Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7j08
(637 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29613-3|AAC47062.2| 483|Caenorhabditis elegans Hypothetical pr... 45 5e-05
L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical pr... 37 0.011
L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical pr... 37 0.011
U13875-10|AAA21159.1| 332|Caenorhabditis elegans F-box synaptic... 31 0.91
AF040643-6|AAT81200.1| 249|Caenorhabditis elegans Hypothetical ... 30 1.6
Z82282-4|CAB05276.1| 485|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z82282-2|CAB05274.2| 544|Caenorhabditis elegans Hypothetical pr... 29 2.1
U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redunda... 29 2.1
AC006714-11|AAN65282.3| 306|Caenorhabditis elegans F-box a prot... 29 2.8
Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical p... 28 4.9
Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z72507-1|CAA96633.2| 172|Caenorhabditis elegans Hypothetical pr... 28 6.4
AL032647-5|CAA21693.1| 370|Caenorhabditis elegans Hypothetical ... 27 8.5
>U29613-3|AAC47062.2| 483|Caenorhabditis elegans Hypothetical
protein K02A6.3a protein.
Length = 483
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +3
Query: 435 ELLALIFERLPVRDRGRAAQVCRAWRDAADRRSVWR 542
ELL IF+RLPV+++GR +QVCR W+ + + WR
Sbjct: 13 ELLEDIFQRLPVKNKGRCSQVCRQWQRGFNSKLSWR 48
>L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical
protein C02F5.7a protein.
Length = 461
Score = 37.1 bits (82), Expect = 0.011
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 393 PTEPQGTHISRLYP-ELLALIFERLPVRDRGRAAQVCRAWRDAADRRSVWRGVKAALHLR 569
P + + I+R+ P E+L +F L + R+AQVCR+W A S W+ V R
Sbjct: 48 PAQVDNSLINRVLPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQRVDLFTFQR 107
Query: 570 RPAPVLFASLARR 608
+ +LARR
Sbjct: 108 DVKTAVVENLARR 120
>L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical
protein C02F5.7b protein.
Length = 466
Score = 37.1 bits (82), Expect = 0.011
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 393 PTEPQGTHISRLYP-ELLALIFERLPVRDRGRAAQVCRAWRDAADRRSVWRGVKAALHLR 569
P + + I+R+ P E+L +F L + R+AQVCR+W A S W+ V R
Sbjct: 48 PAQVDNSLINRVLPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQRVDLFTFQR 107
Query: 570 RPAPVLFASLARR 608
+ +LARR
Sbjct: 108 DVKTAVVENLARR 120
>U13875-10|AAA21159.1| 332|Caenorhabditis elegans F-box synaptic
protein protein 1 protein.
Length = 332
Score = 30.7 bits (66), Expect = 0.91
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 360 PHLPSAHVSEPPTEPQGTHISRLYPELLALIFERLPVRDRGRAAQVCRAWRDA 518
PH P P+ SRL ++L IF+ LP++D A C +W +A
Sbjct: 64 PHSIPPRRRRSPRRPE-VSASRLPLKVLNQIFQYLPLKDLRSAMLTCHSWNNA 115
>AF040643-6|AAT81200.1| 249|Caenorhabditis elegans Hypothetical
protein F14D2.13 protein.
Length = 249
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +3
Query: 369 PSAHVSEPPTEPQGTHISRLYPELLALIFERLPVRDRGRAAQVCRAWRDAAD 524
P SEPPT +S + E+L I E L +R +VCR RDA D
Sbjct: 45 PETFFSEPPT------LSDMSMEVLGKIVENLDPFNRLSVRKVCRKLRDAID 90
>Z82282-4|CAB05276.1| 485|Caenorhabditis elegans Hypothetical
protein T07G12.4 protein.
Length = 485
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 469 CETGAELHKFVARGGTQLIEDLFGVA*KPLCIYGDLLLYCL 591
C A K G + I+D+FG K + G L+ +CL
Sbjct: 369 CTIPAHFEKSPLHSGNKTIDDIFGTLLKMRMLVGGLIAFCL 409
>Z82282-2|CAB05274.2| 544|Caenorhabditis elegans Hypothetical
protein T07G12.2 protein.
Length = 544
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 469 CETGAELHKFVARGGTQLIEDLFGVA*KPLCIYGDLLLYCL 591
C A K G + I+D+FG K + G L+ +CL
Sbjct: 431 CTIPAHFEKSPLHSGNKTIDDIFGTLLKMRMLVGGLIAFCL 471
>U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redundant
with protein 1 protein.
Length = 936
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 399 EPQGTHISRLYPELLALIFERLPVRDRGRAAQVCRAWRDAADRRSVWRGVKAALH 563
E Q HI+RL ELL +F LP + + V + ++ VW+ + L+
Sbjct: 156 EDQQDHINRLPEELLLKVFSFLPDKSLLACSSVSYRFNQISNSHEVWKELYCNLY 210
>AC006714-11|AAN65282.3| 306|Caenorhabditis elegans F-box a protein
protein 61 protein.
Length = 306
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 450 IFERLPVRDRGRAAQVCRAWRDAADRRSV 536
IFE+L DR R+ +VCR R A D+ V
Sbjct: 21 IFEKLEPMDRLRSRKVCRVLRAAMDKLGV 49
>Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +3
Query: 300 ELPSTTTRRKHRSAPYRLHRPHLPSAHVSEPPTEPQGTHISRLYPELLALIFE 458
++ S TT + S PY H P+ +E PT G + PE +A FE
Sbjct: 29 DVSSFTTTSESTSPPYSSSEHHSPTDQRTETPTSDSGN--ASFSPENVATSFE 79
>Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +3
Query: 300 ELPSTTTRRKHRSAPYRLHRPHLPSAHVSEPPTEPQGTHISRLYPELLALIFE 458
++ S TT + S PY H P+ +E PT G + PE +A FE
Sbjct: 29 DVSSFTTTSESTSPPYSSSEHHSPTDQRTETPTSDSGN--ASFSPENVATSFE 79
>Z72507-1|CAA96633.2| 172|Caenorhabditis elegans Hypothetical
protein F17C11.1 protein.
Length = 172
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 524 SKICLAWRKSRSASTETCSCTVCIL 598
SK W + +A+ CSCT C+L
Sbjct: 85 SKCVFKWAFATTAAATACSCTCCLL 109
>AL032647-5|CAA21693.1| 370|Caenorhabditis elegans Hypothetical
protein Y57A10B.6 protein.
Length = 370
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +3
Query: 171 PIHTSFSENRSDAS*HVKVCSVATMSAWTEEMLSWRDERLGLTELPSTTTRRKHRSAPYR 350
PIH F+ NR + + + A EEM+S E +G ELP R+ +
Sbjct: 191 PIHGDFTHNRMEIE---MIFLAQCIKAGNEEMISTAIEFVGTDELPLEFYRKYDIALSCH 247
Query: 351 LHRP 362
L+ P
Sbjct: 248 LYCP 251
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,867,554
Number of Sequences: 27780
Number of extensions: 328541
Number of successful extensions: 979
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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