Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7i06
(625 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029052-1|AAH29052.1| 551|Homo sapiens regulator of chromosome... 37 0.050
AY341245-1|AAP88928.1| 551|Homo sapiens chromosome condensation... 37 0.050
AL157813-1|CAH70795.1| 551|Homo sapiens regulator of chromosome... 37 0.050
AF060219-1|AAC79987.1| 551|Homo sapiens RCC1-like G exchanging ... 37 0.050
AB209543-1|BAD92780.1| 556|Homo sapiens RCC1-like G exchanging ... 37 0.050
BC030020-1|AAH30020.1| 600|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 33 1.1
AB046815-1|BAB13421.1| 471|Homo sapiens KIAA1595 protein protein. 33 1.1
BC121064-1|AAI21065.1| 735|Homo sapiens SALF protein protein. 30 7.6
BC121063-1|AAI21064.1| 735|Homo sapiens SALF protein protein. 30 7.6
BC101774-1|AAI01775.1| 1182|Homo sapiens stoned B/TFIIA-alpha/be... 30 7.6
BC101772-1|AAI01773.1| 1182|Homo sapiens stoned B/TFIIA-alpha/be... 30 7.6
AY026319-1|AAK11719.1| 735|Homo sapiens stoned B-like factor SB... 30 7.6
AF255310-1|AAK57559.1| 735|Homo sapiens stonin 1 protein. 30 7.6
AF026169-1|AAD39617.1| 1182|Homo sapiens SALF protein. 30 7.6
AC073082-2|AAY15064.1| 1182|Homo sapiens unknown protein. 30 7.6
>BC029052-1|AAH29052.1| 551|Homo sapiens regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing pro
protein.
Length = 551
Score = 37.1 bits (82), Expect = 0.050
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 523 GILPSYIDTSHCNGHIIDVACGYEHYMLLTSTG 621
G++P +I T+ N +I+VACG H ++LTS G
Sbjct: 139 GLVPCHISTNLSNKQVIEVACGSYHSLVLTSDG 171
>AY341245-1|AAP88928.1| 551|Homo sapiens chromosome condensation
1-like protein.
Length = 551
Score = 37.1 bits (82), Expect = 0.050
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 523 GILPSYIDTSHCNGHIIDVACGYEHYMLLTSTG 621
G++P +I T+ N +I+VACG H ++LTS G
Sbjct: 139 GLVPCHISTNLSNKQVIEVACGSYHSLVLTSDG 171
>AL157813-1|CAH70795.1| 551|Homo sapiens regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing pro
protein.
Length = 551
Score = 37.1 bits (82), Expect = 0.050
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 523 GILPSYIDTSHCNGHIIDVACGYEHYMLLTSTG 621
G++P +I T+ N +I+VACG H ++LTS G
Sbjct: 139 GLVPCHISTNLSNKQVIEVACGSYHSLVLTSDG 171
>AF060219-1|AAC79987.1| 551|Homo sapiens RCC1-like G exchanging
factor RLG protein.
Length = 551
Score = 37.1 bits (82), Expect = 0.050
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 523 GILPSYIDTSHCNGHIIDVACGYEHYMLLTSTG 621
G++P +I T+ N +I+VACG H ++LTS G
Sbjct: 139 GLVPCHISTNLSNKQVIEVACGSYHSLVLTSDG 171
>AB209543-1|BAD92780.1| 556|Homo sapiens RCC1-like G exchanging
factor RLG variant protein.
Length = 556
Score = 37.1 bits (82), Expect = 0.050
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 523 GILPSYIDTSHCNGHIIDVACGYEHYMLLTSTG 621
G++P +I T+ N +I+VACG H ++LTS G
Sbjct: 144 GLVPCHISTNLSNKQVIEVACGSYHSLVLTSDG 176
>BC030020-1|AAH30020.1| 600|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 55 protein.
Length = 600
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/41 (34%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +1
Query: 331 IGHNNSSALWILNLEDNSIKNVYLDRELPL-ELSPKRNKTD 450
IGH S+ +++L +E++ I + ++++ PL E+ P+RN D
Sbjct: 362 IGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTAD 402
>AB046815-1|BAB13421.1| 471|Homo sapiens KIAA1595 protein protein.
Length = 471
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/41 (34%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +1
Query: 331 IGHNNSSALWILNLEDNSIKNVYLDRELPL-ELSPKRNKTD 450
IGH S+ +++L +E++ I + ++++ PL E+ P+RN D
Sbjct: 233 IGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTAD 273
>BC121064-1|AAI21065.1| 735|Homo sapiens SALF protein protein.
Length = 735
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 409 ELPLELSPKRNKTDNEIQKLVVNNFSCLYLTKGKNVYSGILPSYIDTSHCNGHI 570
+LP PK+N + EI +V+NF +GK V S ++ NG++
Sbjct: 399 KLPAVSKPKKNYEEQEISLEIVDNFWGKVTKEGKFVESAVITQIYCLCFVNGNL 452
>BC121063-1|AAI21064.1| 735|Homo sapiens SALF protein protein.
Length = 735
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 409 ELPLELSPKRNKTDNEIQKLVVNNFSCLYLTKGKNVYSGILPSYIDTSHCNGHI 570
+LP PK+N + EI +V+NF +GK V S ++ NG++
Sbjct: 399 KLPAVSKPKKNYEEQEISLEIVDNFWGKVTKEGKFVESAVITQMYCLCFVNGNL 452
>BC101774-1|AAI01775.1| 1182|Homo sapiens stoned
B/TFIIA-alpha/beta-like factor protein.
Length = 1182
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 409 ELPLELSPKRNKTDNEIQKLVVNNFSCLYLTKGKNVYSGILPSYIDTSHCNGHI 570
+LP PK+N + EI +V+NF +GK V S ++ NG++
Sbjct: 399 KLPAVSKPKKNYEEQEISLEIVDNFWGKVTKEGKFVESAVITQIYCLCFVNGNL 452
>BC101772-1|AAI01773.1| 1182|Homo sapiens stoned
B/TFIIA-alpha/beta-like factor protein.
Length = 1182
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 409 ELPLELSPKRNKTDNEIQKLVVNNFSCLYLTKGKNVYSGILPSYIDTSHCNGHI 570
+LP PK+N + EI +V+NF +GK V S ++ NG++
Sbjct: 399 KLPAVSKPKKNYEEQEISLEIVDNFWGKVTKEGKFVESAVITQIYCLCFVNGNL 452
>AY026319-1|AAK11719.1| 735|Homo sapiens stoned B-like factor SBLF
protein.
Length = 735
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 409 ELPLELSPKRNKTDNEIQKLVVNNFSCLYLTKGKNVYSGILPSYIDTSHCNGHI 570
+LP PK+N + EI +V+NF +GK V S ++ NG++
Sbjct: 399 KLPAVSKPKKNYEEQEISLEIVDNFWGKVTKEGKFVESAVITQIYCLCFVNGNL 452
>AF255310-1|AAK57559.1| 735|Homo sapiens stonin 1 protein.
Length = 735
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 409 ELPLELSPKRNKTDNEIQKLVVNNFSCLYLTKGKNVYSGILPSYIDTSHCNGHI 570
+LP PK+N + EI +V+NF +GK V S ++ NG++
Sbjct: 399 KLPAVSKPKKNYEEQEISLEIVDNFWGKVTKEGKFVESAVITQIYCLCFVNGNL 452
>AF026169-1|AAD39617.1| 1182|Homo sapiens SALF protein.
Length = 1182
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 409 ELPLELSPKRNKTDNEIQKLVVNNFSCLYLTKGKNVYSGILPSYIDTSHCNGHI 570
+LP PK+N + EI +V+NF +GK V S ++ NG++
Sbjct: 399 KLPAVSKPKKNYEEQEISLEIVDNFWGKVTKEGKFVESAVITQIYCLCFVNGNL 452
>AC073082-2|AAY15064.1| 1182|Homo sapiens unknown protein.
Length = 1182
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 409 ELPLELSPKRNKTDNEIQKLVVNNFSCLYLTKGKNVYSGILPSYIDTSHCNGHI 570
+LP PK+N + EI +V+NF +GK V S ++ NG++
Sbjct: 399 KLPAVSKPKKNYEEQEISLEIVDNFWGKVTKEGKFVESAVITQIYCLCFVNGNL 452
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,310,383
Number of Sequences: 237096
Number of extensions: 1839476
Number of successful extensions: 7337
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7330
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -