Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7i06
         (625 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF078157-17|AAG24072.1| 1062|Caenorhabditis elegans Hypothetical...    28   6.2  
AF162674-1|AAF80462.1|  575|Caenorhabditis elegans CNT-like nucl...    27   8.2  
AF016413-3|AAB65256.3|  555|Caenorhabditis elegans Hypothetical ...    27   8.2  
AB038044-1|BAB62394.1|  852|Caenorhabditis elegans N-deacetylase...    27   8.2  
AB037942-1|BAB61757.1|  814|Caenorhabditis elegans N-deacetylase...    27   8.2  
AB037941-1|BAB61756.1|  826|Caenorhabditis elegans N-deactylase/...    27   8.2  

>AF078157-17|AAG24072.1| 1062|Caenorhabditis elegans Hypothetical
            protein F25E5.1 protein.
          Length = 1062

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +1

Query: 163  RLANLMQINWSYNIFQLRKNLYLLGAFDGRKIAKKIDIPEECRKSP 300
            +L  L  I++  N  +  KN  +L  F  R+I ++ + P+E  +SP
Sbjct: 986  KLTELFNIDFPVNGPKKSKNQMMLITFPSREIVEEEEPPQEAEQSP 1031


>AF162674-1|AAF80462.1|  575|Caenorhabditis elegans CNT-like
           nucleoside transporter protein.
          Length = 575

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +1

Query: 409 ELPLELSPKRNK-TDNEIQKLVVNNFSCLYLTK-GKNVYSGILPSYIDTSHCNGHIIDVA 582
           E PL ++P   K TD+EI  +V + F+C+  T     V  G  P Y+ T+      + +A
Sbjct: 316 EAPLMVAPYIEKLTDSEIFAIVTSGFACVAGTVFTAYVALGACPIYLLTASLLSAPMSLA 375

Query: 583 C 585
           C
Sbjct: 376 C 376


>AF016413-3|AAB65256.3|  555|Caenorhabditis elegans Hypothetical
           protein F27E11.2a protein.
          Length = 555

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +1

Query: 409 ELPLELSPKRNK-TDNEIQKLVVNNFSCLYLTK-GKNVYSGILPSYIDTSHCNGHIIDVA 582
           E PL ++P   K TD+EI  +V + F+C+  T     V  G  P Y+ T+      + +A
Sbjct: 296 EAPLMVAPYIEKLTDSEIFAIVTSGFACVAGTVFTAYVALGACPIYLLTASLLSAPMSLA 355

Query: 583 C 585
           C
Sbjct: 356 C 356


>AB038044-1|BAB62394.1|  852|Caenorhabditis elegans
           N-deacetylase/N-sulfotransferase protein.
          Length = 852

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
 Frame = -3

Query: 194 DQLICIKLANLKSKFGSSDLDILRNSEK-----KSRSSNH*LNKFEPAT*YSIVVVNNKH 30
           D  I + L +L S+ G + + IL NS+K     ++ S N  +        YS++++ N +
Sbjct: 75  DARILVILDSLFSRHGKTIIQIL-NSQKLQFKAEAVSKNLPVLTTSRRGRYSLIIIENYY 133

Query: 29  RYYTITQWS 3
           +Y  + QW+
Sbjct: 134 KYLNMAQWN 142


>AB037942-1|BAB61757.1|  814|Caenorhabditis elegans
           N-deacetylase/N-sulfotransferase protein.
          Length = 814

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
 Frame = -3

Query: 194 DQLICIKLANLKSKFGSSDLDILRNSEK-----KSRSSNH*LNKFEPAT*YSIVVVNNKH 30
           D  I + L +L S+ G + + IL NS+K     ++ S N  +        YS++++ N +
Sbjct: 37  DARILVILDSLFSRHGKTIIQIL-NSQKLQFKAEAVSKNLPVLTTSRRGRYSLIIIENYY 95

Query: 29  RYYTITQWS 3
           +Y  + QW+
Sbjct: 96  KYLNMAQWN 104


>AB037941-1|BAB61756.1|  826|Caenorhabditis elegans
           N-deactylase/N-sulfotransferase protein.
          Length = 826

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
 Frame = -3

Query: 194 DQLICIKLANLKSKFGSSDLDILRNSEK-----KSRSSNH*LNKFEPAT*YSIVVVNNKH 30
           D  I + L +L S+ G + + IL NS+K     ++ S N  +        YS++++ N +
Sbjct: 49  DARILVILDSLFSRHGKTIIQIL-NSQKLQFKAEAVSKNLPVLTTSRRGRYSLIIIENYY 107

Query: 29  RYYTITQWS 3
           +Y  + QW+
Sbjct: 108 KYLNMAQWN 116


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,088,205
Number of Sequences: 27780
Number of extensions: 297844
Number of successful extensions: 905
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)