Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7j05
         (337 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF174603-1|AAF04524.1|  123|Homo sapiens F-box protein Fbx23 pro...    28   8.2  

>AF174603-1|AAF04524.1|  123|Homo sapiens F-box protein Fbx23
           protein.
          Length = 123

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -3

Query: 335 LWVVVGLLYRCAGQS*VWSISIIFKENTICILYIGRHIGLLF 210
           +W+V G   R  G    W+     +ENT  + +    +GL+F
Sbjct: 76  VWLVCGSWRRHVGAGLCWAAIGALRENTFLLKFFXXFLGLIF 117


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,189,936
Number of Sequences: 237096
Number of extensions: 637605
Number of successful extensions: 1324
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)