Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7i22
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical pr... 32 0.41
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 31 0.71
AF039046-12|AAB94215.1| 299|Caenorhabditis elegans Hydroxy-acyl... 31 0.94
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 31 0.94
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 30 1.2
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 30 1.2
U88173-8|AAK21380.1| 267|Caenorhabditis elegans C.elegans y-box... 29 2.2
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 29 2.2
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical pr... 29 3.8
U50199-2|AAP46272.1| 169|Caenorhabditis elegans Pharyngeal enha... 29 3.8
U50199-1|AAA91262.1| 427|Caenorhabditis elegans Pharyngeal enha... 29 3.8
AF160187-1|AAD42897.1| 425|Caenorhabditis elegans pharyngeal en... 29 3.8
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 28 5.0
U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical pr... 28 5.0
U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical pr... 28 5.0
AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin p... 28 5.0
AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin p... 28 5.0
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 28 6.6
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 28 6.6
>U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical
protein T20F5.5 protein.
Length = 226
Score = 31.9 bits (69), Expect = 0.41
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 448 KSADIKVEEPAAQPEDSK-TEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA 624
KSA K+ P+ + ED++ T+ A+ E S + KP T E SAD + ++ + LA
Sbjct: 66 KSASKKLRVPSKESEDTQPTKSDASQTEKSTK-KPPVTLVESSADVTTAVESISSQQQLA 124
Query: 625 P 627
P
Sbjct: 125 P 125
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 31.1 bits (67), Expect = 0.71
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 463 KVEEPAAQP-EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTV 633
K+EE A + E+ K ++Q+ A D S D +IP VK I PT+
Sbjct: 435 KLEEHAVKKLEEEKDKLQSAAAPEDDSPASPPMDCPASPDMVPVIPQTVKIIPTVPTI 492
>AF039046-12|AAB94215.1| 299|Caenorhabditis elegans
Hydroxy-acyl-coa dehydrogenaseprotein 1 protein.
Length = 299
Score = 30.7 bits (66), Expect = 0.94
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = +1
Query: 418 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 597
K + I A K D+ +E PAA E + ++Q + +I + +A DA + + A+
Sbjct: 54 KKNLIRVASKKKTDVPME-PAALEEIA--QIQLDLLQIHTDIPSAAEDAAMAIE--AVAE 108
Query: 598 NMVKKIDLAPTVEKRC 645
N+ K+D+ T++K C
Sbjct: 109 NLDLKLDIFQTIQKTC 124
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 30.7 bits (66), Expect = 0.94
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = +1
Query: 418 KSSEIPDAEAKSADIKV-----EEPAAQPEDSKTEVQATVAEISKEEKPSATD 561
KS E P E K ++ V +EPAA E+ K + V E KEE P++++
Sbjct: 126 KSEEAPAPEEKKSEEVVAAEEKKEPAAVVEEKKEVPETPVVEDKKEEAPASSE 178
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +1
Query: 439 AEAKSADIKVEEPAAQPEDSKTEVQ----ATVAEISKEEKPSATDAEGSADSAAIIPNMV 606
A A+SA VEE AA E ++ V+ AT A S E+P A +A+S P
Sbjct: 610 APAESAPASVEE-AAPSESTQAPVEEHKDATTAADSSHEEPKAESDAPAAESVETAPVEE 668
Query: 607 KKIDLAPT 630
K + +PT
Sbjct: 669 HKDEASPT 676
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 466 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 612
VEEP P KT + A + PSA + GS+ + N +KK
Sbjct: 235 VEEPIPPPNTRKTLLGEPPAGAASSSSPSAQSSTGSSTGTSSYQNNIKK 283
>U88173-8|AAK21380.1| 267|Caenorhabditis elegans C.elegans y-box
protein 2 protein.
Length = 267
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +1
Query: 424 SEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNM 603
+ + E++S D K +E +A E K Q +++ K A +ADS+A+ +
Sbjct: 162 ASVDGEESQSTDAKPQEMSADAEKKKPRKQRK--NRNRKSKAQQKGAGDAADSSAVTESS 219
Query: 604 VKKIDLAPTVEKRC 645
D+A K C
Sbjct: 220 ESASDVASPDSKSC 233
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 415 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSA 576
A+ E +A A+ A + EEP A E++ E + +EEKP A E A
Sbjct: 21 AEEVEEEEAAAEDAAAEEEEPEAAEEEAPVEEKPKPRPPVQEEKPPAEMTEAEA 74
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 29.5 bits (63), Expect = 2.2
Identities = 27/111 (24%), Positives = 40/111 (36%)
Frame = +1
Query: 295 SNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEE 474
+++ PA EA D A ++ A A SS +P+ A E
Sbjct: 504 ASEPAPAPIEAPATDAATLETAPAPAAEPAPAAEAAAGYDAPSS-VPEETPAPAPAADET 562
Query: 475 PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 627
PA P +T A AE + P+A + +A +A P D P
Sbjct: 563 PAPAPAAEETPAPAPAAEETPAPAPAAEETPATAPAAEETPAPAPAADETP 613
>Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 484 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 627
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 484 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 627
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>U50199-2|AAP46272.1| 169|Caenorhabditis elegans Pharyngeal
enhancer binding protein1, isoform b protein.
Length = 169
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 541 EKPSATD-AEGSADSAAIIPNMVKKIDLAPTVEKR 642
EKP ++D + S D++AI P V + L+P EK+
Sbjct: 5 EKPGSSDISSSSTDTSAISPISVSSMPLSPDKEKK 39
>U50199-1|AAA91262.1| 427|Caenorhabditis elegans Pharyngeal
enhancer binding protein1, isoform a protein.
Length = 427
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 541 EKPSATD-AEGSADSAAIIPNMVKKIDLAPTVEKR 642
EKP ++D + S D++AI P V + L+P EK+
Sbjct: 5 EKPGSSDISSSSTDTSAISPISVSSMPLSPDKEKK 39
>AF160187-1|AAD42897.1| 425|Caenorhabditis elegans pharyngeal
enhancer binding protein-1 protein.
Length = 425
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 541 EKPSATD-AEGSADSAAIIPNMVKKIDLAPTVEKR 642
EKP ++D + S D++AI P V + L+P EK+
Sbjct: 3 EKPGSSDISSSSTDTSAISPISVSSMPLSPDKEKK 37
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Frame = +1
Query: 418 KSSEIPDAEAKSADIKV--------EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGS 573
K SEIPD + +KV E+P + PE+S+ E ++K++K + S
Sbjct: 2869 KGSEIPDEDENGESVKVMKRKEYQIEKPQSMPEESEDE---EFKLLTKKKKMGVIANDPS 2925
Query: 574 ADSAAIIPNMVKK 612
D + II KK
Sbjct: 2926 NDGSEIIKMSKKK 2938
>U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical
protein PAR2.4b protein.
Length = 606
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 148 VSLAMPVAEEKDVVPAQPIL 207
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical
protein PAR2.4a protein.
Length = 804
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 148 VSLAMPVAEEKDVVPAQPIL 207
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin
polymerizing factor-S protein.
Length = 606
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 148 VSLAMPVAEEKDVVPAQPIL 207
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin
polymerizing factor protein.
Length = 804
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 148 VSLAMPVAEEKDVVPAQPIL 207
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 427 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 567
E + E + + K+EEPAA+ E+ + E + E EE+ + E
Sbjct: 347 EPEEEEEEEEEEKIEEPAAKEEEEEEEEEEEEEEEELEEEEEEEEEE 393
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 434 PMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFQ 535
P L N+LI WK + K ++ KY + LK Q
Sbjct: 199 PKLSLNVLISMWKKEFSDWKDEEFKYFIDFLKSQ 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.130 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,618,998
Number of Sequences: 27780
Number of extensions: 187600
Number of successful extensions: 711
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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