWPLRVILI 551
W A+ ++ ++ +G A AH W +++ P R ILI
Sbjct: 198 WNLPALAFAIFTIANIGPRAVAHHKWYKETFPGYPPNRRILI 239
>U28971-5|AAA68379.1| 982|Caenorhabditis elegans Hypothetical protein
B0244.6 protein.
Length = 982
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 410 EKVASIQRSNMKVCKKYYIPPN*FLW 333
EKV S + +K+CKKYY LW
Sbjct: 932 EKVLSETKKQLKMCKKYYAKVLETLW 957
>AF024501-1|AAZ91348.1| 590|Caenorhabditis elegans Hypothetical
protein F39E9.4 protein.
Length = 590
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 555 FNSLAFQDSALDWARDHRMHHKYSETDADPHNATR 659
F L FQ +ALD+ R+ +YS+ + P N R
Sbjct: 524 FGKLYFQVAALDFCAPSRIEERYSDQLSHPTNKFR 558
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,049,550
Number of Sequences: 27780
Number of extensions: 358504
Number of successful extensions: 901
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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