Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7i13
         (660 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58750-4|AAB00644.1|  309|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z49909-15|CAF31470.1|  697|Caenorhabditis elegans Hypothetical p...    29   2.9  
Z49909-14|CAA90116.2|  717|Caenorhabditis elegans Hypothetical p...    29   2.9  
Z70287-2|CAA94298.2|  700|Caenorhabditis elegans Hypothetical pr...    28   5.1  
AL022271-1|CAA18349.1|  919|Caenorhabditis elegans Hypothetical ...    28   5.1  
U13019-10|AAC24442.1|  757|Caenorhabditis elegans Hypothetical p...    28   6.8  

>U58750-4|AAB00644.1|  309|Caenorhabditis elegans Hypothetical
           protein F55G1.5 protein.
          Length = 309

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -3

Query: 187 VNKTPIMRRGNNFEGVGQYCFRVLNDTGSHCYANAGVVRLLVL 59
           V KT I   G+N+ G+    +R+L D G        + R++V+
Sbjct: 239 VVKTRIQTGGSNYNGIFHAFYRILADEGVKALFKGAICRMMVM 281


>Z49909-15|CAF31470.1|  697|Caenorhabditis elegans Hypothetical
           protein C14A4.12b protein.
          Length = 697

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 18/47 (38%), Positives = 27/47 (57%)
 Frame = -3

Query: 316 SRLLDFNFIRFSSLNSLMLPMGSINEL*IHWARFVYIRFNHQFVNKT 176
           S L  FNFI  +   SL+L + SIN   +H   F+Y++ N  F++ T
Sbjct: 415 SVLSKFNFITIAI--SLVLGIFSINATYLHIFSFIYLQKNGYFIDGT 459


>Z49909-14|CAA90116.2|  717|Caenorhabditis elegans Hypothetical
           protein C14A4.12a protein.
          Length = 717

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 18/47 (38%), Positives = 27/47 (57%)
 Frame = -3

Query: 316 SRLLDFNFIRFSSLNSLMLPMGSINEL*IHWARFVYIRFNHQFVNKT 176
           S L  FNFI  +   SL+L + SIN   +H   F+Y++ N  F++ T
Sbjct: 435 SVLSKFNFITIAI--SLVLGIFSINATYLHIFSFIYLQKNGYFIDGT 479


>Z70287-2|CAA94298.2|  700|Caenorhabditis elegans Hypothetical
           protein R09E10.3 protein.
          Length = 700

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +2

Query: 422 ERSCLGSLMAIPGRGDVPR-DPEEVLNDAKDFLGQYFASIRRANTPAHEARWKIVQEE 592
           ER CL S   I  R    R DP+ +++D +    + FA++ R     H+A  K VQ++
Sbjct: 317 ERLCLLSNFMIGSRIGFSRGDPKLLVDDVQALAPRSFATVPRVIDKIHKAVMKQVQDK 374


>AL022271-1|CAA18349.1|  919|Caenorhabditis elegans Hypothetical
           protein F32F2.1 protein.
          Length = 919

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -3

Query: 202 FNHQFVNKTPIM-RRGNNFEGVGQYCFRVLNDTGS 101
           FN   +N TP+M RR +   GV Q  +R+L+   S
Sbjct: 38  FNANSINATPVMRRRRSQMSGVRQRNYRILDQNES 72


>U13019-10|AAC24442.1|  757|Caenorhabditis elegans Hypothetical
           protein T12A2.2 protein.
          Length = 757

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 629 LLWLVGMCQS*LLPLVRFSSELHELEYW 546
           L W VG   S L  +VRF S +HE + W
Sbjct: 27  LAWFVGFA-SRLFAIVRFESIIHEFDPW 53


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,396,226
Number of Sequences: 27780
Number of extensions: 283163
Number of successful extensions: 706
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)