Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7i05
         (233 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro...    27   1.3  
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical...    27   1.3  
U58751-7|AAB00658.2|  729|Caenorhabditis elegans Hepatocyte grow...    26   3.1  
AC024828-2|AAU87812.1|  462|Caenorhabditis elegans Hypothetical ...    26   3.1  
AF077537-8|AAC26277.1|  226|Caenorhabditis elegans Hypothetical ...    26   4.1  
AF022975-2|ABD94085.1|  153|Caenorhabditis elegans Hypothetical ...    25   5.4  
U40030-6|AAA81135.3|  431|Caenorhabditis elegans Hypothetical pr...    25   7.2  
U40030-5|AAR12976.2|  506|Caenorhabditis elegans Hypothetical pr...    25   7.2  
U29613-1|AAC47060.1|   94|Caenorhabditis elegans Hypothetical pr...    25   7.2  

>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
           preproprotein protein.
          Length = 1042

 Score = 27.5 bits (58), Expect = 1.3
 Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
 Frame = -3

Query: 171 SVCNSSQTH--WSDGNGQCVLNR 109
           S C+ ++ H  W DGN QC+LN+
Sbjct: 408 SKCSVARMHGIWQDGNIQCLLNK 430


>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
           protein Y37D8A.13 protein.
          Length = 1042

 Score = 27.5 bits (58), Expect = 1.3
 Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
 Frame = -3

Query: 171 SVCNSSQTH--WSDGNGQCVLNR 109
           S C+ ++ H  W DGN QC+LN+
Sbjct: 408 SKCSVARMHGIWQDGNIQCLLNK 430


>U58751-7|AAB00658.2|  729|Caenorhabditis elegans Hepatocyte growth
           factor-regulatedtk substrate (hrs) family protein 1
           protein.
          Length = 729

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 94  SCLIVPI*NTLSVSIAPMSLGGVTNTEGS 180
           S L+ P  N+L+  IA MSLGG     G+
Sbjct: 361 STLMGPDDNSLNADIAAMSLGGTNGLNGT 389


>AC024828-2|AAU87812.1|  462|Caenorhabditis elegans Hypothetical
           protein Y55F3BL.2 protein.
          Length = 462

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 78  KQCVYVVFNCSYLEHTVRFHRSN 146
           K C +  F+  YLE +V F R N
Sbjct: 17  KNCFFFQFSAKYLEFSVNFPRKN 39


>AF077537-8|AAC26277.1|  226|Caenorhabditis elegans Hypothetical
           protein F16G10.9 protein.
          Length = 226

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 11/52 (21%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +1

Query: 55  TDLCSTKI--NSVYMSCLIVPI*NTLSVSIAPMSLGGVTNTEGSNAGGIFVQ 204
           T+ C   +  + VY+   + P+ +T++  ++ M+ GG+  +  + A  + +Q
Sbjct: 34  TECCMRMVPPDDVYIPSTLAPVESTMAPGVSTMTPGGIYTSAETEAPEVILQ 85


>AF022975-2|ABD94085.1|  153|Caenorhabditis elegans Hypothetical
           protein K09C6.10 protein.
          Length = 153

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -3

Query: 195 YSACIRSLSVCNSSQTHWSDGNGQCVLNRNN*TRHIHTV 79
           YSA + S  +CN S+    +G+ + +L R +     HT+
Sbjct: 104 YSASLMSSGICNGSKFIGCNGDARQLLGRKSQQTLTHTM 142


>U40030-6|AAA81135.3|  431|Caenorhabditis elegans Hypothetical
           protein T13C2.3a protein.
          Length = 431

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 84  CVYVVFNCSYLEHTVRFHRSNESGRSYKH*G 176
           CVY   N  +  + +  H+S +  R Y H G
Sbjct: 244 CVYRHLNNEFYRYCLLVHQSRDGDRCYHHQG 274


>U40030-5|AAR12976.2|  506|Caenorhabditis elegans Hypothetical
           protein T13C2.3b protein.
          Length = 506

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 84  CVYVVFNCSYLEHTVRFHRSNESGRSYKH*G 176
           CVY   N  +  + +  H+S +  R Y H G
Sbjct: 319 CVYRHLNNEFYRYCLLVHQSRDGDRCYHHQG 349


>U29613-1|AAC47060.1|   94|Caenorhabditis elegans Hypothetical
           protein K02A6.1 protein.
          Length = 94

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 84  CVYVVFNCSYLEHTVRFHR 140
           CV+++ + S LEH  R HR
Sbjct: 10  CVFMLTSASLLEHPCRVHR 28


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,925,214
Number of Sequences: 27780
Number of extensions: 85169
Number of successful extensions: 284
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of database: 12,740,198
effective HSP length: 57
effective length of database: 11,156,738
effective search space used: 223134760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)