Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7i06
         (625 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3098|AAF55956.1|  444|Drosophila melanogaster CG13407-P...    30   2.2  
AY075262-1|AAL68129.1|  656|Drosophila melanogaster AT22312p pro...    29   5.1  

>AE014297-3098|AAF55956.1|  444|Drosophila melanogaster CG13407-PA
           protein.
          Length = 444

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -1

Query: 433 WAIIQEAILYPNKHSLCYYLPNSISKGHSNYCGQ 332
           +A  Q    YPN +   +YLP    +GH  Y GQ
Sbjct: 29  YAQTQRVHYYPNHYYPSHYLPGHYHQGHQGYQGQ 62


>AY075262-1|AAL68129.1|  656|Drosophila melanogaster AT22312p
           protein.
          Length = 656

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
 Frame = +1

Query: 376 DNSIKN--VYLDRELPLELSPKRNKT-DNEIQKLVVNNFSCLYLTKGKNVYSGILPSYID 546
           D S++   VYLDR+     S +R  T DN  + LV ++    YL + ++ YS     Y D
Sbjct: 112 DTSVRTTPVYLDRQADFVGSTRRQVTEDNRRELLVCHDMMGNYL-EDRHFYSS--QKYDD 168

Query: 547 TSHCNGHIIDVACGYEH-YMLLTSTGY 624
               +   +D  C + H Y+ +   G+
Sbjct: 169 YRFVHWSAVDYFCYFSHDYVTIPPCGW 195


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,595,921
Number of Sequences: 53049
Number of extensions: 544013
Number of successful extensions: 1439
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1439
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)